Nasi008138.1
Basic Information
- Insect
- Neoceratitis asiatica
- Gene Symbol
- ttk
- Assembly
- GCA_030068015.2
- Location
- CM061526.1:54696260-54702214[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-19 5.4e-16 58.3 0.0 2 45 596 640 595 640 0.97
Sequence Information
- Coding Sequence
- ATGTCGGTACAACAATTTTGTTTGCGCTGGAATAACCATCAACCGAATTTCATTTCGGTTTGTTCGTCGTTACTCCATAATGGTACATTGGTAGACGTTACGTTAGCGGCAGAGGGTCGACAACTTCAGGCACATAAAATTGTTCTCTCCGCTTGCAGCTCATATTTTCAAacATTATTTACATCGAATCCATGTCAGCATCCAATTGTAATACTTAAAGATGTACAATACGACGATCTTAAAACTATGGTTGATTTTATGTACTACGGTGAGGTAAATGTATCGCAGGAACAATTACCACATATTCTAAAAACGGCCGAGATGCTTAAAATCAAAGGACTTGCTGAAATGCCCACCGATCCTGCCAATTTAACTAAATCTGAAAGTAAATCATCGAATGAACCCACCGATTTAGTGGGCAGCGGTAGTGCTGGTAGTAATGGTCAAAGTAGTAGTGGCGTTACTATGGGTAGTAGTGCTGGCGGTAGCTTGAATGAATCATTGTGggagCCGCAACATCACCACGGGCAACACGGTGAAGCTCAGTTTCAGTCACAtcaccatcaacagcaacaaaatagcCAAACACAAAcatcacaacagcaacaacaacatcatcaattAAGGCGCACTCCTTCACCACTAGGAGCGGGAGCATCCCCAGCTACTCGCCGAAAACGCCTACGGAAATCATCAAATAATGGATCTGGCGATCGGACTAATTCGGAAGAACAACATAATACTTCTTTGGATAGTGGAAATAATACTGGAGGCATAAGTCTTACACAAATGGATCAAATGACATTTGGAACTACGGGCGGTACTATTAGTGGCATGCAAACTCACTCACTTCACAcagtaaaattgttaaaagaatCTAGAACAGAAGTTGAACAACATCCACAAGACGATAGCTTAGATGATGCTCATGGACATGTACACATGCAAATTAAACCCGAAGTTGATATGAGCAGTGTTCAACAGTCAATGCCGCTGGATATTTCCGCTGCCACAACTCCTTCGGAACATGACGCTCCAAATTCTCAATCATCTCATTCTGGTCTGCAATGGACGGTCGTTGATTCGAACTATTCTCGCTTTTCGCTTTCGACTTGCCAACCAAATTTGATTGGTAACGGCGGCaatggtggcggtggtggtggcggcgccGGCGCACAACAACCAAACGCAACCAACAATAGTGatcaccagcaacaacaacaacgacagcaacATGCGCAAGAAACAGCCGCTCAGCAAGCAGCCGCtggacaacagcaacaacagcagcagcagcagcatttcCAACAGTTACActatcagcagcagcaacaacagcagcaacagcaacaacaacaacaacagcagcaacagcaacaacaacagcaacagcagcaacaaaatgcAGCAACTACATATTCACCACAGATCATAACGGTGAATAGTCTAAATtatggcggcggcggcggcaccAGTGCAGCAGCACAAAACCTATCACCAACCTCACCCAACGAAGCAAGTATGGTCCAATCGGTATACAGTCAAGGACCGACACCCATACAATCACCCGTACATCCCAACGATGTGACAGGAAATGCTTCTGGTAGTGGTGTCAGCAATATATCCACCGGTAACACAGCAacaagtggtggtggtggcggtagcGGCAGTGGCGGAGGTGgaggcggtggcggtggcggcaGCAGCTCGAGTGGTGGCAATGCAAATAGCGGCAGCGGTGCCAATCAAGCTGTAAAACGTAAACGTTCTGTCAATCCCCAAGGTGATGAGAATTTCATACGTGCTTTGGAGGCAGTACGTTCCGGTGGTATTGGTTTCTGTAAGGCTGCGCGCCTATATGGCGTAAATAATCGTACATTGTGGttagaatataaaaaacgtGGCTATCCCGTTTCACGACCCAGCATTAAGGCCCGTGTCGTTAAACAAGAACCAAATATGTCGCCATCTCCAACACCACCAAACACCGCTACCGATGATACTACTAATGAAAATTACGAACATATAACGGCCGCTGTAGCTGCGGCTGCACAATCGGCTGCATTGAATATGCAAATACCACCACCCGCCGAAACGCCAACACCATCGGTCATGTGTACGCCGCATCATGCCGGCGCAACTGGTGGTGCAGGCGGTGCACATCCGGCTATGGGCGTAATGAATTTCTTAGATCCGCGTCACATGGACTTCTCGGCAGCTGGTCTACACACCGTCTCCAGGCAACGATATATCGATGCGAGTAGTGTCGGTGCCAGCACCGGCGCCGGTACCATCAATGTTAATCCGGCAGCTGCAATGAATTTacaaagtattaattttaattcaatatag
- Protein Sequence
- MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQTLFTSNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSESKSSNEPTDLVGSGSAGSNGQSSSGVTMGSSAGGSLNESLWEPQHHHGQHGEAQFQSHHHQQQQNSQTQTSQQQQQHHQLRRTPSPLGAGASPATRRKRLRKSSNNGSGDRTNSEEQHNTSLDSGNNTGGISLTQMDQMTFGTTGGTISGMQTHSLHTVKLLKESRTEVEQHPQDDSLDDAHGHVHMQIKPEVDMSSVQQSMPLDISAATTPSEHDAPNSQSSHSGLQWTVVDSNYSRFSLSTCQPNLIGNGGNGGGGGGGAGAQQPNATNNSDHQQQQQRQQHAQETAAQQAAAGQQQQQQQQQHFQQLHYQQQQQQQQQQQQQQQQQQQQQQQQQQQNAATTYSPQIITVNSLNYGGGGGTSAAAQNLSPTSPNEASMVQSVYSQGPTPIQSPVHPNDVTGNASGSGVSNISTGNTATSGGGGGSGSGGGGGGGGGGSSSSGGNANSGSGANQAVKRKRSVNPQGDENFIRALEAVRSGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKARVVKQEPNMSPSPTPPNTATDDTTNENYEHITAAVAAAAQSAALNMQIPPPAETPTPSVMCTPHHAGATGGAGGAHPAMGVMNFLDPRHMDFSAAGLHTVSRQRYIDASSVGASTGAGTINVNPAAAMNLQSINFNSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00081119;
- 90% Identity
- iTF_01045562;
- 80% Identity
- iTF_01045562;