Basic Information

Gene Symbol
KDM5A_1
Assembly
GCA_031216515.1
Location
JASKYO010000013.1:979273-986821[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.7e-23 4.9e-20 71.6 0.0 3 89 105 186 103 186 0.94

Sequence Information

Coding Sequence
ATGGCCGACGACGACCTCAACGAGCTCGTGGTCAACAACATGCTGAAGAACCGCAAGTACAACCCCGAGGTGTCGGACGCGTTCAGCTTCAAGCGTCCGCCCGACTGTCCCGTCTACACGCCGACGGCCGAGGAGTTCGAAAACCCCTTCGAGTACATCGCCAAAATCAGAGACGAGGCCGTGCACACGGGCATCTGCAAGATCCGCCCGCCCAAGGGTTGGGAGCCCCCATTTTGTGTGGATGTGGACAACTTCAAGTTCACGCCCAGGGTGCAGCAACTCAACGAACTGGAGgCCAAGACCAGAATCCGGCTCAATTTCATTGAGCAGATCGGCAAGTTTTGGAACTTGCAGGGCACTCCGTGCACCATTCCCATGATCGACAAACACGCCGTCGACTACTTCACCCTTTACCAAGAGGTCCAGGCAGCAgGTGGTTTGTCTCAAATCAAGAACAAGCAGTGGCTGGAAATCTGCAAGGCGTTGGGTTTTGCGCCGAAGAAGTCAATTGCCATTATTTTGAAGGACTACTACGAAAAGTATCTGCACCCGTTCGACCTCTTCAAAAAGAGCAACAACGGAAATGCAAAGcAGGAACATAAGCCTGCAAAAAGAGGAAGGCCAAGTAAGAAGAATGGAATGCACGGGAACTATTCGTTGCCAAACAGCAAGGCCAGTTCGCCGCCCAGTTCTCCGGAAAAGGAGCCCGTGGTTGAGGAGGCCGAGCTCGAGGATTATGAACGTTTCCAGTACATTGGTGGCTGTCACAAGATGGCAGGTTTTCGCACCAGGAAAAAGGAGCCAGAAGCAGCCAAAAAGCCCAGGGGAAGAAAGTCAAAGTTCAACATAGACCCCctgGCCAAGTACGTTTGCAAGAAGTGCAGCCGTGGAGATAAAGAGGACAAGATGCTCCTGTGCGACGGCTGCGACGACAGCTACCACACCTTCTGCCTGGTGCCTCCGTTGGCAGAAATACCCGAAGGAGACTGGAGGTGTCCGATTTGCGTGGACAAGGAGGTGTCGAAGCCTTTCGAGGCTTTCGGATTCGAGCAGGCCAAGCGCGAGTACTCGTTGTACGAGTTTGGCAAGATGGCCGACGAATTTAAATGCCAGTACTTCAACATGCCAGTTCATACGGTGCCTTTGGACCTGGTTGAGCGTGAGTATTGGAGGATCGTAGGCACCATTGACGAAGACGTCACAGTCGAGTACGGAGCTGATTTGCACACCCTTGACCACGGTTCGGGCTTCCCCACTCATAAATCTCACAACCTGTCCAGCCCGGAAATGCCCTATGTTCGGAGTGGGTGGAACTTAAACAACCTGCCCGTCCTCAGTGACTGCATTCTGTCCCACATTGACGCAGATATTTCGGGAATGAAGGTGCCCTGGATGTATGTGGGCATGTGCTTCTCCACCTTCTGCTGGCACAATGAAGACCACTGGTCCTACTCCATCAACTACCTCCACTGGGGTGAACCCAAAACTTGGTATGGTGTGCCTGGTGCCGCTGCGCCTGAATTTGAAGATGCAATGCGAAGCAAAGCTCCTGAACTTTTCGAGAATCAGACTGATCTTCTCCACCAACTTGTCACCATTATGAATCCCAATCTGCTCATGGAGagagGGGTGCCTGTTTTCCGCACTGACCAACAAGCTGGCGAGTTCGTCATCACATTCCCAAGGTCATACCATGCAGGCTTTAACCAGGGTTACAACTTTGCCGAGGCGGTCAACTTTGCCCCGCCTGATTGGCTCACAATGGGTCGAGAATGCATAGACCACTATGCTGAGCAGCGCCGCTACTGTGTCTTTTCACATGACGAGCTGGTCTGCAAAATGGCTTCAAAAGTCAGCAGGATGTCGGTGCCCATGGCGCTGGCCGTTTGCAAGGACATGAACGAAATGGTCCGGCTGGAGGTGGCTCTCAGGAAGGAAGTTGCTGCCCATGGCATCAAAAGCAAAGGGCATGTTCCTTTTGAGACCCTGACCGACGACGAGAGGCAGTGTGACTTTTGCCAGACGACTCTGTTTCTCTCTGCTGTCGCTTGCAAGTGTAATGATAAGAAAATGGCCTGTCTGCGGCACTTCAAGAACATGTGCAAGTGCGACGGCGGAAAGAAAACTTTGCTTTACCGCTACTTGGAATCTGAGCTGACGACCAATCTCAAGGAAATCAAGCGTTCCTTAGAGGAATACATGATCTGGTTCAAGAATGTCCaggaaattgtatttttagaaaaatctgACAAGCCAGAATTGTCTGAGCTTGTAGAACTAGATCAAGAAGGCCGAAAAAGGAAATACCCTCAGAATTCGGCCTATCTAGCATTTAAAGAGGCCATTAAGGAAGGAGAAACTACGATTAATTTATGTGACCAGCTCATAGCTCGAAGAGATGCCCAAGGGCTTGGTGATTTTCCCTCAGAGGATAAGCTGCAGGAGAATGAGCTGAAGGAGCTGGCTTCCAAGGTTTCTTTCTTGTGCTGCAAAGTGGCACACAGCTACATTCTAGAAGACACCCTTGCCGAGGTTGAAAAGTTCCACGCAGCTGCAGAGAAAATTATGCAGTCTGAAGAAGACATACCGACCAAAGAGTTGCTTGCCATTGTCAAAAGGGGCAAAACCATGGTTGTCTGGCTCCCTGAAATGCCTCAGTTAGAACAAAAACTGAAACAAGCACAGTGGCTGGACCGTGTAAGGAGTCTGGAAAGCTGCAGTCCCCCTAGCACAGAGAAAGAAGTGCGAGAACTTCTGGAGGAGGTTGAGCTCCTCCTTCCTACACCAGCTGTTGAAAATTCTATAGGGCTGTTGAAACTACTCTTGGACAGAGTAACTTCCTGGAACAGAGCGGCTAAAACAGGACTTAATAATAAGCCGACAATAAAGAAACTCGAGAAGCTAGTCAGCGAGGCAGAAAGTATTCCAGTCCACTTGCCTGACCTTTCGTCAGTGAAAGACCTTGTGAAGAAAGGCCGCGATTGGATGAACAAGTACCGAACCATGAAATCCACCGAACACCCCTATCTAGAGCAGATGGACATTCTGGTCAACATTGGCCGAAACTTGCAGGTCCACCTGGACCCTCTTGGTGCCCTCGAGGACGAGTCGATAAAGGCCCGAGGCTGGCTCGAGAAGGCCAGTCGCATTTTCCTCAAGAAAAACTCTCAGCTCAAGCTGATTGAGGCGTTGAACCCAAGGAAAATCGTCGGCATCCAGAGCAACAAGGGCAAGAGGAAAAAACTAGACTCATTTACTGAGAAAAGTTTGGACGAACCTCCTCTCGACAATGAAACCATTTTTGCAAACTTCCtgcAAGCTAAGCAGAGGGAAGTCCAACTGATGATAACTCTGCGAGAGAAGAACCTGCTGAAGCGGACTGCTGAGGGCGGCGACGCCAAATTCTGCATTTGCAACAAACCTTGTGCTGGGAACATGCTCGACTGCGAACTGTGCAAGGAACTCTACCATCCTAAGTGCCTGTTGAACAGCAAGCTGACTGGCAAAGGCAGGTCAGCGATTCTGCAGCAGCCAGGCGAGAGTCAAACCAAGTACCTCTGTCCCACCTGTCTCCGGACGCGGCGTCCGCGCATTGAGACTGTCCTGCCGCTGCTGGTCGACCTGACCAAGCTGCCGGCGCGCCTGCACGAGGGTGAGACCCTGCAGTGCCTGACTGAAAACGCCATTCACTGGCAGGAGAAGGCCAAGGCGGCGCTGGCCAACGAGGAGGTTGCCTCCGCCCTTGCCAAGTTGTCGGTCATGAACCAGCGGGTCTTGGAGGCCGAGGCTCGACGCAAGACAGAGCGCATCATAAGCAGTGAACTGAAGAAGGCGGCCAACAACCCGGAGCTGCAGAACCAGCTGCCTTTGATGCCACCGATGGCCAATGTTGACGATATGCCAGGAACAGATatTACTAACAATATGCCTAAAGAGGAATATGATCTAGATTGCGATTTAGAAAAGATGAAAGGCTCCAACAACTCCGACCACGCCTATTCATCAATGAATATTGCTCGACTGAAGCACAGCAGGAAATCTCCTCTGGTGCCGCGCCACCCACCAACAACCCTTCACCTTCAGGAGAGCACTCGCTTCATGCTGGAGTCCCTGATGATGGAGGGAGACCTGCTTGAAGTGTCTCTCGACGAAACCCACCACATCTGGCGCATTCTGCACGCCAGCAACCCTGTTCAGAAGCAGAATTTTGAAaaaaataatccgGACTTGGCTGAGAGCAAGCAGAATTTGCAACCGCTGGATCTGTTGGAGAAACCAAAACCAAAGCCCAGAAAGCCGAGGGAACCAGGCGTCAAGAATAAGCTGAGGGTTGTCCTCGGAGCAAACAAGGAAAAGCTGCCGAGGAAGCCAATGGTTGGAAGAAAGGGTAAGAGAAAGGTTGATGGTGAAGAGGATGATGTGAAGCCAGTAAAGAAGTGGAGGAAGATGAAAGCGAAAGATGTTTCGGCTAGCGAGTCTGAGGAGGCAGACGCTGAGGAACGCTGCAATTCCGACACCTGCGTTCGGCCGAGTGgggATGAAGTTAATTGGGTACAGTGCGACGGCTGCTCCGAGTGGTTCCATCTGATCTGCGAAGGACTCAGCAAGGCAGACGTCAACTCGACAGACGAATACATCTGCAGGTCTTGCCATAAGTTGTCCTTGGCCATCGACGCAGACCCCAAATTGGAGCCCAAAGAGGAGGAGGAGGAAACTACCACAACCAAAGTTGAGTGGACAGATCTGGGAGTGTGA
Protein Sequence
MADDDLNELVVNNMLKNRKYNPEVSDAFSFKRPPDCPVYTPTAEEFENPFEYIAKIRDEAVHTGICKIRPPKGWEPPFCVDVDNFKFTPRVQQLNELEAKTRIRLNFIEQIGKFWNLQGTPCTIPMIDKHAVDYFTLYQEVQAAGGLSQIKNKQWLEICKALGFAPKKSIAIILKDYYEKYLHPFDLFKKSNNGNAKQEHKPAKRGRPSKKNGMHGNYSLPNSKASSPPSSPEKEPVVEEAELEDYERFQYIGGCHKMAGFRTRKKEPEAAKKPRGRKSKFNIDPLAKYVCKKCSRGDKEDKMLLCDGCDDSYHTFCLVPPLAEIPEGDWRCPICVDKEVSKPFEAFGFEQAKREYSLYEFGKMADEFKCQYFNMPVHTVPLDLVEREYWRIVGTIDEDVTVEYGADLHTLDHGSGFPTHKSHNLSSPEMPYVRSGWNLNNLPVLSDCILSHIDADISGMKVPWMYVGMCFSTFCWHNEDHWSYSINYLHWGEPKTWYGVPGAAAPEFEDAMRSKAPELFENQTDLLHQLVTIMNPNLLMERGVPVFRTDQQAGEFVITFPRSYHAGFNQGYNFAEAVNFAPPDWLTMGRECIDHYAEQRRYCVFSHDELVCKMASKVSRMSVPMALAVCKDMNEMVRLEVALRKEVAAHGIKSKGHVPFETLTDDERQCDFCQTTLFLSAVACKCNDKKMACLRHFKNMCKCDGGKKTLLYRYLESELTTNLKEIKRSLEEYMIWFKNVQEIVFLEKSDKPELSELVELDQEGRKRKYPQNSAYLAFKEAIKEGETTINLCDQLIARRDAQGLGDFPSEDKLQENELKELASKVSFLCCKVAHSYILEDTLAEVEKFHAAAEKIMQSEEDIPTKELLAIVKRGKTMVVWLPEMPQLEQKLKQAQWLDRVRSLESCSPPSTEKEVRELLEEVELLLPTPAVENSIGLLKLLLDRVTSWNRAAKTGLNNKPTIKKLEKLVSEAESIPVHLPDLSSVKDLVKKGRDWMNKYRTMKSTEHPYLEQMDILVNIGRNLQVHLDPLGALEDESIKARGWLEKASRIFLKKNSQLKLIEALNPRKIVGIQSNKGKRKKLDSFTEKSLDEPPLDNETIFANFLQAKQREVQLMITLREKNLLKRTAEGGDAKFCICNKPCAGNMLDCELCKELYHPKCLLNSKLTGKGRSAILQQPGESQTKYLCPTCLRTRRPRIETVLPLLVDLTKLPARLHEGETLQCLTENAIHWQEKAKAALANEEVASALAKLSVMNQRVLEAEARRKTERIISSELKKAANNPELQNQLPLMPPMANVDDMPGTDITNNMPKEEYDLDCDLEKMKGSNNSDHAYSSMNIARLKHSRKSPLVPRHPPTTLHLQESTRFMLESLMMEGDLLEVSLDETHHIWRILHASNPVQKQNFEKNNPDLAESKQNLQPLDLLEKPKPKPRKPREPGVKNKLRVVLGANKEKLPRKPMVGRKGKRKVDGEEDDVKPVKKWRKMKAKDVSASESEEADAEERCNSDTCVRPSGDEVNWVQCDGCSEWFHLICEGLSKADVNSTDEYICRSCHKLSLAIDADPKLEPKEEEEETTTTKVEWTDLGV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-