Basic Information

Insect: Nemotelus pantherinus
Gene Symbol: -
Assembly: GCA_963978885.1
Location: OZ022265.1:42896647-42899967[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.12 32 7.4 1.2 5 23 156 174 155 174 0.94

2 11 9e-05 0.024 17.2 1.6 1 23 184 206 184 206 0.97

3 11 0.00023 0.06 16.0 2.3 1 23 273 295 273 295 0.98

4 11 0.00023 0.061 15.9 2.8 1 23 426 448 426 448 0.98

5 11 9e-05 0.024 17.2 1.6 1 23 515 537 515 537 0.97

6 11 0.00045 0.12 15.0 1.3 1 23 604 626 604 626 0.96

7 11 6.3e-05 0.017 17.7 2.0 1 23 693 715 693 715 0.98

8 11 0.034 9 9.1 2.2 1 23 814 836 814 836 0.98

9 11 0.17 44 6.9 5.9 3 23 848 868 846 868 0.97

10 11 1.5e-05 0.004 19.7 0.5 1 23 950 972 950 972 0.97

11 11 0.0043 1.2 11.9 2.7 1 23 982 1004 982 1004 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.12	32	7.4	1.2	5	23	156	174	155	174	0.94
2	11	9e-05	0.024	17.2	1.6	1	23	184	206	184	206	0.97
3	11	0.00023	0.06	16.0	2.3	1	23	273	295	273	295	0.98
4	11	0.00023	0.061	15.9	2.8	1	23	426	448	426	448	0.98
5	11	9e-05	0.024	17.2	1.6	1	23	515	537	515	537	0.97
6	11	0.00045	0.12	15.0	1.3	1	23	604	626	604	626	0.96
7	11	6.3e-05	0.017	17.7	2.0	1	23	693	715	693	715	0.98
8	11	0.034	9	9.1	2.2	1	23	814	836	814	836	0.98
9	11	0.17	44	6.9	5.9	3	23	848	868	846	868	0.97
10	11	1.5e-05	0.004	19.7	0.5	1	23	950	972	950	972	0.97
11	11	0.0043	1.2	11.9	2.7	1	23	982	1004	982	1004	0.99

Sequence Information

Coding Sequence: ATGGATGTCAATCCAGAAAACGGCAAATCAGTATTCGTAAAACAGGAAGAAAATGAAAGCGAAACGGAATGCTTCGAGGAGTTATGGGATCCAAATAATGATGAGCTTCCATGTAGTTCACAATCAGATAATCTTATATGTGGTGAAGTTTTACTAGTTTGCCATAGCAGCTATGTTTTAGTGTGTGGCCTTTGCACTGACCAATTTTATAATCTGGAATTGTTCGGAGATCATTTCAATACTTCCCATTCGAGCTGCATCGATACACCAAACACTAACGAAATGAAATCGGAAATCAATTCAACTATTTTTTATGCTTCTCAAAGCCATACGGATACAGGCGAATGTTCACAGCGTTCGGTGAAGACGCTAAACTCCGGCGAAgaagattttaaaaaaagattCGATTCAACAGAATCACTTAGTACTCATTTGGTTGAGGATAGAAATAACTACAATTACTCTCAATGCAATAAACAATCTTCCAATCACTCGAGCTATACACGACACATAGGCATACACTCAAACGAAGAAAAGAGAAAAGCTAGGTTTGTTTGTCAGCCTTGCGGCAAGGATTTCAAAACAAGATTTAATTATAATcggcatttgaaaattcatgaaaGGCATTTAACCCGAACGCGCCAGAATATGATAAACGATGTTTCAAATGAGCGTCTGCAGGATCCACTACAAGAATCTAATATCCAAAATAATCCAGAAGTCGAAATTAGTTTAAGGAGCAGTATTTCCGACAATCAATCGAGCTACACACGGCACATAGGCATTCACTCAAACGAAGAAAAGAGAAAAGCCAGATTTGTGTGTCAGACTTGCGgcaaggatttaaaaaaaaagtttaattataATCGGCATTTAAAAATTCATGAAAGGCATCTAACCCGAACGCGCCAGTGTATTATAAAAGATATTCCAAATGAGCGTCTGCAGGATCAACAACAAGAATCTAATATCCAAAATACTCCAGAAGTCGAAATTAGTTTAAGGAGCAGTATTTCCGACAATCACTCGAGCTACACACGGCGCATAGGCATTCGCTCAAAGGAAGAAAACAGAAAAGCCAGgtATCTAACCCGAACGCGCCAGAATATGATAAACGATGTATCAAATGAGCGTCTGCAGGATCCACAACAAGAATCTAATATGCAAAATACTCCAGAAGTCGAAATTAGTTTAAGGAGCAGTAGTTCCGACAATCACTCGAGCTACACACGGCGCATAGGCATTCGCTCAAACGAAGAAAAGAGAAAAGCGAGGTTTGTGTGTCAGACTTGCGgcaaggatttaaaaaaaaagtttaattataATCGGCATTTAAAAATGCATGAAAGGCATCTAACAAGAACGAGCCAAAATATGATAAAAGATGTTTCAAATGATCGTTTGCAGGATCCAACTCAAGAATCTAATATCCAAAATACTCCAGAAGTCGAAATTAGTTTAATGAGCAGTAGCTCTAACAACCACTCGAGCTACACACGGCGCATAGGCGTTCGCTCAAACGAAGAAAAGAGAAAAGCCAGGTTTGTGTGTCAGCCTTGCGGCAAGGATTTCAAAACAAGATTTAATTATAATcggcatttgaaaattcatgaaaGGCATTTAACCCGAACGCGCCAGAATATGATAAACGATGTTTCAAATGAGCGTCTGCAGGATCCACGACAAGAATCTAATATCCAAAATACTCCAGAAGTCGAAATTAGTTTAATGAGCAGTAGCTCTAACAATCACTCGACCTACACACGGCACATAGGCATTCACTCAAACGAAGAAAAGATAAAAGCCAGATTTGTGTGTCAGCCTTGCGGCAaggatttcaaaaataaatttacttatAAACGGCATttggaaattcatgaaaggtATCTAACCCGAACGCGCCAGAATATGATAAACGATGTATCAAATGAGCGTCTGCAGGATCCACGACAAGAATCGAATATCCAAAATGCTCCAGAAGTCGAAATTAGTTTAATGAGCAGTAGCTCCGACAACCACTCGAGCTACACACGGCGCATCGGCGTTCGCTCAAACGAAGAAAAGAGAAAAGCCAGGTTTGTGTGTCAGACTTGCGGCAAGgatttaaaaaataagtttaattaTAATCGGCAtttaaaaattcatgaaaagtatctAGCCCGAACGCGCCAGAATATTATAAAAGATATTTCAAATGAGCGTCTGCAGGATCAACAAGAATCTACTATCCAAAATACACCAGAAGCGGAAATTAATTTAAGGTGCAGTAGTTCCGACATGaaaacaacaacaaatacgTTGAAAAACGACGAAAATGATCGCCATGCGTCCTTTGAAGCAACGAAAACGGAAACACTTTTCAACAAAATCGAAGGAGTGGTCCGTGAAAACGATGAAACGAGAGATATTGAATCGCCTGACTCGACACCAAATGGAActttcaaatgcaagcaatgtAATCGAGAAATGAACAATCGTTTTGCATTCAATCGGCACGTCGAAAGTCATTTACTGCGAAAATTTGGTCGAGCCAAATACTGGTGCAGAATATGCGATCAACGGTTCGTCCATAAATCCAGCTGTAATcgccatgaaaaaaaacatctggAAATCGCACTTCCGTTTTACACCCAGATGACGATGCAGGAGTCTTCAACGCTGGGAAATAACATAAAAGAAATGCCATCAACTCGTGACGATGGGGAAGCTACTgCGAAAACTATATCTGAAACCGATCAAAGATCACAAAATTATGCCCTGATATCAGCCAAACAACAAAAGGAAATGATGGAATTTTTCATGCAGCGGCCAAACCTGATTAATAACATTCCGCCAAATAGTAATCAGTTTCGTTGTGATGAGTGCGGTAAATATTTTCCGACGAGCTATAGCCTTCGGGGGCACTATGAAATTCACAGGCTTCGTAAACTAAAGGTACACAAATTCAAGTGTCAAATATGTGAAATGggctttttgacaagatttaaTTATACGCGGCATTTGAAGAGACACGAGAAAAGGAAAGAACTGAAGCCTTCTTGTGAAAGAAATGATGATGTTGGGGTTAATACTTCGTCGTAG
Protein Sequence: MDVNPENGKSVFVKQEENESETECFEELWDPNNDELPCSSQSDNLICGEVLLVCHSSYVLVCGLCTDQFYNLELFGDHFNTSHSSCIDTPNTNEMKSEINSTIFYASQSHTDTGECSQRSVKTLNSGEEDFKKRFDSTESLSTHLVEDRNNYNYSQCNKQSSNHSSYTRHIGIHSNEEKRKARFVCQPCGKDFKTRFNYNRHLKIHERHLTRTRQNMINDVSNERLQDPLQESNIQNNPEVEISLRSSISDNQSSYTRHIGIHSNEEKRKARFVCQTCGKDLKKKFNYNRHLKIHERHLTRTRQCIIKDIPNERLQDQQQESNIQNTPEVEISLRSSISDNHSSYTRRIGIRSKEENRKARYLTRTRQNMINDVSNERLQDPQQESNMQNTPEVEISLRSSSSDNHSSYTRRIGIRSNEEKRKARFVCQTCGKDLKKKFNYNRHLKMHERHLTRTSQNMIKDVSNDRLQDPTQESNIQNTPEVEISLMSSSSNNHSSYTRRIGVRSNEEKRKARFVCQPCGKDFKTRFNYNRHLKIHERHLTRTRQNMINDVSNERLQDPRQESNIQNTPEVEISLMSSSSNNHSTYTRHIGIHSNEEKIKARFVCQPCGKDFKNKFTYKRHLEIHERYLTRTRQNMINDVSNERLQDPRQESNIQNAPEVEISLMSSSSDNHSSYTRRIGVRSNEEKRKARFVCQTCGKDLKNKFNYNRHLKIHEKYLARTRQNIIKDISNERLQDQQESTIQNTPEAEINLRCSSSDMKTTTNTLKNDENDRHASFEATKTETLFNKIEGVVRENDETRDIESPDSTPNGTFKCKQCNREMNNRFAFNRHVESHLLRKFGRAKYWCRICDQRFVHKSSCNRHEKKHLEIALPFYTQMTMQESSTLGNNIKEMPSTRDDGEATAKTISETDQRSQNYALISAKQQKEMMEFFMQRPNLINNIPPNSNQFRCDECGKYFPTSYSLRGHYEIHRLRKLKVHKFKCQICEMGFLTRFNYTRHLKRHEKRKELKPSCERNDDVGVNTSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -