Basic Information

Insect: Nemotelus pantherinus
Gene Symbol: RREB1
Assembly: GCA_963978885.1
Location: OZ022265.1:71405512-71410663[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0031 0.83 12.4 0.6 1 21 162 182 162 184 0.95

2 14 0.0018 0.49 13.1 0.1 1 23 194 216 194 216 0.98

3 14 2.4e-05 0.0064 19.0 7.5 1 23 222 244 222 244 0.98

4 14 5.7 1.5e+03 2.1 0.1 2 23 355 378 354 378 0.73

5 14 0.065 17 8.2 3.1 2 21 384 403 384 404 0.94

6 14 0.0086 2.3 11.0 0.1 1 23 606 628 606 628 0.97

7 14 3.3e-05 0.0088 18.6 0.9 1 23 637 659 637 659 0.99

8 14 0.00086 0.23 14.1 2.0 1 23 665 688 665 688 0.97

9 14 0.0049 1.3 11.7 2.2 1 23 998 1021 998 1021 0.96

10 14 0.00039 0.1 15.2 0.7 2 23 1313 1334 1312 1334 0.97

11 14 0.15 40 7.1 6.3 1 23 1340 1363 1340 1363 0.97

12 14 1.8 4.7e+02 3.7 6.3 1 23 1427 1449 1427 1450 0.96

13 14 0.063 17 8.3 0.9 3 23 1498 1518 1496 1518 0.92

14 14 0.0026 0.68 12.6 4.8 1 23 1524 1546 1524 1546 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0031	0.83	12.4	0.6	1	21	162	182	162	184	0.95
2	14	0.0018	0.49	13.1	0.1	1	23	194	216	194	216	0.98
3	14	2.4e-05	0.0064	19.0	7.5	1	23	222	244	222	244	0.98
4	14	5.7	1.5e+03	2.1	0.1	2	23	355	378	354	378	0.73
5	14	0.065	17	8.2	3.1	2	21	384	403	384	404	0.94
6	14	0.0086	2.3	11.0	0.1	1	23	606	628	606	628	0.97
7	14	3.3e-05	0.0088	18.6	0.9	1	23	637	659	637	659	0.99
8	14	0.00086	0.23	14.1	2.0	1	23	665	688	665	688	0.97
9	14	0.0049	1.3	11.7	2.2	1	23	998	1021	998	1021	0.96
10	14	0.00039	0.1	15.2	0.7	2	23	1313	1334	1312	1334	0.97
11	14	0.15	40	7.1	6.3	1	23	1340	1363	1340	1363	0.97
12	14	1.8	4.7e+02	3.7	6.3	1	23	1427	1449	1427	1450	0.96
13	14	0.063	17	8.3	0.9	3	23	1498	1518	1496	1518	0.92
14	14	0.0026	0.68	12.6	4.8	1	23	1524	1546	1524	1546	0.99

Sequence Information

Coding Sequence: ATGAATCAGCAACAGATGCAAGTGGTCAGCATGGAACAGCATCGTCGCGATTCCATCACATCCGAGTCATCCGTTGAAGCAATAGATCTGGCTCGAATGCCGAACCGGACGAGAAGCGACACTAGGCACAACGACTCGAGCCCGAGCCATTCAGATAACAACGACACCGATAACTACGAATCCGATGCGGAAGAAGAGTATTCGACGAGCAGGAAGAACGATCCGAAGGTTGGCCAGGACGGACAACGACGCAGCTCAAGGAACAGTTCGAATGGCGGACACGTTCGGAAAAAGATCCGAAGTAGCACGCCTAATCGCAGCAGCATTGGAAACAGTCATAACAGCAACAATAACAACGGCATATTTGCAGCTACACTTGCTGCAGCCGACCGCACTCACAACGAATCTGGTTTTGTGGATACCAGTAGCCAGCATCTGAACTCTAGTCCGGAGCCGGGGCCCATTGAACGCGACGACGTCAAGTATATCTGCCCCATATGTGACGTGGTCTCGGCCACTCCACACGAATTCACCAATCACATCCGATGCCATAACTATTCGTCGGGAGACACCGAGAACTTCACATGCCGCATCTGTTTGAAGGTGCTCTCGTCAGCCTCGTCATTGGACCGTCATGTTCTGGTGCATACCGGCGAGCGCCCATTCAACTGCAAGTATTGCCACCTAACGTTCACCACGAACGGGAATATGCATCGGCATATGCGCACCCATAAGCAGCACATGCAGCAACGAAACGCCAATGCCACGGGAGCTGGATGTGGCACCGGGGGCGGAAACAGAAGCAGTATCAGCGCTGGCAGCGCGAGCGGCGGCAGTGGCAATGGCGATGGAGAAAGCGACGAGAGCGATGGCTGTTCCACAGACTCCAGCGCGAGCAGCTCcaataacaacaataacaaccacagCAGCAGCAATAATATCTACAAGCGTAAAAGCTTGGACGACGACAGCGGTATCATGAAGCGACGCATCAAAaccatcaacaacaacaacatcatcAGCGAAACAGAGTTCGAGTATACTGGCTCCATGCAGAAACTATCTTGTCCAATGTGCAACAAAAGTGACTTTGCCAACATGTTCGCGCTGGGGACGCACATGGACCGCGAACACCCCGGTATCCCTGCAAAGTGCAGGCAATGCGAAATGGTGTTCAAGAGCCACAAGTCCTTGAACGCGCATCGCTGCGCGCAGAAAACAAACGTGACACAAGGGTTCAAGGATATGACGTTTGTGGACTTTTCGAGCGAAAAGTTCCCGTTAATCGCCAAGTCGCTGTGCGAGCAGTCGATTCACACGCCAGTGACCAGCCAAAAATACGAATGCCTAAAATGCTTTCGCGCCTTTCCCTGTGCCAGCGCCGTTGATATCCATGCCAAAGACTGTGGCGACTCTCCACAGGACTACTCGATGCGAAAACGGGCATCGAGCGAAAGTTCGGAAGAAGAAACGCGCCGAGATGAATTTTTTGCTCATTTGGATTTACGGAACAAGTCTGCCATGAGTTTGGCCAGCACAATGTCATCTCCACGAACATCTGAGAAGTCAGATACAAACGCAAAAGTCGATCACGAGAAGACACTGCAGacaagcagtttcaattgcagCGAGTCGAAAGACCTAGCCGATATCCAGTCGATATTGAATGTGACCTCCTCATCGAACAGTTTTCTGAAGAACTTCGAAAGTGTGGTGAACACGCCACCGAATAACGACTACCTACTCGGAAAGGACGAAGAGGAGGCACAGGACGCGTTCACATCTGAGTTCCGAAAAATGAAGCTTCGGGGCGAGTTTCCATGTAAGTTATGCACAGCAGTTTTTCCTAATTTGCGCGCCCTGAAGGGACACAACCGAGTACATCTGAGTGCAGCGGGAGCGGGTCCGTACCGCTGCAACATGTGTCCATATTCAATCCATGACAAGGCTGCCCTGATTAGGCACATGCGCACCCACAACGGGGACCGACCGTACGAGTGTGCTGTGTGCAATTATGCCTTCACCACGAAGGCAAACTGTGAAAGGCATTTACGTAACAGACACGCGAAGACCACGCGCGAGGAAGTGAAAAGGGCCATCATCTACCATCCTTCAGAGGACTCTAGCTGTGAGGATCCCATCAAAAAGCTACAAATGTTCTCCTCGCCAGAACTTGAAGATGATGAACCGCCAAGCGCTCCGAAGGACCGTTCCACGCCAGTTTCGCACCTGAAGGAGATGCTGCAGTCCAGCAGTCCTAtaaaaattcaagtcaaaagtATAGAAAAACTAATGGATAGTCCCAGCGTACCGATTTTGGCACCGGAGGAAAAGATTCGGAATCCGGAGCCAATTTCGATTGTGGATAGCTCACATCCAATCGACTTAAGCATGGATGTCCTGGACCTTAGCAAGAAAGTGAAAATAGAAGAGCCCAAATCTACCGAAAAAGTCGAACCGAAGTCAGCAGATCCGCCCTTGATGGAAAAGAACCACAATTGGCTGCTCACTCAGCAGCAGCTATTCAAGGATTCGCTTGCCCAAATCGATCCGGCACATTATCTTCAACTGTCACAGCTCTACCGTAACCTGATGTTCCCATCGATACCGCCTTTCCTGTTTCCCAATACATTTCTTCCGAATACTTTTGGGGATCTGAGCAAGTTTCCTCCAATGCTGTTAAATCCAATGTTTCCAGCTCAGCCCGACGCAAGTCAGGAATCACCCACAATACGACCGCAGCCTTCCTACACGACTCCGCACTCTCCTTTGAAACCAATTGATAATCAATCTCAAAAAGTACCGGCTCCCATGCAACTTCATGCCACGGTGCCCCAGCAATTGAATATCCCTCGCCATCCATTGGGGAGTCCTCAAGCATCTTCGAATCTAATGCCACAAATCCAGAACACAGGTCCTGTAAAAATGGTGATCAAAAACGGAGTTCTGATGCCGAAGCAGAAGCAGCGACGCTACAGAACTGAGCGACCGTTTACTTGCGAACATTGTGCAGCCCGGTTCACATTGCGCTCGAATATGGAGCGCCACGTGAAGCAACAACATCCGCAATTCTGGGCACAGAGACAGCGAAGCGGCCATCACATCATGCGTCGAAGCGCCTCTGTGATGTCACAAATAAGCTCGACCTCGGTATCACCACAAGCACAAGCAACTGGCTTGTCACCAAATCACTTTTCAGCAATCTCAGACCAAGTAAAATACGCAATTTTGGCGCAACAACTGAAAGCAAGGAAAGAGACGGATATCCTGCAGCAGGCCTTGACGCAGAGCAAACATTCAGAGAGCAGCCATATGAATATATTCAACAACAATGCTCCTCAAAATATGCCAATGAACAATGGCATCGAAGACGACGACCCGAAACTTGTAATAGACGAGGGCAATGAGGGAAACGATGAGGCTGAGGAAGACGATGACGACGACGAAgtttatgaagaatcaaaacCCGAGGACCTTTCAGCGAATATAAATATACACTCAGTGGCGAAGAAAGTGGCAGAAAACATACTTGAAGAGGCTAGAAAGGAGAACGCGAAGCCTTTGGTGAATATGGCGACGTCCCGTGAGGACAACGAAGAGGAACCACCCATGAGAGCGTCGAGTCAAATGCTGGCGCAGGCAGAGTCTATAGGTAAATACTTGAAAAAAGTGGCGAGCTCATCATTCAAGGAAGACTCATCGGACCTTGTGTCTGTTTCGAAACTCGTGGACAACGCCACCAACTCTCTTTCGACTTTTAACAACTACTTTCGTCCAACCGATATGGCCAATCACATGGAGCAAAGTGACGAGGAAGGACTAGTAGCGTCAGGCAGTACATCCGAAGGCAACAACTCTGGCAACGAGGAAGCATTGGGTCCAAATGGGCGGGAAGGTAAACGCAAGTCAGCGTACAGTCTGGCTCCGAACCGGGTCTCGTGTAATTACTGCCAGAGGACATTCCCGTGGACTAGTTCGCTGCGTCGGCACATTCTCACGCACACCGGGCAGAAGCCGTTCAAGTGCTCTCACTGTCCGCTTCTGTTCACCACGAAGAGTAACTGCGACCGCCACTTGCTTCGCAAACACGGAAACGTAGAGTCTGCGGTCTCACTTTATGTGCCGATCGATGACATCCCGGACCCCGTTCCGGTCCCGCGTGTCGAAGAGCCTCTTGAAGAAATGCAAAAGACTCCGCCGATGCCTGCAAACAATCTGAATTTGAACGTGCCGAGCATGAAGCCAGTAGAGCCTCTTATATCGTCGTCAGATTTGCCTTTCAAGTGCCATTTGTGTGATAGTTCATTTGCGGAGCGCAATCAATGCCTGGAACACATAAAAATGCATCACTCGCAGGAGTTTGCCCTGTTGCTAGCCAAAGGGGCTGTTGATATGGAAGGGGACTACAACCAAATTCATTCGACGGAGGACGATGAGCGTGGCGGGGAGGGTCGTGGAAAATACCCGGACTATGCTAACCGAAAGGTGATGTGTGCTTTCTGCATGCGTCGGTTTTGGTCCACCGAAGACCTGCGGCGCCATATGCGCACTCACTCAGGCGAACGGCCTTTTCAGTGCGATGTGTGCCTCCGAAAATTCACCCTCAAACACAGTATGCTCCGCCATATGAAGAAGCACAGCAATGGGCACAGCAACCACCAGTCGAGCATGATGAACAGCGGCTCTGACATGTCGGAGGATGAGCAGCCAACCTCAATGCTACACAAGAATCCACTGATCACTCAAAAGATTCGCGAGGCATTGACGCGAGCGGAAGCGTGGCGTGCAGCCAATAATATGAGTAGTGAACAGAAAGAAAACATTGCTCAACAATCGCTAAGAAAGACAAAGGCCGACAAGGACGGCTCTGGTACAAGCACTAGCACCGAAGACAACTCGGACCTGATCAGCGACCTTTTGGGCATCACAGGACCGGGAATCCTCAACAAACTCCTGTCCTCAGCCGACGAAGCGGCCAAACTGCTCGGTGTCGACAAATAG
Protein Sequence: MNQQQMQVVSMEQHRRDSITSESSVEAIDLARMPNRTRSDTRHNDSSPSHSDNNDTDNYESDAEEEYSTSRKNDPKVGQDGQRRSSRNSSNGGHVRKKIRSSTPNRSSIGNSHNSNNNNGIFAATLAAADRTHNESGFVDTSSQHLNSSPEPGPIERDDVKYICPICDVVSATPHEFTNHIRCHNYSSGDTENFTCRICLKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHMQQRNANATGAGCGTGGGNRSSISAGSASGGSGNGDGESDESDGCSTDSSASSSNNNNNNHSSSNNIYKRKSLDDDSGIMKRRIKTINNNNIISETEFEYTGSMQKLSCPMCNKSDFANMFALGTHMDREHPGIPAKCRQCEMVFKSHKSLNAHRCAQKTNVTQGFKDMTFVDFSSEKFPLIAKSLCEQSIHTPVTSQKYECLKCFRAFPCASAVDIHAKDCGDSPQDYSMRKRASSESSEEETRRDEFFAHLDLRNKSAMSLASTMSSPRTSEKSDTNAKVDHEKTLQTSSFNCSESKDLADIQSILNVTSSSNSFLKNFESVVNTPPNNDYLLGKDEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRVHLSAAGAGPYRCNMCPYSIHDKAALIRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTREEVKRAIIYHPSEDSSCEDPIKKLQMFSSPELEDDEPPSAPKDRSTPVSHLKEMLQSSSPIKIQVKSIEKLMDSPSVPILAPEEKIRNPEPISIVDSSHPIDLSMDVLDLSKKVKIEEPKSTEKVEPKSADPPLMEKNHNWLLTQQQLFKDSLAQIDPAHYLQLSQLYRNLMFPSIPPFLFPNTFLPNTFGDLSKFPPMLLNPMFPAQPDASQESPTIRPQPSYTTPHSPLKPIDNQSQKVPAPMQLHATVPQQLNIPRHPLGSPQASSNLMPQIQNTGPVKMVIKNGVLMPKQKQRRYRTERPFTCEHCAARFTLRSNMERHVKQQHPQFWAQRQRSGHHIMRRSASVMSQISSTSVSPQAQATGLSPNHFSAISDQVKYAILAQQLKARKETDILQQALTQSKHSESSHMNIFNNNAPQNMPMNNGIEDDDPKLVIDEGNEGNDEAEEDDDDDEVYEESKPEDLSANINIHSVAKKVAENILEEARKENAKPLVNMATSREDNEEEPPMRASSQMLAQAESIGKYLKKVASSSFKEDSSDLVSVSKLVDNATNSLSTFNNYFRPTDMANHMEQSDEEGLVASGSTSEGNNSGNEEALGPNGREGKRKSAYSLAPNRVSCNYCQRTFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPIDDIPDPVPVPRVEEPLEEMQKTPPMPANNLNLNVPSMKPVEPLISSSDLPFKCHLCDSSFAERNQCLEHIKMHHSQEFALLLAKGAVDMEGDYNQIHSTEDDERGGEGRGKYPDYANRKVMCAFCMRRFWSTEDLRRHMRTHSGERPFQCDVCLRKFTLKHSMLRHMKKHSNGHSNHQSSMMNSGSDMSEDEQPTSMLHKNPLITQKIREALTRAEAWRAANNMSSEQKENIAQQSLRKTKADKDGSGTSTSTEDNSDLISDLLGITGPGILNKLLSSADEAAKLLGVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -