Nasi009813.2
Basic Information
- Insect
- Neoceratitis asiatica
- Gene Symbol
- -
- Assembly
- GCA_030068015.2
- Location
- CM061527.1:9986564-9991127[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 4.3 7e+03 -2.6 0.1 19 29 7 17 4 20 0.81 2 9 0.11 1.8e+02 2.5 0.3 12 28 280 296 275 311 0.82 3 9 2.6 4.3e+03 -1.9 0.2 6 26 303 321 298 324 0.74 4 9 0.024 38 4.6 3.4 6 43 332 363 330 364 0.83 5 9 0.0064 10 6.4 1.9 5 26 360 380 358 383 0.92 6 9 0.042 69 3.8 8.7 5 40 388 421 384 452 0.86 7 9 1.5e-05 0.024 14.9 1.4 12 43 455 483 444 484 0.85 8 9 9.2e-06 0.015 15.5 4.6 6 40 509 540 507 543 0.92 9 9 0.011 17 5.7 0.3 18 44 549 572 545 572 0.94
Sequence Information
- Coding Sequence
- ATGTTTGATAAATTTGGTTGTATATTATGCTTAGAAAATACATctgataagcaaataaatatggaCTCTGATGAGCTCCAGGCAGTTAACGCACGTGATATAATTaaacaacattttaaagaggAAGTGCTTAGCGTGATGTCGTTTTTAATCAACAAAGTTGTGTGCTGCCAATGCTGGGAGTTGGTGCAATCATTTCATGAATTCTATTTACGTGTGCAGAGTGCACATTTCACCGCCAGTAGAGCCATGAAGTCATTACAAGAATTGGAGATACCCATTACCGAAATAAAGGCAGAGCCTCATGCGGTAGACGAATTAGCTTCGCCGCCatcaatttttcaaagttctgaATTGTGCTGTGTTGAAATGGATAAAATTGTAGTGGAGTTAAAAAATGAGGGTGAAGTTACGTCAACCGATGATGATAAAATTGTCGGGGTCTATTCTTCGAACGAGAAGCAGCAACTAAAAACAATTGAAGAATTGGAGATACCCCCTACCCGAATAGAGGTAGAACATCATGTGGGAGAGGAATTAGCTTCATCGTCATCAATTCTTCAAAGTTCACCTACTGTATTGAAAAAGTTCGGTGctgaaattgataaaattgtaGAGGATTTAAAAAGTGAGGGTGAAGGCACTGACTCAACCGATGAtgataataatataagtaatataacATGTAATGATGAGAAAAATCCTTTACCCGCAAAAAGGGAAGTAGtgcgtaataaaataaaagccaaacgAAAACATCAAGAGCCAACAATCGTCGGAGCTCATTCTTCGAATGAGAAGCAGCGTCTAAAAACAATTGAATATGAtgaatttattgcgaaaaatttCAAGCTCACTTGCTTTCTTTGTCAAAAATCTCTAGTGAACTTCAGAGAATTAAAGATACACTATCGTGAAGAGCATAAAActaatggatatgtaaagtgctGTGGTAAGAAATTACTAAAACGTGGTATTCTTGTTGATCATATACATTTTCACAATGACCCGGAATACTTTAAATGTCAACATTGCGATAAAGTGTTCTGTGACCGAGGTAATCTCGaatcacatttaaaatatttccacgATTCCAAGGAACGTACTGCATATAAATGCGAAATTTGTTCAAAGGTGTTCTTCTGGCATAAAGTTCTCGTTCGACATTACCAAGTACATTCCACCAAAGAAGAGCAGAAAGTAAAATGTACGCAATGTGAAAAGACgTTCGTAAGTGAATACCATATGAAACAACACTTAAACCTATACCACCTTCGGTTGTATGCCAAGATATGTGATATTTGTGGTAAATCTTTTACTGGCGGTGAAGCTTTCCGCCGACATCAGCAAGAGCATGCCGGTCTACCAAGATCAAAAGTAAAATGCGAAATATGCAACACTGAGTTATCGACAAAAAATGGTCTAGCACAACATATTAAGGCAATGCACACTGAGGAGTATCAAAAACCTCAAGTTTGTTCAGTATGTTCAAAAATATCGCCAACACTTCGATCTCATATCACACATTTCAGAAATATGCATGCCACAAAGAAGATGCATGTCTGTAAAATCTGTGataaaactttcaaaagaccCACCAATTTACGTgaGCATATGGCAACGCACACTGGAGAAGTTTTGTACACTTGTACATTTTGTCCACAAACGTTTAATTCAAagtcaaatatgtatgtacatcgtaAACGAAAACATCCGAGAGAATGGACTGAGAAAtgtgcaaagaaaaatttttcgaATGGAATAAGACAAAATACAAAAGAGCAGTTAGATTCTAAAGCATATACAGACAGTGGAGATGTTATAGAGCATGTATCGAAGGAAgcgctctaa
- Protein Sequence
- MFDKFGCILCLENTSDKQINMDSDELQAVNARDIIKQHFKEEVLSVMSFLINKVVCCQCWELVQSFHEFYLRVQSAHFTASRAMKSLQELEIPITEIKAEPHAVDELASPPSIFQSSELCCVEMDKIVVELKNEGEVTSTDDDKIVGVYSSNEKQQLKTIEELEIPPTRIEVEHHVGEELASSSSILQSSPTVLKKFGAEIDKIVEDLKSEGEGTDSTDDDNNISNITCNDEKNPLPAKREVVRNKIKAKRKHQEPTIVGAHSSNEKQRLKTIEYDEFIAKNFKLTCFLCQKSLVNFRELKIHYREEHKTNGYVKCCGKKLLKRGILVDHIHFHNDPEYFKCQHCDKVFCDRGNLESHLKYFHDSKERTAYKCEICSKVFFWHKVLVRHYQVHSTKEEQKVKCTQCEKTFVSEYHMKQHLNLYHLRLYAKICDICGKSFTGGEAFRRHQQEHAGLPRSKVKCEICNTELSTKNGLAQHIKAMHTEEYQKPQVCSVCSKISPTLRSHITHFRNMHATKKMHVCKICDKTFKRPTNLREHMATHTGEVLYTCTFCPQTFNSKSNMYVHRKRKHPREWTEKCAKKNFSNGIRQNTKEQLDSKAYTDSGDVIEHVSKEAL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01045694;
- 90% Identity
- iTF_01045694;
- 80% Identity
- iTF_01045694;