Basic Information

Insect: Neoascia interrupta
Gene Symbol: -
Assembly: GCA_947623515.1
Location: OX392463.1:114886546-114913474[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0085 1.2 10.7 1.9 3 20 1409 1426 1408 1428 0.94

2 8 0.00097 0.14 13.6 0.8 1 23 1435 1457 1435 1457 0.99

3 8 0.0048 0.7 11.4 4.6 1 23 1461 1483 1461 1483 0.98

4 8 2.7e-07 4e-05 24.8 3.1 1 23 1489 1511 1489 1511 0.99

5 8 7.9e-05 0.012 17.0 0.2 1 23 1517 1539 1517 1539 0.98

6 8 0.035 5.1 8.7 0.7 1 23 1545 1567 1545 1567 0.97

7 8 0.00021 0.031 15.7 0.9 1 23 1573 1595 1573 1595 0.94

8 8 3.6e-05 0.0053 18.1 1.1 1 23 1601 1623 1601 1623 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0085	1.2	10.7	1.9	3	20	1409	1426	1408	1428	0.94
2	8	0.00097	0.14	13.6	0.8	1	23	1435	1457	1435	1457	0.99
3	8	0.0048	0.7	11.4	4.6	1	23	1461	1483	1461	1483	0.98
4	8	2.7e-07	4e-05	24.8	3.1	1	23	1489	1511	1489	1511	0.99
5	8	7.9e-05	0.012	17.0	0.2	1	23	1517	1539	1517	1539	0.98
6	8	0.035	5.1	8.7	0.7	1	23	1545	1567	1545	1567	0.97
7	8	0.00021	0.031	15.7	0.9	1	23	1573	1595	1573	1595	0.94
8	8	3.6e-05	0.0053	18.1	1.1	1	23	1601	1623	1601	1623	0.98

Sequence Information

Coding Sequence: ATGTGCACCACTGCCACATCAACGTTCTTGAACTTTGACTCGCCGCCCACCATAAAGCTTTGCGGTGAAGTTTATTGCTCCCAGGATCTTGAGCAATATTTTCTTAATTTTGAAGCCGCGAGTTCATTAGAAATAAACACGACAAATCGGGAAACCGAAATTAATGCAGTCAATATTTCTTTAAACAATGCTTCTGATGACCACACAACACAAACCAATGAAGATCCGCTGTCGTATATGAAAGTGGAAATCTCAAGAGATGAGGCAAATAATGATTCCGAACGGGATTCTGGAGGTGTTAACATTCTGTCTGATTGTCATGACGAAGATGATTTAGCAGTAGACAATTTGGAGCGCCGCAAGTTCGTAGAAGTTGTTATCGACGAGTATAAAAAACGTCCAGTTTTATGGCAAACCAGAGACAACAAAGCGGGCAAAAGAATCCAGTTCCAGCAAATGAGAAATTCTGTTAATGCCAAGTTAAAGAAGAACTATAACTGCTTGGAGCTACGCAATCAAATATCCAATTTACGAACCAGCTACAAACGTGCTCTAAAAAAGAAGGACGAAGTAGGATCCGCTCCCACATTGTGGTATTTTGACAAGCTATCATTTCTTGACCAATCTAGTCATAATCTAAACGTCGAAAAAGTAGAAAACGAACTTTTTCAAGACTTCTTGGAAAACAGCAATCAAAGTGGGGCCAATGTAGAAGACTCCAACTATGCTGACAACTTAACGCTCAGTGAAACTCTACCAGACGGAAAATGTACAGAAACTGCCGATAATGATGAGAAATTTGATATTAGCAACGATGAGTGCCAAGAAGATGCATCCAACGAAGATGATTTAACCATAAAATGTTTGATGCGTCGAGAATTGATTTCGAAAATAATAGAAGAATACAAAAAACGGCCAATTCTGTGGCAAGATGGACACAACAGAGAGGCCAGGAAGACCCAATTTGCAGAAATGAGAACAGCTATCAACAAAAACTTAAAACAAAAATTAACAGTTCTAGAACTTCGCGATAAAATTGCTAGAATTCGTGACTACTACAAACGCGTTCTAAAAAGAAAAGAATTATACCAAAGACTGTACCCTGAAAGAGAGGATTTTGTTCCTAGATTATGGTATTTCGACAAACTCGGCTTTCTTCAAAAAACCTTTGATGACAATAAGATTGATCTTGAAAGAAGGAAATGCGTTTCAGAAGAGACTATGGACTGCACAGCAAAAAGTAACATGAATCAGGAGGATATTTCGTTCAACGAACAAAAGTCAACGACAACAGAAGCAACAACTCGTGAAGACCCACTTGAACTCAAGAAACCATTAGAGGAGATGCAACCAGACATAGAAAAGGAAAGTTTATTCCCACAGAACATCTCCATGTTGGAAAATAAGGAAATGCGAAACGATACCGATGAAAATTCGCTCATAGAGGAATTAATACCTACGAAACTTAAATTTAAGGAAATAAGTAATAACCCATCATCATCCCTAAAAGTAGAAAAATATCAAGCTGAAGACGAAGAAGAAGACATGGGACAATTATCTGACTATCAAGACGAAGATTTTCTTACGATAGACAACTTAATGCGTCGTAAATTGGTCGAAGGAATTATCGACGAATACAGGAAACGTCCAGCTATATGGCAAAACCGAGCCAACCAGGCTACCAGAAATCATCACTTCAAACAAATGAGAAAAGCTATTAACGCGAAATTCAAGAAAAACTACACAGACCTAGAACTACATGTACAGATTAGGTCTTTAAGAAGTTCGTACCGACGAGCATTACAACAAAAACAAAGATTTGAGGCAAAGAATCCTAACAAGGGCAGATTCGTTCCTCAGCTGTGGTATTTTAACAAGTTTTCATTCTTGGAGCAAGCAAAATATGGTCACAAGGGGAAACCACCAGATCAAAGTGAACTCAACTTAAGTGAAGTACCCAAAGAAGATTCTTCGGACGATGAACAAGTGCCTAACTCTGATGAAGATTATTCTGCTCCGGGATCGAGAACTGAAAGGCGAGTTCGCCCTGACGAAAAAGTATTGAGTGAACCGAAAATAATTTTAGAAATAATTAAACAATACAAATCGTACGCCTTTTTGTGGGATCAAACTGCAAAATTGTACGGTGATAAATACGCACGAAAAGATGCCTACCATCAAATGACTAAAAGCATTAATGCAACATTTTGCAAAAAAGTTACAGAACGAGAATTGAGGCAGCAAATCATAAATCTACGCAGCGTTTATAGACGCGCTCAGCGTAAGCAGCATAGTGCCAACTATCACATATCTTTGTGGTATTACAAAAATTTATCTTTCATCGACAACAAATCTGATCAACCGGAAGATGCATCGCAGTCTAAACCAGTTGATTCTGCTGCGGAAAACTCAACAGTTTCAACCGAAAATTTAAAAATTGAATCCCTAGACGAAAGCCAGGAATGTGAAATGTTTGACTCGCAAAACTATTTTGACGAAGAGATGCAGCTCGACGAAGCAAACTCTTCTACTCTTGGAAAAAATGTGAATTCAATAACGCTAAGCATAATTGAGGAATATAAACGGCACCCGTGCTTGTGGGACAGTTACACCTACAAGACTGCTAGTCGGCAGGCACGTATTGATGCAAACAAAGCAATTGCCATGGCTATCAACTCTAAATTCAACACAAGCTTTACCAACGAACAAATAAGAAACAAAATCGTGCAACTAAGAAGTAGCTATAGACGAGTGCTGCGTTGTAAGGAAGCTTTTGAGAAGAAGCATGCAAATGCGAAGAGAAAGTTCCACCCGCAGTTATGGTATTTCGATAAAATGGCATTCATTGGAGCTAAGGAAAGTGACTTTTGGGTTAGTCGTCGTAAGAAACAAAAAACAAAATCCGGCGATATAGAAAAGGACAGAGAAAAGGACATGGATGTCGACGTGGATGAGGAAGAAGAGGAAGAGTGTGCAGTTGAAGAAAATAATGAAACCCTTACTGAATATGAGCTGGCCTCTAACGGTGACTTAGATTCAGCAATGCTTCCAGAAGTGGATGAGCTGCGAAATTGCGGAAAAGATGTCAAAAGAAACCCTATTTGGAATGTGCCATTAATAAAGAAGAAGAATATTTTAACTGCCATCATAGAAGAATACAAGAAAAAAACTTGTCTCTGGGCCGTGAAGCACTACACCAATGATAATCATTACCGACGAAAAGCATTCGAACAAATTGCCAACGCTATAAACGATAGATTTGACACCACATTCACCTACAGAGACATAAGCAGCCAAATACTGAAGCTTTGCTTGACATATAGAAGAATGCTTCGTCGAAAACAATCTCACAAGGACGGTGAGTTCAAAACAAAAATGTGGTACGCCGATCTGTTATCGTTTATCGAGACCAAGCCAGAAGATTTGAGAAAACTTGCAGAAGACGAGATAGAAAGTGACGCAGATGCAAACAATCTCACTGATAAAGAAGACCAGCCACAAGAGACTACTTGTGTAACGTGCGACGAAAATAAAGGGCAAGTTTTCAAAATTATCGAACTCTATAAAGCAGCGCCCGTCTTGTGGGATAAAAACCATCCAAGAAATAGGCAGGTGGTCCAACGAAAAAAAGCGATGGATCAGATTATTGCAACTCTAAGTCAGGAGCATGATTGTTGCCTAACAACCGAAGAATTCCGTTATCAAATACGCTTCTTAAAAGAGTCCTATTTCCGAACTGTACGCCAGGAGGCTGCTTTAAAACGTGGAGACTTTAACTGCAAATATATATCCAGACCATTTTTTTACAATCAAATGTCGTTCTTGGAACCATTTGCTAACAAAGAGCCTATAAAGGTTCCAAAGCTGCAAATCTTCACTCAAATTCAACCCAGCGAAGATTTTTCATTTCTTACCGAAAATCGAAGTCTCATGATGGCCTTTATAGAAATGTACAAGGCTAATAATTGTTTGTGGGATCAAAATAACAAGGATCACGACAATGATGCTGCTCACTCGGAAGCCTACGATAAATTAATTGACATGTTTCTCCAGCACGATGTATCTTTCACAAGGGAACAAGTTTTGGCAGCGATAAGCTTTCTCCATGCAACCGTGGTAAATACCCAAAAATCTGTGTCATCCGAAGACAAGTGCGAGGAAACTGCTTGGTTCTACGAACACCTGAAATTCCTAGGAAGAATTCCCCGTTTCTATGATAAATTTTGCGATCACTGCGGTCAACATTTTCGGTCCTCGAAAGAATATGAACAACACAAAATCGAAATCGCTGGCGACTATCCGTACAAGTGTTTCATATGTAATGCTGGATTTGTGTCACGTTCTAAGTATGCCTACCATCAAATAACGCACAAGGAGCCCCACAAATGTGACATTTGCGACTTTCAGGCATATGACCGGCATAATTTCAATGTTCATATGCGTCGTCACAAGGGTATCCATTCATACAAGTGCGAACACTGTGACAAAGGATTTGTCACCTCAACCGAACTGACTCGGCACTTGCGAAAACACACTGGTGAAAAGGCTTTCATATGTGATATATGCGGCAAAGCTTTGGCATCGAATTCTGAATTCTATCAGCATTTGAAACGACATCGCAATCAGCGCGATCACAAATGTGATGTTTGCGGAAGCGCTTTTTTCACGTTAAAAATATTGCGCGATCACATGGCTTCCCATTCGGCGGAGCGTACACATATATGTGAAGTGTGCGGTGCGGCGTTTAAGCGAAAAAAGACCCTAAATCAGCACAAAGCGTTGCATCTGGAGGAAAAAAAACACGAATGCAAAATTTGTGGGAAACAGTTTGCCCAAAAGGCTGGAGTGTACTCTCATATGAAGTCACATGGACTGATGCTGGGGAATACAAATTAA
Protein Sequence: MCTTATSTFLNFDSPPTIKLCGEVYCSQDLEQYFLNFEAASSLEINTTNRETEINAVNISLNNASDDHTTQTNEDPLSYMKVEISRDEANNDSERDSGGVNILSDCHDEDDLAVDNLERRKFVEVVIDEYKKRPVLWQTRDNKAGKRIQFQQMRNSVNAKLKKNYNCLELRNQISNLRTSYKRALKKKDEVGSAPTLWYFDKLSFLDQSSHNLNVEKVENELFQDFLENSNQSGANVEDSNYADNLTLSETLPDGKCTETADNDEKFDISNDECQEDASNEDDLTIKCLMRRELISKIIEEYKKRPILWQDGHNREARKTQFAEMRTAINKNLKQKLTVLELRDKIARIRDYYKRVLKRKELYQRLYPEREDFVPRLWYFDKLGFLQKTFDDNKIDLERRKCVSEETMDCTAKSNMNQEDISFNEQKSTTTEATTREDPLELKKPLEEMQPDIEKESLFPQNISMLENKEMRNDTDENSLIEELIPTKLKFKEISNNPSSSLKVEKYQAEDEEEDMGQLSDYQDEDFLTIDNLMRRKLVEGIIDEYRKRPAIWQNRANQATRNHHFKQMRKAINAKFKKNYTDLELHVQIRSLRSSYRRALQQKQRFEAKNPNKGRFVPQLWYFNKFSFLEQAKYGHKGKPPDQSELNLSEVPKEDSSDDEQVPNSDEDYSAPGSRTERRVRPDEKVLSEPKIILEIIKQYKSYAFLWDQTAKLYGDKYARKDAYHQMTKSINATFCKKVTERELRQQIINLRSVYRRAQRKQHSANYHISLWYYKNLSFIDNKSDQPEDASQSKPVDSAAENSTVSTENLKIESLDESQECEMFDSQNYFDEEMQLDEANSSTLGKNVNSITLSIIEEYKRHPCLWDSYTYKTASRQARIDANKAIAMAINSKFNTSFTNEQIRNKIVQLRSSYRRVLRCKEAFEKKHANAKRKFHPQLWYFDKMAFIGAKESDFWVSRRKKQKTKSGDIEKDREKDMDVDVDEEEEEECAVEENNETLTEYELASNGDLDSAMLPEVDELRNCGKDVKRNPIWNVPLIKKKNILTAIIEEYKKKTCLWAVKHYTNDNHYRRKAFEQIANAINDRFDTTFTYRDISSQILKLCLTYRRMLRRKQSHKDGEFKTKMWYADLLSFIETKPEDLRKLAEDEIESDADANNLTDKEDQPQETTCVTCDENKGQVFKIIELYKAAPVLWDKNHPRNRQVVQRKKAMDQIIATLSQEHDCCLTTEEFRYQIRFLKESYFRTVRQEAALKRGDFNCKYISRPFFYNQMSFLEPFANKEPIKVPKLQIFTQIQPSEDFSFLTENRSLMMAFIEMYKANNCLWDQNNKDHDNDAAHSEAYDKLIDMFLQHDVSFTREQVLAAISFLHATVVNTQKSVSSEDKCEETAWFYEHLKFLGRIPRFYDKFCDHCGQHFRSSKEYEQHKIEIAGDYPYKCFICNAGFVSRSKYAYHQITHKEPHKCDICDFQAYDRHNFNVHMRRHKGIHSYKCEHCDKGFVTSTELTRHLRKHTGEKAFICDICGKALASNSEFYQHLKRHRNQRDHKCDVCGSAFFTLKILRDHMASHSAERTHICEVCGAAFKRKKTLNQHKALHLEEKKHECKICGKQFAQKAGVYSHMKSHGLMLGNTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -