Basic Information

Insect: Neoceratitis asiatica
Gene Symbol: Znf574
Assembly: GCA_030068015.2
Location: CM061527.1:9973205-9975746[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 5 3.4e+02 2.2 0.1 1 10 387 396 387 410 0.66

2 10 0.04 2.7 8.8 0.0 6 23 424 441 424 441 0.97

3 10 0.0036 0.25 12.1 0.7 1 23 447 469 447 469 0.95

4 10 0.00011 0.0078 16.9 3.1 1 23 481 504 481 504 0.91

5 10 0.00053 0.036 14.8 1.7 1 23 512 535 512 535 0.96

6 10 0.016 1.1 10.1 1.7 3 23 543 563 541 563 0.92

7 10 0.01 0.71 10.7 0.5 2 23 575 597 574 597 0.95

8 10 0.00011 0.0076 16.9 3.8 1 23 604 627 604 627 0.93

9 10 2.3e-06 0.00016 22.2 1.3 1 23 633 655 633 655 0.98

10 10 0.00011 0.0073 16.9 1.3 1 23 661 684 661 684 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	5	3.4e+02	2.2	0.1	1	10	387	396	387	410	0.66
2	10	0.04	2.7	8.8	0.0	6	23	424	441	424	441	0.97
3	10	0.0036	0.25	12.1	0.7	1	23	447	469	447	469	0.95
4	10	0.00011	0.0078	16.9	3.1	1	23	481	504	481	504	0.91
5	10	0.00053	0.036	14.8	1.7	1	23	512	535	512	535	0.96
6	10	0.016	1.1	10.1	1.7	3	23	543	563	541	563	0.92
7	10	0.01	0.71	10.7	0.5	2	23	575	597	574	597	0.95
8	10	0.00011	0.0076	16.9	3.8	1	23	604	627	604	627	0.93
9	10	2.3e-06	0.00016	22.2	1.3	1	23	633	655	633	655	0.98
10	10	0.00011	0.0073	16.9	1.3	1	23	661	684	661	684	0.97

Sequence Information

Coding Sequence: ATGGCTTGCATATTATGCTTGGAAGATGGCACAACGCCGGCACAGCgtttcattgatattttctCTGAAGAAGGCTGCCAAATGACTGTCTGCAGCATCATTGCAAAGCATCTTTGGTtgaaacCAGAGAAAGACATACGTACGGGTCAACGTATATGTTGGATATGTTGGGAAGCTTTGCGcgattttcacatattttaccAACGTGTGGCTGAAGTACATAATCGCGCTGATTGGAAGACACCCTTTGCTGATATTGAGCAGGAGCATGAGAACGATCCGTTGCCAcaagaaattcaattaaaatcggAGGATACTCCCGATATGGAGGGAAAATTGGAGAACTCTTCTGCTAATGGAGAAGGGTTTTTGTTTGATTCTGAAGTAAAATTGGAGGTTTACGATTTAGACTTATTACCGCAAatagaaataattgaagaaaacacGCCGATAAGTGAGAGAGCACAGCGAGCAAAACGGAGAGGTCGTCCTGTTAAAGAAGCAAATGCTAAAACAACAGCATCTAAACGCATAAAACAAGAGCACATTCAAACACCCGACAAAGACGACGATTCCGAAACAGAATTGCCTTTATCTGTACTATTAAATAGTGACGCAATAAAGATCGATGCCACAGAAGAATCCAAACCCCCAACCGATACAACATGTAAAGAGGAGATGACAGCGAATAAAGAAACTACAGCCATCACGCAAACAGAACCAGAGAAGAAGAAACGTGgtaggccaaaaaaagttaaaaatgaagATGCCATTTCAATATCCGTAGTAACACAAAAACCGAAAGAAAAgtctgaaaataaagaaagcaaaaaagaagtaaaaaatgaacCTATACACACAAATAGCGACGATGACTTTGACGATGATTATCAGGAGTACATCGCTGCCAGCTGTTCGGGCTCTGAAGATAGTGGAGAGTCTAGCAGTGAAAATTCCGACTCAAATGACAGCCTACCCGACTTCGAGCCTAAGGCAGAATATGCTGTTATACCGAAAAGAAAAGTTGTTAAACCCAAAAAATATCGCAAGCGTCCGAAGCCACTTGTGCCACCTAAACGTATGTCGCGTGAGGAAATCGAGGCGAAACGGTCACAACAAGATGAATATGATAAAGTAATACGACAATTTTTCGGTCGTTTTGCCTGTCCTATCTGCGGACTGCTCGTACAAAACTTTGCCGAAATCCGAGGACATTTTCGTGCTTCACACACCGAGGAAAATGCTCTGCATATCGGTTATATGATGTGTTGTGGCCGCAAATTTCCACAACGGAAAGCATTGGctgaacatatatatttacattggaATCCAGAACATTTTAAATGTGATACATGTGGCAAACTTTTAACCGATAGTTTCAAATTGGAACAACATAAAGAGGCGCATGTTAATCCGCCAGAACCGAAAGAGCGTAAAATGTTCCAATGTGATAAATGCCCGAAGGTATTTACAACAAAGGCAGCTTTTGAACACCATTCGTTTTCAAAACATGTGCCGAAATCAGAATTCAAATTTGCATGCACTCTATGCAATAAAAAATTACCAACACAACGCAAACTCAAAGATCACATGAAATATAATCACGATCCTGAAAGCACAATTATTTGCGAGAAATGTGGGAGACAAGTTCGTACGCAATATTTGAAGAAACATCATCAATTGGAGCATTCCGAAGTTCCACGACCGGTACCCAAACCAATGCAATGTCAAATATGTGGCACTTGGCTGCGGCATTTATCTGGTCTTAAACAACACATGAAAGCAATACATGAGGATTCGGGCGGTGAGCATCGTTGTcatatttgtaataaagtttCAACTACTTCACGGGCACTAAGACGACACATTTACCTCAATCATGAATGCGaacgtaaatttaaatgtacGATGTGCGAAAAAGCTTTCAAACGACCTCAAGATCTAAGGgaacaTACCTCAACACATACCGGTGAAGTGTTATACACATGTCCGAATTGTCCAATGACATTTTTCTCCAATGCCAATATGTATAAACATCGTCAACGTTTGCATCGTGCTGAATGGGAAGAGGATAGAAAGAAACCTCGGCATATAGCCAATATTATGGCTCAGGCTATGGGTGCAACCGCCGCATTAAAAGCGAAACAAGCTGTAGGTGCTGCATCGGCATTTTTCGCCCAGAAAATTAACACAAATGACAGTACGGTGAGCGCAGAGCGTGTTAATAATACAAATCCAGAGCCTGTGCAGCAACAACATTTAGAAATGAgtatttaa
Protein Sequence: MACILCLEDGTTPAQRFIDIFSEEGCQMTVCSIIAKHLWLKPEKDIRTGQRICWICWEALRDFHIFYQRVAEVHNRADWKTPFADIEQEHENDPLPQEIQLKSEDTPDMEGKLENSSANGEGFLFDSEVKLEVYDLDLLPQIEIIEENTPISERAQRAKRRGRPVKEANAKTTASKRIKQEHIQTPDKDDDSETELPLSVLLNSDAIKIDATEESKPPTDTTCKEEMTANKETTAITQTEPEKKKRGRPKKVKNEDAISISVVTQKPKEKSENKESKKEVKNEPIHTNSDDDFDDDYQEYIAASCSGSEDSGESSSENSDSNDSLPDFEPKAEYAVIPKRKVVKPKKYRKRPKPLVPPKRMSREEIEAKRSQQDEYDKVIRQFFGRFACPICGLLVQNFAEIRGHFRASHTEENALHIGYMMCCGRKFPQRKALAEHIYLHWNPEHFKCDTCGKLLTDSFKLEQHKEAHVNPPEPKERKMFQCDKCPKVFTTKAAFEHHSFSKHVPKSEFKFACTLCNKKLPTQRKLKDHMKYNHDPESTIICEKCGRQVRTQYLKKHHQLEHSEVPRPVPKPMQCQICGTWLRHLSGLKQHMKAIHEDSGGEHRCHICNKVSTTSRALRRHIYLNHECERKFKCTMCEKAFKRPQDLREHTSTHTGEVLYTCPNCPMTFFSNANMYKHRQRLHRAEWEEDRKKPRHIANIMAQAMGATAALKAKQAVGAASAFFAQKINTNDSTVSAERVNNTNPEPVQQQHLEMSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00304021;
90% Identity: iTF_00304021;
80% Identity: -