Basic Information

Insect: Neoceratitis asiatica
Gene Symbol: -
Assembly: GCA_030068015.2
Location: CM061524.1:62261122-62264627[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0084 0.58 11.0 0.4 2 23 29 50 28 50 0.96

2 16 0.015 1 10.2 1.6 1 23 56 79 56 79 0.89

3 16 0.13 8.8 7.3 0.1 7 23 88 106 83 106 0.84

4 16 0.037 2.5 9.0 0.2 1 21 114 134 114 135 0.94

5 16 1.2e-05 0.00081 20.0 1.6 1 23 143 165 143 165 0.96

6 16 0.0047 0.32 11.8 2.6 1 23 171 193 171 193 0.97

7 16 0.0034 0.24 12.2 4.2 1 23 199 221 199 221 0.95

8 16 0.032 2.2 9.1 0.6 1 23 672 695 672 695 0.97

9 16 0.17 12 6.9 3.0 1 23 720 742 720 742 0.97

10 16 0.076 5.2 8.0 3.0 1 23 750 774 750 775 0.97

11 16 0.01 0.72 10.7 1.9 2 23 779 800 778 800 0.97

12 16 0.00044 0.03 15.0 0.1 1 21 814 834 814 835 0.95

13 16 0.0013 0.088 13.5 0.9 1 23 843 865 843 865 0.97

14 16 1.8e-06 0.00012 22.5 2.0 1 23 871 894 871 894 0.98

15 16 4e-05 0.0028 18.3 0.9 1 23 900 922 900 922 0.98

16 16 0.00022 0.015 15.9 2.1 1 23 928 950 928 950 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0084	0.58	11.0	0.4	2	23	29	50	28	50	0.96
2	16	0.015	1	10.2	1.6	1	23	56	79	56	79	0.89
3	16	0.13	8.8	7.3	0.1	7	23	88	106	83	106	0.84
4	16	0.037	2.5	9.0	0.2	1	21	114	134	114	135	0.94
5	16	1.2e-05	0.00081	20.0	1.6	1	23	143	165	143	165	0.96
6	16	0.0047	0.32	11.8	2.6	1	23	171	193	171	193	0.97
7	16	0.0034	0.24	12.2	4.2	1	23	199	221	199	221	0.95
8	16	0.032	2.2	9.1	0.6	1	23	672	695	672	695	0.97
9	16	0.17	12	6.9	3.0	1	23	720	742	720	742	0.97
10	16	0.076	5.2	8.0	3.0	1	23	750	774	750	775	0.97
11	16	0.01	0.72	10.7	1.9	2	23	779	800	778	800	0.97
12	16	0.00044	0.03	15.0	0.1	1	21	814	834	814	835	0.95
13	16	0.0013	0.088	13.5	0.9	1	23	843	865	843	865	0.97
14	16	1.8e-06	0.00012	22.5	2.0	1	23	871	894	871	894	0.98
15	16	4e-05	0.0028	18.3	0.9	1	23	900	922	900	922	0.98
16	16	0.00022	0.015	15.9	2.1	1	23	928	950	928	950	0.95

Sequence Information

Coding Sequence: ATGGTCGACACTGTCAAAACCGACAACATACCAACGGCAACATCGATGTTGGTGCAGCTCACCACTGATGGCGTACCCAAACTGCACTGTCCTGTATGTGATAAGGCACTTACATCACTTAACGGCTATGTTAATCATGTAAAGAAGCATGAGCCACCGGGTGGTTTCCTCTGTCGCTATTGTGAGGAACGTTATTGCTCCGAAGATGCATTAAAGAAGCACCGTGATGAGATTCACACAACAATTATCTGCCGATTGTGCACAGGAGTAACGTTTACCAATGAAAGTGCCTATCGGGAACATATACGTGTTATACACAATGGTATCGATCGTGAAATGTTTACATGCGACAAATGTGGAGCAGAATATAAGACACTCTTACCATTCAAGCGACATTTGGAAACGGAGTGTGGCACAATTAAGCCTTTCAAATGTGATCAGTGTCCAATGAGCTTTGTTACAAAATATAATCTCAAACAACATAAGGAATTACATACGGGAGAACGTAAATATTGTTGTAGTTATTGCGGgaaaaattttctgcaaaagGGACGGTTAATTGAACATGAACGGTCGCACACAGGCGAAAAGCCGCATAAATGTGATGTCTGCGGTAAATGTTTTGCGCATCGCGAAAGTATTGTTACACATTCCTCAATTCATACGGGCATCCGTTTGGTGGAGTGTAAATGTTGCCACACACGTTTCTCTTGCCATTCCAACTTAATAAAACATCGTCGCACGCGCCCCGATACCTGTGGTCTCCCTGAATTTGATCCGCCAAAAGAACGCGTGCGTAAGAAAAACCGTTTAAGAATACCACCAACACTTAATCCTACTTCCGAAATAAAGGTAAGCAATTCTAATCGAATAATTAAGCCGGATCATAAAGATCAAATGCGCAATACGAAAGTAAAAAAGGATGTCGGCACTAAACTTACAGCATGCAACCGTACTGCCGGCAAACCTGGACGGAAACAGGGCAAACGAAAAAACCAACTATCTGATACAgacacagaagaagaagagaatgaaGGAAGGTGGTGTAATGAAAACCAAACAGAAGGCAATTCGCTGGCTATGATAACAATCGTACATCAGTCTAAAAGTCCGCAAAGTGATTTGGAAAACAGCATTaacgaaaaacttgaaaaactgGAGAGAGACTCTGATGATGATTTTGCTGGTTTCGATCCAATCGACAGTGGGAGCGATGACTATGATGAAAAGGAGGAAAATGTGAAATCTTTATTgccaatatttgaagaaataaaagaagaaaatggtGATGATGAACTAGAGTTCATCGATGCAGAGCTTAGCTTAAAGTCAGAAGATGATAAATTGCTAGATGTTTCACTGAGAGATGCGAAGAAGGAAAGTGGGACACAAAATGGCGATCAGCAGCAGTGTAAAGAGCAGACTAATGGTTTACATGAAActgaattaataataattaaaaatgagagCAGCATAAATTATGTAGAAGAAACGGATATTTTAGATGTAGACAcgCCTGCAGATACGACGGTAACTTCATGTAAAATACTGCTACGTGACATTTGTCAACGTTACCCTCAGCTAAAAGATGAATCGAGCATTAATGTATCAACCGTCGCTCCACTACGTCCACGCCCACGAAGAAATAGAGCTGAACAAGCACAAAAAAAGTCAACGAAAACCGATAGTGATGAGTGTTCGCAGATCTCGGCTGATGAATATTTGGAAACCGTAAATCAAGTTGAGATATCCGCTGTGGAGGTGAAGAAAACAAAGCGAAGACGTAAGACCCGCAGACAACCAGGGAGAGTGAAGGCGACAAGTTCTGCAGATGACCATGAAGAAGTTGACCAACAAATAGATGTAattaatgaacaaaataaattgtcaACTGAAAGGTCCCCTGTTGAAGAGAAATTTCCGAAAGAGCCGAATAAGCGTAGACGTATGGCAAAGCTTTCacagaaagaattaaaaatgcgCTTAAAATTAACGAAGCGTCGCGAAAAGCCATATCAATGCCCATATTGTATTAAAgtttattatataagtaaaccatttgaaaaacatttgcGTAATGATCATAAACGTCCCGAAGAAGAGATTAAGGAGTCGCTAAGAACCACGGATGAGCTCGCCATTAATGATGGCGAGGTTTTCAAGTGTCATATTTGctcaaaaatatacttaatgGAGAAACGATTGGAGAGTCATATTAAAAAGCATGGTCTTGACGGCAGCTTAATCTTCAAATGTCCCTGTTATTgtgctttatatttttctacaaaagaaGAAGCTACAGTACATGCACGTAAGGAGCATCACGATAtgttatattgtaatatttgcgaaaaatatATGACCGGTCATGATTCACTGAAAAATCATATTAGAAAGCATGAACAAGAGAAGGATAATAAATCGGTTGCCAATCGTAATTTCGTTTGCGACAAATGTGGTAAGAAATTCGGTGGTCGCACTGCACTAACCGATCATGTGCGCTCCGATTGTGGCAGAAAACCATTATATCAGTGCAATGTTTGCGGCAAACATTTGACCACCTCAGGCATATTGAAAACTCACTTACTTTTGCATAAGGACGATACACCGTATCAGTGCGATAAATGTGGTAAAGCATTTAAGGTGAAAGCACAATATAAAACGCATTTAAAAACAAGACATACGGACAATAAACCCTTCCAATGTCATTTGTGCCCGAAAGCCTATCCATACCGCGAATCTCTGCTCACACACATGACTGTGCACACGGGCATCAAGCGTTTCCTTTGCAATGGTTGTGGCAAACGTTTCACTTGTGTTTCCAACTTACAAGCACATCGTAAAGTGCATTCAGAAACGTGTGGTCAATTACCGCTCAATGCGAAAGCAACCCAATATATGGGCGTACAAAAGGGGAATTTACTTTTAGGCGCCAAACCGGAAGCGGGTGTTGATTATAAAGAAACAAACACTCTACTCGCAAAAGAAGTAATCGATAGAGATCGTCCGATGGCGCAGGAGATTAATTATCCATCAGAACCGTCAGCACCTTTGGCAACTGTACCGTTAAATTACACGCAGACGGTCACGCAAAAATCAGTACTCCCGTCAGCCATAACGCCATTTATAGGTATTGCACAAACAATCCCACCAATCCTCGAATAA
Protein Sequence: MVDTVKTDNIPTATSMLVQLTTDGVPKLHCPVCDKALTSLNGYVNHVKKHEPPGGFLCRYCEERYCSEDALKKHRDEIHTTIICRLCTGVTFTNESAYREHIRVIHNGIDREMFTCDKCGAEYKTLLPFKRHLETECGTIKPFKCDQCPMSFVTKYNLKQHKELHTGERKYCCSYCGKNFLQKGRLIEHERSHTGEKPHKCDVCGKCFAHRESIVTHSSIHTGIRLVECKCCHTRFSCHSNLIKHRRTRPDTCGLPEFDPPKERVRKKNRLRIPPTLNPTSEIKVSNSNRIIKPDHKDQMRNTKVKKDVGTKLTACNRTAGKPGRKQGKRKNQLSDTDTEEEENEGRWCNENQTEGNSLAMITIVHQSKSPQSDLENSINEKLEKLERDSDDDFAGFDPIDSGSDDYDEKEENVKSLLPIFEEIKEENGDDELEFIDAELSLKSEDDKLLDVSLRDAKKESGTQNGDQQQCKEQTNGLHETELIIIKNESSINYVEETDILDVDTPADTTVTSCKILLRDICQRYPQLKDESSINVSTVAPLRPRPRRNRAEQAQKKSTKTDSDECSQISADEYLETVNQVEISAVEVKKTKRRRKTRRQPGRVKATSSADDHEEVDQQIDVINEQNKLSTERSPVEEKFPKEPNKRRRMAKLSQKELKMRLKLTKRREKPYQCPYCIKVYYISKPFEKHLRNDHKRPEEEIKESLRTTDELAINDGEVFKCHICSKIYLMEKRLESHIKKHGLDGSLIFKCPCYCALYFSTKEEATVHARKEHHDMLYCNICEKYMTGHDSLKNHIRKHEQEKDNKSVANRNFVCDKCGKKFGGRTALTDHVRSDCGRKPLYQCNVCGKHLTTSGILKTHLLLHKDDTPYQCDKCGKAFKVKAQYKTHLKTRHTDNKPFQCHLCPKAYPYRESLLTHMTVHTGIKRFLCNGCGKRFTCVSNLQAHRKVHSETCGQLPLNAKATQYMGVQKGNLLLGAKPEAGVDYKETNTLLAKEVIDRDRPMAQEINYPSEPSAPLATVPLNYTQTVTQKSVLPSAITPFIGIAQTIPPILE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00303963;
90% Identity: -
80% Identity: -