Basic Information

Insect: Neoascia interrupta
Gene Symbol: cicD
Assembly: GCA_947623515.1
Location: OX392464.1:116355926-116359041[-]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 4.1 8.7e+03 -2.1 0.1 6 17 70 81 70 82 0.86

2 7 3.8 8.1e+03 -2.0 0.0 22 46 258 284 242 284 0.70

3 7 3.7e-12 7.9e-09 36.5 0.1 1 44 290 334 290 336 0.95

4 7 1.3e-12 2.7e-09 38.0 0.2 2 43 346 391 345 394 0.93

5 7 2.2e-09 4.6e-06 27.6 0.0 1 44 400 444 400 446 0.92

6 7 1.4e-13 3.1e-10 41.0 0.1 3 43 454 495 453 497 0.96

7 7 2.8 6e+03 -1.6 0.0 19 31 580 592 579 599 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	4.1	8.7e+03	-2.1	0.1	6	17	70	81	70	82	0.86
2	7	3.8	8.1e+03	-2.0	0.0	22	46	258	284	242	284	0.70
3	7	3.7e-12	7.9e-09	36.5	0.1	1	44	290	334	290	336	0.95
4	7	1.3e-12	2.7e-09	38.0	0.2	2	43	346	391	345	394	0.93
5	7	2.2e-09	4.6e-06	27.6	0.0	1	44	400	444	400	446	0.92
6	7	1.4e-13	3.1e-10	41.0	0.1	3	43	454	495	453	497	0.96
7	7	2.8	6e+03	-1.6	0.0	19	31	580	592	579	599	0.85

Sequence Information

Coding Sequence: ATGGATTCCAACGAGGAGGAACCCAAGAAACCAAAAGCGAAAAAGCCCAAAGCCTCTAAacgcaaagatgaaagcgatctcgaagaaacttccgaaagcgatggaagctacatcgatgacgacgacgaggaagaaaccagcgacgacaatagcgaggacaatgacaattcgagcgctaatgaagatcacgaagacgacgacgacgtggaggatgaagacgaCCTCCTGGCAAATGGTATTGAGCTCGACAAAATAACCGAAGCCCTTAATGTATTGGAAAACCACGCCGATGTGAGCACAGAAAATGCCTTGGTCCTCAATCAAAACCTGCAGGAAATGCTGGTCACGCTGCGGAACAAGGTTATCTCAATGCTGAACAAATGTCGCGAGACGTATGTAGAGAATCAGAAAAAAACGAATCAGCCACCTGTTGTGTCCACGCTAAAGGGTATCGGTAGTTGTGGAGCCCCCTTCTTCAAGGACACTCGGGGTAGGGGGTGTCCTCCGAATGCCGACTATGTCCATCGCAGCGAAGTAGAAAGGGAAGTTTTCCCCGCTGACCTGGAGTTTTACCCGCACTTTGTTTGGACGGCCACAGATAAACTGGGAATCCTGCAGGGAATCAAGGAGCAGGCTATCGAGCACATGGAGCGTAAATCATCATACCCGTCGACCAGCAAGAAATCATCCTCGAGCTTGAGTAAAAACGTTAAGCTCCACACAGAGAAACTCGCAGATCTGCTCAAAGTTGTGGACAGCGATTTCAAAATCGATTGGCATCAAATATCGGTCTACAACCTTAAGTCACGGCATACGGCCAACAGTTGCTTTGCCATTTGGAATGTGTATCTCAAGCCGGAGATAAACCGTGGCGAATGGTCCGATGAAGAGAATATCAAGCTAAACGAACTGGCCAAGAAGTACAAGTTTCAGGACTGGGCTGCCATTGCTAGCGAAATGAAGGGACGATCGGACTATCAGTGCTTTGTTCAGTATCAGACGGTTGTGGCATTTAATTTGCGCGAAGCTCGAAATGAACGCTGGACAAAGGAAGAAGACGAGCACCTGCTGGCTTTGGTTGAACAGCATCGAGTGGGCACAGCGATACGCTGGAATCCGATTTGTTCGCAATTCCCAAATCGATCGAAGAAGCAGTGCTTCGCCAGATACAAATACAGTCTGGATCCGAACATTAAGAGGGTACCCTTCACGCCCGAAGAAGACTGCATCATCCTGGCTGCCGTCGAGGAGTACGGCGAAAATTTCGTCTGTTTCCCCCGTGTGCTCTTCCCCAATCGAAGCGTGATTCAAATACGCAACCGCTACTTTAACTCGATCAAAGTGCGTGAAACGATTCGCTGTTGGACACCCGAAGACGACAAACTACTGCTCGATCTGGTCGCTGAGCATGGAAGTCACGATTGGAGAAAAATCTCCGATATAATAAAAGTTCACTCGCGCACCAGCTGTCGCACACGCTTCCATGTCATCTCGAGATTCCTCAGCGACAATCCAAAAGCCAGTGTCGACGATTTGCCTCGTAAACGACGGCGACCCGTCTCGGACGTAACGAAGAGCAATTGGATGAACAAAATTGCCGAAATCAAACAAAATCCGGAAGCAGCAACAGCAGAAACTGTGTCTTCCCGACCGCCCCCTAAAGAGTTGTACCGCCTGAAGTTGCGAAACAACGAATTGAAATGGTACAACTTCCTAAAGTTCTCCTACGACTACTCCTTCGGCAAGTGTTTCAACAAAATTCCGAATTCAATGAAGAGTTTGGAATTTGTGCGGACGGCCTTCAACATGGACCTTAGGCTGCCCGTTCGATTGAGTGCAGCGCATCATAATGGGGCCGTGCGTGTGAATCTCGAGAAACTAGCGAATATGCGAGCTGAAGACAACCATTTCTTTGTGAGTGACACGCCGCATGTTGGGTACAAGCTGCCGCCAAGCTATTGCAGCCTGTTGGCTTTCCGGGCGCTATGCATACACACATCGTTTGAAGAGGCCACAGAAGAGTCGACATCCACGGTCAAGGATTCGGAAGCAGTTAGCGAGGCAAAGCGAAAGTTTCGCCAACGGCTGGTAGCCGTTTTGTACAAGACGACGTTGCTCAGCCGTCTTGAGCCGTCAAGCGTCATCGAACAGACGCACTTCAATGTGTTGTTCAACCCGAACACAAGACTGGGTAGGATCGTCAGTCGCAGTTTGGCCGAGCTGAAGGCCACTCAGGCGAACAAGATGGCTAAAAGCCTTCTCATCGTCGAAGAGAAGGCAAAGAGAAAAGCGGAAATGGAGGCAGATCCCACGTTGTTTGCTATAAGGAAGAAAGCAAAGCTTGCGCCGCCAAAATAA
Protein Sequence: MDSNEEEPKKPKAKKPKASKRKDESDLEETSESDGSYIDDDDEEETSDDNSEDNDNSSANEDHEDDDDVEDEDDLLANGIELDKITEALNVLENHADVSTENALVLNQNLQEMLVTLRNKVISMLNKCRETYVENQKKTNQPPVVSTLKGIGSCGAPFFKDTRGRGCPPNADYVHRSEVEREVFPADLEFYPHFVWTATDKLGILQGIKEQAIEHMERKSSYPSTSKKSSSSLSKNVKLHTEKLADLLKVVDSDFKIDWHQISVYNLKSRHTANSCFAIWNVYLKPEINRGEWSDEENIKLNELAKKYKFQDWAAIASEMKGRSDYQCFVQYQTVVAFNLREARNERWTKEEDEHLLALVEQHRVGTAIRWNPICSQFPNRSKKQCFARYKYSLDPNIKRVPFTPEEDCIILAAVEEYGENFVCFPRVLFPNRSVIQIRNRYFNSIKVRETIRCWTPEDDKLLLDLVAEHGSHDWRKISDIIKVHSRTSCRTRFHVISRFLSDNPKASVDDLPRKRRRPVSDVTKSNWMNKIAEIKQNPEAATAETVSSRPPPKELYRLKLRNNELKWYNFLKFSYDYSFGKCFNKIPNSMKSLEFVRTAFNMDLRLPVRLSAAHHNGAVRVNLEKLANMRAEDNHFFVSDTPHVGYKLPPSYCSLLAFRALCIHTSFEEATEESTSTVKDSEAVSEAKRKFRQRLVAVLYKTTLLSRLEPSSVIEQTHFNVLFNPNTRLGRIVSRSLAELKATQANKMAKSLLIVEEKAKRKAEMEADPTLFAIRKKAKLAPPK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -