Basic Information

Insect: Neoceratitis asiatica
Gene Symbol: BCL11A
Assembly: GCA_030068015.2
Location: CM061525.1:75262590-75277541[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.026 1.8 9.4 2.4 1 23 209 232 209 232 0.95

2 6 1.3e-05 0.00092 19.8 1.0 1 23 646 668 646 668 0.97

3 6 0.036 2.5 9.0 4.6 1 23 674 696 674 696 0.99

4 6 2.1e-07 1.4e-05 25.5 2.9 2 23 946 967 945 967 0.97

5 6 1.5e-05 0.001 19.6 3.3 1 23 973 995 973 995 0.99

6 6 2.7e-05 0.0019 18.8 0.4 1 22 1003 1024 1003 1024 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.026	1.8	9.4	2.4	1	23	209	232	209	232	0.95
2	6	1.3e-05	0.00092	19.8	1.0	1	23	646	668	646	668	0.97
3	6	0.036	2.5	9.0	4.6	1	23	674	696	674	696	0.99
4	6	2.1e-07	1.4e-05	25.5	2.9	2	23	946	967	945	967	0.97
5	6	1.5e-05	0.001	19.6	3.3	1	23	973	995	973	995	0.99
6	6	2.7e-05	0.0019	18.8	0.4	1	22	1003	1024	1003	1024	0.97

Sequence Information

Coding Sequence: ATGGAAACAGACCCTTCGGCGCAGGATATGCTCACTTGTGGATCCTGCCAGAAACCGTTTGCCCTTTCTGATatagttaaatttattcaacACAAAGTGCTACAGTGTAACAAAGAGAACTACGGTCAGTGTTCAACTCAAGCTCCATCAACCGATCGCGATACGGACGATGGCCGACCTTTAAGTTTAGTTAACAGAAGACCCTCAATATCGGCGCCAATTATTAATCGGAAAACGTCTGGCTCCGGTTCACGCATACACACGCCGCCACCAAGCCCTGCGGATCTCTTAGCTGATGGCGCGTCAAGCACACCCAAACGCTTGGTCGATGAAAACGATAATACAACACCCAGAAGCGAAGCGACAGCGGAAAAAAAATCGTCTTCCGATTGTTCAAACAACAACTCAACTGAACCCTATGCAGCGAGTGACTCAGAGAAAATAAACACCGTAAGGATAAAGCAGGAACCGGAGCCAATCAATGATGAAACTAGCATAAATCTTGCACTGCAGCATACAAATGATTCCAGCCAGGACAATAGCGATGGTCAGCCAATGTCGAAACGTCCTAAAATTGAAGTGGCTGACGCGGAATCCAACACACTGCATACAGaGCCCAGCTATTACACATGCTCCACATGCAAGACCCGTTACACATCAGCCTGGCGTCTGATTCAGCATGTACAGCATTCTCACGGCGTTAAAATATATGTTGAATTATCTGCCTCTACATCTCCACATTCGAGCTCACTGACGGATCCTGCGTCATCGAATTCGCCACTATCAACTACCCATCCACTATCGTCATCCTTGCCTGTGGTTGTATCGACGCCGACAATAAGCTCTGCAACCTCAACGACGCAGCCATCCACCGCTTCTTCTCTATATCCGCCCATCAGTCATCAAACACAAAAATCTGATAATTCGAGTACAAACGGTAACTTAAGTAGCAATAGCGGCGGAGTAGGAACCGGAAGCGGAAGTGGAAGTGGAGCTGGCTCCGTCTTACCAGCGCCGACTTGTAGTGGTCACTCAAATGCTgttcagcagcagcaacaacaaatccaGCAACAACTTCAACAACATAGAGTAGCcgttgctgccgctgctgcagtTGAGCAGcataagcaacagcaacagcagcaaagcAGCCTAACAACAGCAATGCAGAATGCGCAAAATTTGGCTGCCGCCGCTGCTGCGGGCATTCGGCACCACACGCTGTTGCCACCGCCTGACATGCATGCAAATCCATTTAATCTGTTGCGGATGCCTTTACCACCAGCATTGGCCCAAAATCCTGTAGTTCCTAGTGTCGCGCCTTTGTTTTCGCGACCCCATCCAGATCATTACAGAATGGAACAGCTCGTATCAGAGCAGTTTAGACATCATGGTCTCAACTTAGCTGCAGCGGCTGTTGCGGCGGCCAGTTCACTCGGCACGCCGCACTCTGGAGTTTCACAATTCAGTCAAGGTACTAATGCTTCCTCTAGCAATTCTATGGAACCACGACCACCATCGAACAGCAATAGTCATCGTGGGTCGGCACCACCAACACCATTACCACCGCCACCAATAATCATGCCACAACAGAATGCCGCAAACCAGGTGGGGCCACAGACTGGCATGAATCTAGAACCCCAGATGGATTTTTACTCGCAGCGATTGCGTCAGCTTGCAGGAACAACAAGTCCTGGGGCTGGAAATATTGTTAACTCGAGCTCGCCGAGTCCACGACAAAAGCAATCGCCACATTTTGCGAGTCCATCACCATCCCAACTACCTCCTACTCCAGTGACAAACAATACCCGACCACATTCCTTAACTCCTCCACATAAGAGTGATTTAGTGCAtcaggaaaatgaaaatatcagcTCTACACCTCGATCAGCATCCACGCCACCTTCAAAACAAAGCCAAGATAACGCTGCAGTATTTGCATGCGCTTATTGTGAGAAGAAATTTAGATTTGAAAATAACCTGATTATTCATCAGAGAACTCATACCGGAGAAAAGCCCTACAAGTGCACGGCCTGTGAATTTGAATGCTCGCATATCAACAAGCTAATGAAACATATGAGAGTTCATCGAAGTCCAGAAGATGGCACTAGCAATGCAGGTTCCGTAGATTCAAACGATGCAGCCGACTCGGAGGTTGATGCTGACGCTGATCCCGAGGCAGAAGGAGATGGAGAGACGGAAGTTGACGGTGAGGATGATAATATGGATGAGGACGGGATGGATGAAGATGAGGAGGACGAGGGCGAGGGCGAGGACGGAGATGATATAGATTACGAAGCGGAAGATCTAAGTGTTAGCAACCGAATCGATGGAAAAAGTGAAAGCCCAAAGACTACTAACACTGGTCCAACATCATTGGTGGGCGAACTTATGGATAAGTTTGGTTTATCGAATATTGCGCAATACTCCGAAGCCTACAAGCAAGCACTACAAGAGTCTggcaaattcaaatatttaacaaataaagaTAGAGACAAtaataactcaaacaattcaGGAATATCGCAAATGTCCGACAAATTAAATGGTTTCCCTTCGGCGCTGCGTCTGCGTGATGAGCTTTCGAAGAACATTTTCCAGCAGTCACCACAACCGGATGGCCCAAGCCAAGTGCCACTCTTCAATCCATTTCAAAACCCCTTTGAGCTGTCTAAGCGAGTCAAGATGGATGGGAACGACTGGTGGAATATATCGGCATTGCATAGGAATGACTCACTTTTCGAGAATCTGAAAATGAAACCTTTGGGACTTGGCACCGCCAATTCTATGCTGCATAATCCCATGCTTAAAAAGGATAACCGGCAACGCAACGACACCTGCGAGTACTGTGGCAAAGTCTTCAAGAACTGCTCCAATCTCACGGTTCACCGACGCAGCCACACGGGCGAAAAGCCATACAAGTGCGAATTGTGTTCCTACGCCTGTGCGCAAAGTTCGAAATTGACGCGCCATATGAAGACGCACGGACGCACTGGCAAAGACGTATACCGTTGCCGCTTCTGTGATATGCCCTTTAGTGTGCCGTCAACACTGGAAAAGCACATGCGCAAATGTGTTGTTAACCAGGGTAaggcggcagcagcagcggcgAATGCCGCCAATGCTGTAGCGGCCGCACAAGCCGCAGCAGCCGCTCAACATCTCCAATCACAATTACCAACACAATTATCCCCTGCAAGCTCACTATCATCATTCCCAACCCAATATGTTGGCATCAGCGGCAGCAATACTGGCAACAATATCTCACTGCCCGGCAGCATTAGTGGTGATAACGACACGAGTCTGCCCAATAGCTTACCAACACACCACATCACCTTGAAAGAGGAGGCATGA
Protein Sequence: METDPSAQDMLTCGSCQKPFALSDIVKFIQHKVLQCNKENYGQCSTQAPSTDRDTDDGRPLSLVNRRPSISAPIINRKTSGSGSRIHTPPPSPADLLADGASSTPKRLVDENDNTTPRSEATAEKKSSSDCSNNNSTEPYAASDSEKINTVRIKQEPEPINDETSINLALQHTNDSSQDNSDGQPMSKRPKIEVADAESNTLHTEPSYYTCSTCKTRYTSAWRLIQHVQHSHGVKIYVELSASTSPHSSSLTDPASSNSPLSTTHPLSSSLPVVVSTPTISSATSTTQPSTASSLYPPISHQTQKSDNSSTNGNLSSNSGGVGTGSGSGSGAGSVLPAPTCSGHSNAVQQQQQQIQQQLQQHRVAVAAAAAVEQHKQQQQQQSSLTTAMQNAQNLAAAAAAGIRHHTLLPPPDMHANPFNLLRMPLPPALAQNPVVPSVAPLFSRPHPDHYRMEQLVSEQFRHHGLNLAAAAVAAASSLGTPHSGVSQFSQGTNASSSNSMEPRPPSNSNSHRGSAPPTPLPPPPIIMPQQNAANQVGPQTGMNLEPQMDFYSQRLRQLAGTTSPGAGNIVNSSSPSPRQKQSPHFASPSPSQLPPTPVTNNTRPHSLTPPHKSDLVHQENENISSTPRSASTPPSKQSQDNAAVFACAYCEKKFRFENNLIIHQRTHTGEKPYKCTACEFECSHINKLMKHMRVHRSPEDGTSNAGSVDSNDAADSEVDADADPEAEGDGETEVDGEDDNMDEDGMDEDEEDEGEGEDGDDIDYEAEDLSVSNRIDGKSESPKTTNTGPTSLVGELMDKFGLSNIAQYSEAYKQALQESGKFKYLTNKDRDNNNSNNSGISQMSDKLNGFPSALRLRDELSKNIFQQSPQPDGPSQVPLFNPFQNPFELSKRVKMDGNDWWNISALHRNDSLFENLKMKPLGLGTANSMLHNPMLKKDNRQRNDTCEYCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRTGKDVYRCRFCDMPFSVPSTLEKHMRKCVVNQGKAAAAAANAANAVAAAQAAAAAQHLQSQLPTQLSPASSLSSFPTQYVGISGSNTGNNISLPGSISGDNDTSLPNSLPTHHITLKEEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00091710;
90% Identity: -
80% Identity: -