Npan028687.1
Basic Information
- Insect
- Nemotelus pantherinus
- Gene Symbol
- GATA6
- Assembly
- GCA_963978885.1
- Location
- OZ022264.1:57814132-57817403[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.4 2.9e+04 -3.1 0.0 9 23 247 259 245 260 0.76 2 3 0.6 7.2e+03 -1.1 1.2 4 26 336 356 334 366 0.70 3 3 8.2e-18 9.9e-14 52.8 6.9 1 35 391 424 391 425 0.97
Sequence Information
- Coding Sequence
- ATGGAAAGTCAACAGCAACAGCAACCCCAGTCCCAAGCGCAGTCACAGTCGCAACAACAGTCAGCGACAACAACAACACCCGCACCGGAGGAGATTGAGCCGAAAAACGAGCAATTATCACCTGAGGAGAAGCTTCAGCCCAGTCCGGTGGAAACCATCGATCGCATCATTGAAAGTAATCGTCAACTAGCCGCCACGCGACGAATACTGACCACCGCCGGTACCCTGAGAGACGTCAATGACCAACAAGACATCGACGAGGATTATCAACAATCGGATTTTGTGCAAATGACGCCACGAAACGAGGAAGGACATCCAACCTACGCGACTTATGGAACTATTCCTCCAGATGCCGTTATAGTGTGCGagggaaaaattaaaacagaaGACGAGGAGAAAATTTCGGAGCAATCACAAGGCACAGCAACGGTATATCAGGAAGTTGCTCGTTCGGCACAAACACTTCAAGGGCACGATCCGCAAACTACTACACTGCAGTATGCAACGGAGGCTCCATTGCAGCCAGTTCGATTCCGTTATGATCCCACCCAGCAGCAACAAATCGTTATCTACGACGAAGTTCGACATGAGCCAGGCGCTGTTACCGCGATCAGTGCTGCTGAATCTAGTCAATCTGAAGCGAAGACCTTTACGAACCTAGGAACTGTCCAAACACTGCAAGGCCCGGAGCATATACAGACCAGCGATGGATACATCCATTCGAATTATTCGTTGACGTCCAGCCAGCTGTACAATGGAGGAAACGTTTTGCTTTGCAAAGGCGATCCAACGCTGGCTTCTGCGGTACGCTCAAATGCCCATTTCAGTACGAATCATCTGGGAGCTTCAGTTCACGATGTGGGTGGCGAGAATTATTGGACAAATGGGAACATGGAGTATGCAACGACGaGCTACAGTCACGCAATACCAGAAGAATATCCAGCAAATACCGCTCAGTGGACCACATATGAAGCACTTATAAGCACTCCTAATGCCGAAATTCGCTGCACAGCTTGTACATCGATTTTGATTCGTCGCGAAAATGGCGATATATTCTGTCCCAATTGCTCATCATCGGGCATCCGATTTCAGCACGTATCACGAATGGCCGCGCGTCAACCGAAATCCAAAGCTACAGCGTCTGCCAACAACAGGCGAAACGGTATTATCTGCGCTAATTGCAAAACCTCTTCGACGACCTTGTGGCGACGCAACAACGAAGGTCAGCCGGTATGCAACGCCTGTGGACTATACTTCAAGTTGCATAACACAAATCGACCGATGAGTATGAAAAAAGAGGGCATCCAAAAGCGGAAACGGAAACCGAAAAACAACGGTACTGGTACGATGAAAGTTCCAATGACTGCATATGCAAAAACTCACCTGCCACCGATCTATCCATCGCATCTCCCACCGCACGGTGGCATCGTCTTATCCAGCAATCATGACATGCATGACATGAGCGTCCACGGCTCAAGTCATGTCGACATTGCACAGAGTCATCCTGAGACACATGCTATGATTTTGTCCCGGCATCCTGGCGGAGTTGTCACGAGCGAAAGTGCGGttcagcagcagcagcagcaccATACTCACTACACCAAGTGCGAGCCGAGTCCGCAACAAAGTGAATCGCCCCACTTGCCAACTTCGAATGTCCTTAACCGACATATTACTCAATCGGTACCTCCAATAGATGGTGGTCGAAGCCAAAACGGTGAATTGACGAGTGTTATCACCAGCACAGGAATCACTGAGCGGGCATCGAATTCCTAA
- Protein Sequence
- MESQQQQQPQSQAQSQSQQQSATTTTPAPEEIEPKNEQLSPEEKLQPSPVETIDRIIESNRQLAATRRILTTAGTLRDVNDQQDIDEDYQQSDFVQMTPRNEEGHPTYATYGTIPPDAVIVCEGKIKTEDEEKISEQSQGTATVYQEVARSAQTLQGHDPQTTTLQYATEAPLQPVRFRYDPTQQQQIVIYDEVRHEPGAVTAISAAESSQSEAKTFTNLGTVQTLQGPEHIQTSDGYIHSNYSLTSSQLYNGGNVLLCKGDPTLASAVRSNAHFSTNHLGASVHDVGGENYWTNGNMEYATTSYSHAIPEEYPANTAQWTTYEALISTPNAEIRCTACTSILIRRENGDIFCPNCSSSGIRFQHVSRMAARQPKSKATASANNRRNGIICANCKTSSTTLWRRNNEGQPVCNACGLYFKLHNTNRPMSMKKEGIQKRKRKPKNNGTGTMKVPMTAYAKTHLPPIYPSHLPPHGGIVLSSNHDMHDMSVHGSSHVDIAQSHPETHAMILSRHPGGVVTSESAVQQQQQHHTHYTKCEPSPQQSESPHLPTSNVLNRHITQSVPPIDGGRSQNGELTSVITSTGITERASNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -