Basic Information

Insect: Nemotelus pantherinus
Gene Symbol: L
Assembly: GCA_963978885.1
Location: OZ022263.1:202547146-202556938[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.46 1.2e+02 5.5 5.8 1 23 24 46 24 46 0.98

2 18 2.4e-07 6.3e-05 25.3 3.1 1 23 52 74 52 74 0.99

3 18 2e-05 0.0053 19.3 0.2 1 23 80 102 80 102 0.98

4 18 0.38 1e+02 5.8 0.2 10 23 170 184 162 184 0.90

5 18 0.0026 0.69 12.6 0.7 2 23 208 230 207 230 0.96

6 18 0.067 18 8.2 0.5 1 23 325 347 325 347 0.95

7 18 0.035 9.3 9.1 0.5 2 23 356 377 355 377 0.95

8 18 0.00011 0.03 16.9 1.2 1 23 385 410 385 410 0.91

9 18 3.9 1e+03 2.6 0.1 1 19 415 433 415 435 0.91

10 18 0.24 63 6.4 0.6 1 23 445 468 445 468 0.97

11 18 0.0041 1.1 12.0 1.7 1 23 501 523 501 524 0.96

12 18 2 5.3e+02 3.5 0.9 1 23 687 711 687 711 0.89

13 18 0.001 0.28 13.9 4.6 2 23 720 742 719 742 0.96

14 18 0.014 3.8 10.3 0.1 1 23 748 770 748 770 0.96

15 18 0.85 2.3e+02 4.7 0.5 2 23 778 799 777 799 0.96

16 18 2.8 7.6e+02 3.0 0.5 2 23 886 907 886 907 0.93

17 18 0.0043 1.2 11.9 0.0 1 23 917 939 917 939 0.97

18 18 0.14 36 7.2 0.3 1 23 946 968 946 968 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.46	1.2e+02	5.5	5.8	1	23	24	46	24	46	0.98
2	18	2.4e-07	6.3e-05	25.3	3.1	1	23	52	74	52	74	0.99
3	18	2e-05	0.0053	19.3	0.2	1	23	80	102	80	102	0.98
4	18	0.38	1e+02	5.8	0.2	10	23	170	184	162	184	0.90
5	18	0.0026	0.69	12.6	0.7	2	23	208	230	207	230	0.96
6	18	0.067	18	8.2	0.5	1	23	325	347	325	347	0.95
7	18	0.035	9.3	9.1	0.5	2	23	356	377	355	377	0.95
8	18	0.00011	0.03	16.9	1.2	1	23	385	410	385	410	0.91
9	18	3.9	1e+03	2.6	0.1	1	19	415	433	415	435	0.91
10	18	0.24	63	6.4	0.6	1	23	445	468	445	468	0.97
11	18	0.0041	1.1	12.0	1.7	1	23	501	523	501	524	0.96
12	18	2	5.3e+02	3.5	0.9	1	23	687	711	687	711	0.89
13	18	0.001	0.28	13.9	4.6	2	23	720	742	719	742	0.96
14	18	0.014	3.8	10.3	0.1	1	23	748	770	748	770	0.96
15	18	0.85	2.3e+02	4.7	0.5	2	23	778	799	777	799	0.96
16	18	2.8	7.6e+02	3.0	0.5	2	23	886	907	886	907	0.93
17	18	0.0043	1.2	11.9	0.0	1	23	917	939	917	939	0.97
18	18	0.14	36	7.2	0.3	1	23	946	968	946	968	0.96

Sequence Information

Coding Sequence: ATGTATGTTATTAAAAGTGACAACCTGAAGAAAGTTCCCGTGAAAACGaGTCATGCCGAACATCTTCCATTCAAATGCGATTACTGTGCACGTCTATTTAAACACAAACGGTCACGTGATCGTCACACAAAACTCCATACGGGCGATCGTCGCTATAGATGTCCACATTGCGAGGCTGCGTTCTCCCGAAGTGATCATCTCAAAATTCACATGAAAACGCATGATACGCAAAAACCATTCCAATGCACAGTATGTAATCGAGGCTATAATACCGCAGCTGCGTTAACATCACACATGCAAAACCATAAAAAGCAAGCAGCACTGCTAGGAGGTGGTCAAACGCTTAATTTTAGTCCCAGATCAACGGGATCAGGATCGAGCTCAGGAAGTTTTAATAAACGCCGATACGCAATGACCGAATGCTCTTCTCCATCGCGACCCGATTACCATCGCAAACACGGTCGCATGGGCTCATACATCGCCTGCATCTACTGCACAAAATCTGATTTCACAAGTCTCGATCAACTCAATGTTCACATTCAAACAATGCACGAACAGCACGCTACAGCCAAAGACGCAATGCATCCAGCCTGCCCACCAGGAACATCCGTTTTTCAATTGTCCTGTGAATATTGTACAATGAAATTCCCCAACATCCCCACAATGTTCCAGCATATGCGAACGACTCACATCGATCGGCTGACAAGTCCCAATTCGTATTTCGAGCACTTCAATCGCCTGGCCGCGTCTGGCACGTTCAGTCCACGACTGTTGACAAACACCTCCTTGCGACCATACAGCAATGACAACGATACGAAAGTTAAAATCGAGCAGCCAAGTCCTAGCCAAGATCGACGCAGCCACGCTGGCTCGGAAAAGGACGAGGAACAAACATCGCCGACGGATCTAAGTCAGCCCAGAAAACGACAGAGTCCACAGACGCTGGACGGCCAAACTAGGAACGCTGGAGCATTTCTTTGCAATCAGTGCAATGCCGCCTTGCCCGATTTCGATACGTTTCGGACCCATCTCAAGAGCCACATATCACAGGAGGCTGCAAGTCTGGTGTGCCCGCATTGTGGCTTAACTCTGCGTGATAGTGCCGAGCACGAGAGACATGTGATCTCGCACTTTCTCATCACCAATAGCGAATTCTCCTGCTCGAACACGGGTTGCAAGAAGACGTTTTCGAAGCCAGACGAACTTCAGAAACACCTCTTCGAAAGTCATATTCAAACGATGTACAAGTGCTCACTGTGCTCCGATATCTTTGACACAAAAGTAGCTATCCAAGTTCATTTCGCCTGTACACATTCCAACGAAAGCAAATTGTTCCGGTGTTCGGCTTGTATGGAATCGTTTGGAGTTGAGAAAGAGTTCACAAACCACGTGAGGACGCGTCATTCCAATAGTGGCTCGGCCATCCAATGCATATTCTGCAGAGCGGTTTGTTCATCTGAACTTGAAATGCACTTCCATTTGGCAGCTCATGCACGTCAGTTTCGCTGTCCTGCATGCCCAGAAACTTTCCATGTCGAGTTCCTTCTTGATAGACACATACAAACACACCACTCGCAAAAGGACTCCATGTCAAATGCAAACACTTCAGGACCGTTACCGACAGCCTCATCATCCGGTCCTGCAGCCACTGACAGCCTGCCATTGAACTCCTACCATGGGTCATTCAACAAACAATCTGCCGGGCcgaacaataacaacaacaataacatcCTCGAATACAGCGCCTTTGCAGCGAGCAAGTCATTGCTACAGTTCCCCGGTAGCAAGTTGTACAGTCCTCTTCAAGTTGACACCAATGCTGTGGGCAACTTGGCCAAGCACTCAGCGTTGATGTACGGACTCAGCCAACGGTACTTCGATGCCAACAAGACGCTAATGGATATTTACAATTACAATCAGGAGAATAAAACCATGTCGCCGTACTTCATGAATCCTGGCAACTTGGACGCGAGTCGAGCAGCCGCCTCCATGAAATCTCATCAGCAGCAGTCCGAGAGCAAATCGTCCGGGGACCGCAGTACCAGCTCCCAGAACGGATTCAGCTGCGGAATCTGCGAGCGTTCCGACTTCCGGACCGAGAGCGATGTGCATTCGCATCGTAAAATCGTGCATAACCTGAAGACGGGGGTCAGTCTGCGATGTGCTTATTGCAGCGGCAACTTCAAATCCCGAAGCGAGCTCGAGCATCACATGAAAACGTGTCACAATTCGACCGGGAAACATAAATGCCTGATTTGCGACGAAATCTTCCCATCGCCCGCTGTCCTGGCCGAGCACAAACTGCAGCACTCCAAGGTCGGCCAGTCCGGCAAGTGTTCGCATTGTTCCGTGGCGCTGAATGACGTCGGTATGTTCAAATCGCATCTGAGCGAGCATAACACCGAAGGTCAGATTCCGGTACAGTGTATTTGCTGTCGACAAACACTTCATTCCGATTTCGAAGTTGGATTGCATGCAAAATTCCACACTAAATCCTCTAGCAGCCCGGAGAATGTATGCGCTTTGTGCCTGGAAACACTGCCTGCAACAACCGAATCAAGAGTCTGCGAAAAATGCTGTCGAAAGCATAACCTCAGTTCGAAATTCACCGTCCGAAACTTGGACATCAACGGAGCCCGCAACTACGTGGAGAATCGTTGCAACCTGTGCAAGATGATCCTGCCGCATGCACAGCGTCTTCAAGAACATCTAGTGGAGCACACGTTTGTCGGATGCGAGGAACGCGGCTATTCTTGCTACATCTGTTCCTCGGTATTTACGGTACCGGCCGGTCTACTTAGTCACATGCTCGAACACGGACTGCACGCACGTCCTTACGACTGTAACCTGTGTTCCGAGAAGTATTTCTTCCGCGCCGAACTGGACAACCATCTGATCGAGCACGAAATTCTCGGCCGGACCTCAACTGCTTCAGAAAATATCAATGGAAGTGCTTCTGAGAGTGGTGTTGTAGCGATTAAAAGCGAACAACCATCAGAAACCGTTAAGGAAGTTGAAAGTGCTGAACCCGCTCAGCAAGCTACAATGCAGAAGAACGAGGTCAAGTCAGAGAAAGTTGAAAATTCCGATGAAAAAGCCAATCCGCCAGAAGAGGACGAAGAAGAATATATCGAGGTCGAGAAGGTTCCCGACGCACTATCGAATAATAAGACTCAAAATATAGGTGAATAG
Protein Sequence: MYVIKSDNLKKVPVKTSHAEHLPFKCDYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDTQKPFQCTVCNRGYNTAAALTSHMQNHKKQAALLGGGQTLNFSPRSTGSGSSSGSFNKRRYAMTECSSPSRPDYHRKHGRMGSYIACIYCTKSDFTSLDQLNVHIQTMHEQHATAKDAMHPACPPGTSVFQLSCEYCTMKFPNIPTMFQHMRTTHIDRLTSPNSYFEHFNRLAASGTFSPRLLTNTSLRPYSNDNDTKVKIEQPSPSQDRRSHAGSEKDEEQTSPTDLSQPRKRQSPQTLDGQTRNAGAFLCNQCNAALPDFDTFRTHLKSHISQEAASLVCPHCGLTLRDSAEHERHVISHFLITNSEFSCSNTGCKKTFSKPDELQKHLFESHIQTMYKCSLCSDIFDTKVAIQVHFACTHSNESKLFRCSACMESFGVEKEFTNHVRTRHSNSGSAIQCIFCRAVCSSELEMHFHLAAHARQFRCPACPETFHVEFLLDRHIQTHHSQKDSMSNANTSGPLPTASSSGPAATDSLPLNSYHGSFNKQSAGPNNNNNNNILEYSAFAASKSLLQFPGSKLYSPLQVDTNAVGNLAKHSALMYGLSQRYFDANKTLMDIYNYNQENKTMSPYFMNPGNLDASRAAASMKSHQQQSESKSSGDRSTSSQNGFSCGICERSDFRTESDVHSHRKIVHNLKTGVSLRCAYCSGNFKSRSELEHHMKTCHNSTGKHKCLICDEIFPSPAVLAEHKLQHSKVGQSGKCSHCSVALNDVGMFKSHLSEHNTEGQIPVQCICCRQTLHSDFEVGLHAKFHTKSSSSPENVCALCLETLPATTESRVCEKCCRKHNLSSKFTVRNLDINGARNYVENRCNLCKMILPHAQRLQEHLVEHTFVGCEERGYSCYICSSVFTVPAGLLSHMLEHGLHARPYDCNLCSEKYFFRAELDNHLIEHEILGRTSTASENINGSASESGVVAIKSEQPSETVKEVESAEPAQQATMQKNEVKSEKVENSDEKANPPEEDEEEYIEVEKVPDALSNNKTQNIGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00793765;
90% Identity: -
80% Identity: -