Nint032448.1
Basic Information
- Insect
- Neoascia interrupta
- Gene Symbol
- bab2
- Assembly
- GCA_947623515.1
- Location
- OX392462.1:167224760-167227868[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-13 8.7e-10 39.1 0.0 4 45 392 433 389 433 0.92 2 2 0.055 1e+02 3.7 1.1 4 20 521 536 520 536 0.93
Sequence Information
- Coding Sequence
- ATGGGTGGCCCAACAATAGCGGAAGGGCAAACCTATTGCCTACGATGGAACAATCACAAATCGAATTTGGTCGAGATCCTCGATGCTCTGATCAAAATGGAGAGCTATGTCGATTGTACGATTGTCGTCGACGATCAAGTGCAATTCAAGGCACACCGAGTTGTGTTGGCCGCCAATTCACCATATTTCCAATCGATCCTGCAGGATGTGCCCATGGATCATTGTAGCATACTGTTTCCTGGCGTTCAGGCATTTGAAATGCGTGCCCTACTGGAGTACATGTACACCGGCGAGGTGAATGTGACGCAGAGTCAAATTCCAAAAATTATGCGAATAGCCGAGCAGTTAGAGGTGAAAGGCCTCTTCGATATGGCCGACTTGAAGGAGAAGTTCAATAAATTCGAAGAAAGCGGCAGTAGTCCGTATGCAGCGTCAGCGGCAGCTGCAGCCGCTGCAGCGGCATCGTCCTCATCTTTGCATCATCACTCGACGCAATTGGAGCAACAGCGCTCGTCCAGTGCGAGGGAAAACAACGAAACATTAAACTCATCACCGGTCATTACGACATCGACGAATATAAGTCCTTCGGCTGCGCCAACGAGTAGCTCTTCACCACCGTACGCCTACAAGTCACCCTATGCGAGTATCTATTCAAAGAGTCCCCAGCCAGGTCCTTCGGCTGCAGATCGTCACTCAAATTGGCCCGTCTCACCGGTTATGCCGAACTCAATGCCAGCGAATGCTGCTGCCATGCTGAGTTCCGTGTACGAAACTGCACCCGATATGAACCCGTTGAAACGCAAAAAGCTCTCATCGATCTCAAGTATGCTCATGAACCGGGACACGCCGATACTGCGCAACGTTCTGGCCCAAGCGCACTCGGCAGACTCGTCACAGCCGATGCCACTGGTTTGCCAACCGGTCAAGTCGGAAAAGAATGAAAAATCGCCTCAGATCAATGATACCGGCCTGAGTATCTGCAACGGATCTGACTATAGTCAGCAGAAGAAATACAAATATGATGAACCTCATTCGCCTTACACTGACCGTTCGTTTGAAGACGATGGCATGGATAGCCCACAAACATATCCCGGTGAAAACCGCATGGGATCTTTTGGCGCTCAGCAACAACAGAAACCCGAATGGAAGCGCTACAAACAATACACACGCAGTGACATTTTGCAAGCTATCGAATGCGTCCGCAACGGCATGAGTGCGCTGCAAGCATCCCGCAAGTATGGTGTTCCTTCGCGAACGCTGTACGATAAGGTGAAGAAACTTGGCATCACTACTGGCCGTCCTATGAATCGCTCGATCAAACGCAGCCCAAGTACCGGTGGTGGAAGTAGCTCGGCATTCCCCTATAGTCATGGTTATGGTCAATCGGAACCTCTACTCTCGTCCATGCATGACAGTAGCGAGCGAGAGAAGGATCACGAACGTCACCTTCCTCCGACAATACCTCATCCAGCGGCCGCACTCCTCGATCCAGCATTCCTGCAGCAGGCATTCGAAAGCCGAGGCGGTGACATCGCTGGCCGAGAAGCACTTCACGCCATGGCTCTAGCTGCTGCTGCGCACGCGGCTGTCAATGGAATGTCAACCAGTCCCGGAACAAATGGAACGGCACGCTCGCCGAGTCCTAGTTTCGCCATAAAATATGCTCGACCTCAGAGCCCGGCCGTAAGTCAGTACCGTGAAAGAGAAATGATGATAGAGCGGGAAAAGGAACGCGAGCGAGAGAGAGAGCTCGAAGGTCAGCGTGAGCGAGAGCGTGAACACGAGAGACGCATGCTCGACCGTGAGATAATGGAGAAGGAACGCTATCAGCGAGACATCGAAATGGATCGCGAGCGCGAACTCTCTGAACGTCGGCAGGCAGAACGCGACGAGGAGGATGGCCATGTCGAGGATTTGTCAGTGAGTCGCAAAGACAGTATATCACCGAATCCGAACTGTCATCTTGGTGTCATAGTGCCTCCGATGAACACCAAACTTCCCGCCAATAGTAATGACGATTTCAAGACAAATGAAATCTGCAAGCGCGAGCTCCTCAACGAGGAACGGGACCAGAGTCTTAATCACGAGTAA
- Protein Sequence
- MGGPTIAEGQTYCLRWNNHKSNLVEILDALIKMESYVDCTIVVDDQVQFKAHRVVLAANSPYFQSILQDVPMDHCSILFPGVQAFEMRALLEYMYTGEVNVTQSQIPKIMRIAEQLEVKGLFDMADLKEKFNKFEESGSSPYAASAAAAAAAAASSSSLHHHSTQLEQQRSSSARENNETLNSSPVITTSTNISPSAAPTSSSSPPYAYKSPYASIYSKSPQPGPSAADRHSNWPVSPVMPNSMPANAAAMLSSVYETAPDMNPLKRKKLSSISSMLMNRDTPILRNVLAQAHSADSSQPMPLVCQPVKSEKNEKSPQINDTGLSICNGSDYSQQKKYKYDEPHSPYTDRSFEDDGMDSPQTYPGENRMGSFGAQQQQKPEWKRYKQYTRSDILQAIECVRNGMSALQASRKYGVPSRTLYDKVKKLGITTGRPMNRSIKRSPSTGGGSSSAFPYSHGYGQSEPLLSSMHDSSEREKDHERHLPPTIPHPAAALLDPAFLQQAFESRGGDIAGREALHAMALAAAAHAAVNGMSTSPGTNGTARSPSPSFAIKYARPQSPAVSQYREREMMIEREKERERERELEGQREREREHERRMLDREIMEKERYQRDIEMDRERELSERRQAERDEEDGHVEDLSVSRKDSISPNPNCHLGVIVPPMNTKLPANSNDDFKTNEICKRELLNEERDQSLNHE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00241576;
- 90% Identity
- iTF_01044823;
- 80% Identity
- iTF_01044823;