Nasi003190.1
Basic Information
- Insect
- Neoceratitis asiatica
- Gene Symbol
- -
- Assembly
- GCA_030068015.2
- Location
- CM061525.1:1905241-1911676[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.7e-10 1.1e-06 28.5 0.1 3 45 245 287 243 287 0.91 2 3 6.9 1.1e+04 -3.6 0.1 28 37 317 326 317 328 0.76 3 3 3.7e-08 6e-05 22.9 0.1 13 40 365 391 358 396 0.80
Sequence Information
- Coding Sequence
- ATGTCGGAAGTTGAGAACAACCAAGAAACCAACGGTACAAGCAATGGGGatgtgcctgaaattgaattaataattaagGAAGAATTTATGCTTGAAAATGAGTTTTGGGGAAATGCGTACCAAAATATCAGCGTCAACACAATGTCAGATTCGGACAAAGAAGGTTTACATGATCTAGATGAAAAAGAGAACATccttcaaatgaatttaaaattaatgcaacaacaacaacaacaacctcaaCTCATAAAAGAGGACAGAAGAACAACAAACTTTTCAGCGAAACGACATAGCGAGCTCGTCGACGATGTTGGCCATGTTCTTATGCTTACCCATCATGACAATCAGCACTTTCACTTCGAATATGTAATACCGAAAAAAGACGAGAACATATTGGAACATACTTATTCCGGATCGCACGTAGCATCCACACAGTTATGCGATAAATCGAATGTGGAAAAGATTAATCCTAATAATAGGTTTCCATTGTGGCAAAAACATATTGAAGAAGAAGTGACAATTAAAGGTGAACAATTAAATGATAAATGCAATTTAGATTTAGCTGCAATGGTAGCCGAAGCCTGTGAAGGCGTATATGATGATATAGTAAATGACCTGCATTCATACAGCAACATCAGTGATACAAATAGTTGCCCTGATGAGAATGAAGAATTTTCTGAATCTGCCAATAATGACACCGTGAAAAAGCGAAAGAAACGCCCATATAACACCGAAGCAGTCGAGCTCGCTGCAAAGGCTGTATTGGAAGGTCAAATGAGTTTGGGAAAGGCGGCTAATTGCTTTAATGTAGTACGTTCAACGGTCGCCTCTCGTGTGGCCAAACATCCTAAACGTAAAAGACGAAAAGCGAATAAGGAACTACAAGAGCTTATTTACAGCAAACTGAAGGCTGGCATACAAATATCGGAAATATCAAGAACGCTGCACGTACCCAAATCTACAGTTCATTTACATAAAACTAGACTGAAGAATAATGGCCTGTTGCCATCAGTGTGGATTCGAAACGGTAGTAAGGATATGGTAGATCACGGCGTTCAAGAGCGCCTAAAGCAAGCATATCGCGGTCATACGGTTAACGGAATGTCAGTACGTTTCGCTGCTGAATTCTATTCTTTGCCTGTTACAACCTTATGGCGATATATAAATCGGAGAAAAAATAACGCctcagaaaattttgttgacggTATCGATAGTAGTCAACCTGATTTAGAAGAATACTCTGATGATGACCCTCCTTCAAATGATTTTGAAGACTTGGAACTcgaagaaaaaccaaaaacggAGGAGGAAACACTGGAACAGCAACTAATGAATCAACTTTTAGAGTAA
- Protein Sequence
- MSEVENNQETNGTSNGDVPEIELIIKEEFMLENEFWGNAYQNISVNTMSDSDKEGLHDLDEKENILQMNLKLMQQQQQQPQLIKEDRRTTNFSAKRHSELVDDVGHVLMLTHHDNQHFHFEYVIPKKDENILEHTYSGSHVASTQLCDKSNVEKINPNNRFPLWQKHIEEEVTIKGEQLNDKCNLDLAAMVAEACEGVYDDIVNDLHSYSNISDTNSCPDENEEFSESANNDTVKKRKKRPYNTEAVELAAKAVLEGQMSLGKAANCFNVVRSTVASRVAKHPKRKRRKANKELQELIYSKLKAGIQISEISRTLHVPKSTVHLHKTRLKNNGLLPSVWIRNGSKDMVDHGVQERLKQAYRGHTVNGMSVRFAAEFYSLPVTTLWRYINRRKNNASENFVDGIDSSQPDLEEYSDDDPPSNDFEDLELEEKPKTEEETLEQQLMNQLLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -