Basic Information

Gene Symbol
ncor1
Assembly
GCA_030068015.2
Location
CM061525.1:73614989-73627487[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-07 0.00015 22.0 0.0 3 43 1150 1190 1149 1192 0.97

Sequence Information

Coding Sequence
ATGTCCGCGCTAGCCGCAATATCTAATCCGACAGCTAACGATGCACCTAATGCTGCTGGTGGTGGCTCATCATCAGCAACGGGTGGTGGTAATGTTGAGCGCCGTTGTGAAAATGCCGATTGTAATGTAATCAAATTGGTCTCAATGGTGCCAAAGCGTAAAATCACACAGTTTGTAACAGAGCCTACAGTTATGGAGAAGCCTATGCTTATAAATGGCTTTACAACTGTTTTCCAAGTGGAAGGCAGTTCCGCAAAATTAAGCGACTTAAAGAATCCAAATCCAAATACAACTGTTCAGCCCAAAACAATTTTTCGTATTGTACcaaatacacatgcacatattgtaaattatgttgttgttgatgctgatgGTGATTCATTgcgtaaaataaatgaaggtgATCCAGCAACAATGAGAAAATTACTAGAATCGCAAAAAGTGAGTGCTGATCAAATGTTAAAGAAACTTATGGCGGGACACGGTCCCAGCGTACCGATTATGTGCAGTAATGCACCAACACCAACCGGTGTTAATACTATAACTGCTTCAACACCGTTAAATGCACGTAATGTGACAGCTTCTGCAAACACAACCGTCACAACCACACCAGCAACTGTCAATAATACATCTAGTGCACGTATAAATGTTAACTCAACTCCCACCACCGGAAATGCTGTTCCTAACACTACGGCGAAATCCTCAGCAATACAATTACCCATGCGCATGCATCCAAATTTGAAGATAACCGCAGTTGCGAGTAGAGATACCATTGGACAATTAGTAGAGCCAACAGTTACTAATGCACCACAGTCAGCTCAGACACCTTCAACTGGAACACCCAACGTACCCTTAATAACGCCGGTACCATTGGCGAATTTGCAAAGTACACCTGCTCCAGCATCCACCGCTGCCGCCACCTCGGCACAACCAGGAGATAAggcaaatattgataaaatgcaAGCGGAACTTGCGGAGTTGCGACGCACAGTAGCAATGCTTGCTGAGGCAATGCCCATGAATGCTCAAGCCCAAAAGGCGCTCAAACAAACGACCGCTCAACCGCCGATCGACGGGCCGCAGTCATACACGAAGGGCGGCGGTGCACTTGGCCAGCAGTCTACTCATTCAGCTGCTGCAGCTGCAGCCGTTGCGGCAGCCGCTCAGCAGCAGTTCAACCAGCAGATGCATCATATGCAtcagcagcatcagcaacagcaacaacaacagcagcagcagcaacagcaacaacttcaacaacagcaagccgcccagcagcaacagcaacagcaacagcagcaacaacaacagcaagctgCACAACAGCAGCCACATCATCACCAccatcatcagcaacaacaacaacagaccgCCCGTTCGGCAGCTAGTCCCCTATCCCCACCACGACCAGGCCCCGGTTCAGCGGCCGCCGCCAACACATACGTTAAGTACGCGGAGCTTAATGCGGTGCGGGAAGCGCCACATCCCTACATCCAACAAAATTCGTATGGTATTGGCGCGCCGGGCCCGCAATACCGTGACAACCCCTACACGCGATTACCTCAAATGCCGCCTGATTTCCAACGCGCAGCGGTTGCTGCAGCCGCTGCAGCGGCTAGTGGTGGTGGCGGTAGCGCACAGGTTCCGTCCGGTGTTGTGCAAGTACCGGGCGGCGGTTTGCAGCCGCCCCCACCCACTGTCGGCAGTGCAGCCCACCTTGAAGCTTTGCATTTCGCGCACCAACAGCCACCCTCAGGACAACAATCGGTTCAAGCAGCACATGTGCTTAATGCTTCAAACACTGGCGCAagtggcggcggcggtggtgcACCCTCACCTCTCAATGCCAATACCGCGGCGAGTAATGCCGGTTTAATACGTCAGCGTATCATACTGCCAGCGCATCCCTACTCCAGTGAGTATATAGCGAATGCGCGgagccaacagcaacaacatcaacagcagcaccagcaacagcatcaacaacaacagcaacatacaCAGCAGCAACAGGCGCCACCCGATCCAGGAGGACAACCGTACAAGAAGCTGCGTCTGAGTGAAGCGACGGCGAATGCAGTCAGTAACACGAATCACCTGCCACCTAAAGTAGTGAATGCAACGCAGCCACAACCACGACAACCGTCACCATCCGCCGCGGCACTGGTTgccgcacaacaacaacaacaacaacagcaacaacatcaacagcaacatcaaATGTTAGCGGCCAGCGGTTTACGTAACAGTGCAGCTCAGATGCTGCAGCCAGTTCCACATTCGCATCTGACCGTGGTTTCTAGCAGTCATGTAGTGCATGCCCAGCCACCTCCCGCAGCGATGCAGCAATTGAAAGTGGAGACACAACCATCATTGTTGTCATCGGTAGCTACAACGGCTTCAAGTCGTGGCATTCCATCGGGTGCGGTGATGAGTGGAAATAGTAACATTGGTGGCGTTGGTGTCAGTGTAGGTGTTGGTGTGGGCGTTGGCGTCATTAATGTACCACCAAATGCATCCTCTATGGTAACAGCTGGTGGAGCAGTGCCAGTCGCACCGACGAAATCCTCATCCTCATCAGAGGGATACCATCCGCAAGTCGAAGCCATCTCGCCCACACTGCCAGCCGATAATGTCGATGAACGGGGTAGCGCTGTGACGGAAGATCTTCTTACACAAATACAGAAAGTGGATGCCGAAATAGAGAGTGCAGAGAATACAATGGGGACGTTACGAAAGCAAGAgaagaattttattaataaggCCGTACTGAGCAAGAAACAGCGCGAACAGGAGATGCTTGCGGCTGAGAATGATGATTCTATTAAAATGGAACATACATGGAGACTACAGACGCTGGCGCAAAAAATTTACGAGGCGAACCGTAAAACGGCCGCCGAGCGACATTCCATACTCAGTCATTGCGGTAACCGCACAATATTACCGTTATATAATCAACCTTTAGATGTAGAAGTACTGACAACGCTGATCAAACGACATCAGACGACGATGCGTACACCATTGCTGGAGCACATATGTAAGCTGAAGCACGAGCGCTGGACACACAATACCGGATTAGTGGAAACATATGCGCAGATGTCAAGTGAGTGGCAAAAGCGTGTTGAAAAATCAGAGGGTAGCGCGAAAAGAAAGGCGAGGGAGGCTAAAAACCGTGAGTTCTTTGAGAAGGTGTTTACGGAGCTGAGAAAACAGCGTGAGGATAAGGAGCGCTTCAACCGTGTTGGTTCGCGCATCAAATCCGAGGCCGATTTGGAGGAGATAATGGATGGTTTGCAAGAGCAGGCTATGGAGGATAAGAAGATGCGCTCGTACGCCGTTATACCACCACTAATGTTTGATGCCCGTCAGCGTCGCTGCGTCTACCACAATGAAAACGGCTTCATTGAAGATATGGTGGTAGTGCATAAGGAGCGTCAAACGCTTAACGTGTGGACGGCCGGTGAAAAGGAGATATTTAAAGAGAAATTCCTGCAGCATCCCAAGAATTTTGGCGCCATTGCAGCCAGTTTGGATCGCAAGTCGGCACAGGACTGTGTACGCTACTACTACCTCAGCAAAAAGACGGAGAATTATAAGCAACTGCTAAGAAAATCACGTCAACGGACACGTTCGTCGCGTAATCCGCAaaaggcacaacaacaacagagccAATGCATTATCGATTCGTTAACGACTGGCGTAACAACACGTCTGCAGCGTGAACAACAACAGAAGACAGGCGGACGTTCGGCGGCTGCGGAACGAGAACGTGCTGAGCGTGCAGAACGTGCCGCCGAGCGTGCAGCAGCGGACGCGGCGAAAGCAGCCGCACAAGCCAAGTCCACCAACAAAGGTGACAACAGCAGTAATGCTGATGCGTCAGCAGCAGAATCTACAACCGCTGGCGACCCGACTGAAGCAGCCAAAGGCAAAGCGAACGCTGCTAATTCTGCAGCACAAAAATCTAACAACACGtccaatagcaacaacaacagcacaaccGCAACAGGTGGCAGTACCACGGCAACGCCAAAAGTTGGCGAAGCTGAAAAAGCTACTGAAAGCACAGCTACCAACCAGCAGGCAACAACAACCGCTACGACCGATGCGGCACAAGGCGGTACTGCGGCGAAAGCGAAAAGCAGCGAGTCGAATGCCAGCGAAGCGAATGCAACAACCACTATTGCAGCGGCGACAGCCACCAACAGtagtagcagcaacagcaatgtcACAAACGTTGATGCAAATAGTAAAAAGCCCACAACAGCTTTTGGTACAGTGATGGCGAATAACGAAATGGAAGTGGATAGCCAAACGTTGGTGGACGACAAGACTGGCGTTAGTTACAACAGCACTAGCAACAGCATAAGTAGTGGTGGAGCAGTTGGTGTTGTTAACAACAACGGTACACCAACATCGGGCAACAATAATTCCGGTGTCGCTCATCATCCACCTGGCACTCCGAATGGCATCAAAACCATATATGCCAACACAATAGCACAGGCTGTGGCTGCGGCAGTCGCCAATGAAGATGTTAAGGTCAATCCTGCGGGTGATAAGATCGTTACAGCAGCAACAGATGGCAGTAATGCGAAAGACAGCGTTATTGGTGGTGGCAATAAAGTGGGCAGCGGTAATAGTGTGGCCACGCCTACCACCTCAACAACCGCGGGCAATTTTCTTGGGCAGAAGCTCAAGGCGGCGCAAGTGGAAGGCATTGGCGCCGGCAACGAAGGCAACTCAGATGTTAGTGATCCCAAACGGAAGCGTCTCGACGTTACGACAAACGCAGATGGTTCCACTACAAACTCCTCtccctcctcctcctcctcctctacAAACACAAAcatcaacaataataataataacaacaacagcagcagcagcaacaacaacaacaactcttcCTCCTCCACATTATCAATCAACTCCTCCACTACGAATATTCACGGACTCAGTGGTAATCCTGccaacaacagcaccaacaacaatggcaataTGAACAATTCCATGGATATTTTAAGTGTTGCTGGTGTAGTTTCAGCAGCAGcaggcacaacaacaacaacaacaacatcagcaggtGCGTTAACAACAACACTAGTTGGTGTGTCGCTCTCAACAACATTGACCACAAATGTTGCAACGataccagcagcaacaacagcaacagcagtagcaACTGCACCGATAACATTTACAACGACTGAAGGCAACAACGCCATCGATGGCAAAGGTCAATTTAGGGTGGTGAATGGCATGTGA
Protein Sequence
MSALAAISNPTANDAPNAAGGGSSSATGGGNVERRCENADCNVIKLVSMVPKRKITQFVTEPTVMEKPMLINGFTTVFQVEGSSAKLSDLKNPNPNTTVQPKTIFRIVPNTHAHIVNYVVVDADGDSLRKINEGDPATMRKLLESQKVSADQMLKKLMAGHGPSVPIMCSNAPTPTGVNTITASTPLNARNVTASANTTVTTTPATVNNTSSARINVNSTPTTGNAVPNTTAKSSAIQLPMRMHPNLKITAVASRDTIGQLVEPTVTNAPQSAQTPSTGTPNVPLITPVPLANLQSTPAPASTAAATSAQPGDKANIDKMQAELAELRRTVAMLAEAMPMNAQAQKALKQTTAQPPIDGPQSYTKGGGALGQQSTHSAAAAAAVAAAAQQQFNQQMHHMHQQHQQQQQQQQQQQQQQLQQQQAAQQQQQQQQQQQQQQAAQQQPHHHHHHQQQQQQTARSAASPLSPPRPGPGSAAAANTYVKYAELNAVREAPHPYIQQNSYGIGAPGPQYRDNPYTRLPQMPPDFQRAAVAAAAAAASGGGGSAQVPSGVVQVPGGGLQPPPPTVGSAAHLEALHFAHQQPPSGQQSVQAAHVLNASNTGASGGGGGAPSPLNANTAASNAGLIRQRIILPAHPYSSEYIANARSQQQQHQQQHQQQHQQQQQHTQQQQAPPDPGGQPYKKLRLSEATANAVSNTNHLPPKVVNATQPQPRQPSPSAAALVAAQQQQQQQQQHQQQHQMLAASGLRNSAAQMLQPVPHSHLTVVSSSHVVHAQPPPAAMQQLKVETQPSLLSSVATTASSRGIPSGAVMSGNSNIGGVGVSVGVGVGVGVINVPPNASSMVTAGGAVPVAPTKSSSSSEGYHPQVEAISPTLPADNVDERGSAVTEDLLTQIQKVDAEIESAENTMGTLRKQEKNFINKAVLSKKQREQEMLAAENDDSIKMEHTWRLQTLAQKIYEANRKTAAERHSILSHCGNRTILPLYNQPLDVEVLTTLIKRHQTTMRTPLLEHICKLKHERWTHNTGLVETYAQMSSEWQKRVEKSEGSAKRKAREAKNREFFEKVFTELRKQREDKERFNRVGSRIKSEADLEEIMDGLQEQAMEDKKMRSYAVIPPLMFDARQRRCVYHNENGFIEDMVVVHKERQTLNVWTAGEKEIFKEKFLQHPKNFGAIAASLDRKSAQDCVRYYYLSKKTENYKQLLRKSRQRTRSSRNPQKAQQQQSQCIIDSLTTGVTTRLQREQQQKTGGRSAAAERERAERAERAAERAAADAAKAAAQAKSTNKGDNSSNADASAAESTTAGDPTEAAKGKANAANSAAQKSNNTSNSNNNSTTATGGSTTATPKVGEAEKATESTATNQQATTTATTDAAQGGTAAKAKSSESNASEANATTTIAAATATNSSSSNSNVTNVDANSKKPTTAFGTVMANNEMEVDSQTLVDDKTGVSYNSTSNSISSGGAVGVVNNNGTPTSGNNNSGVAHHPPGTPNGIKTIYANTIAQAVAAAVANEDVKVNPAGDKIVTAATDGSNAKDSVIGGGNKVGSGNSVATPTTSTTAGNFLGQKLKAAQVEGIGAGNEGNSDVSDPKRKRLDVTTNADGSTTNSSPSSSSSSTNTNINNNNNNNNSSSSNNNNNSSSSTLSINSSTTNIHGLSGNPANNSTNNNGNMNNSMDILSVAGVVSAAAGTTTTTTTSAGALTTTLVGVSLSTTLTTNVATIPAATTATAVATAPITFTTTEGNNAIDGKGQFRVVNGM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-