Basic Information

Insect: Nemotelus pantherinus
Gene Symbol: salm
Assembly: GCA_963978885.1
Location: OZ022266.1:23853395-23862975[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 4.6e-06 0.0012 21.3 0.9 1 23 454 476 454 476 0.98

2 7 9e-06 0.0024 20.4 2.1 1 23 482 504 482 504 0.98

3 7 0.015 4.1 10.2 1.5 2 23 811 832 810 832 0.98

4 7 6.5e-08 1.7e-05 27.1 0.5 1 23 838 860 838 860 0.98

5 7 0.0002 0.053 16.1 2.3 1 23 870 892 870 892 0.98

6 7 0.033 8.8 9.1 3.1 2 23 1104 1125 1103 1125 0.97

7 7 3.7e-08 9.9e-06 27.9 1.3 1 23 1131 1153 1131 1153 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	4.6e-06	0.0012	21.3	0.9	1	23	454	476	454	476	0.98
2	7	9e-06	0.0024	20.4	2.1	1	23	482	504	482	504	0.98
3	7	0.015	4.1	10.2	1.5	2	23	811	832	810	832	0.98
4	7	6.5e-08	1.7e-05	27.1	0.5	1	23	838	860	838	860	0.98
5	7	0.0002	0.053	16.1	2.3	1	23	870	892	870	892	0.98
6	7	0.033	8.8	9.1	3.1	2	23	1104	1125	1103	1125	0.97
7	7	3.7e-08	9.9e-06	27.9	1.3	1	23	1131	1153	1131	1153	0.99

Sequence Information

Coding Sequence: ATGATAAAAATTGTGAGTGGTCCTATTTCGATGAACAGGGTCTATGTAACGAGCGATCAAGAAGAAAACAGTGCATCACAACCATGTTCTCCCGCGACATCAATCGAATGCAACACAGCCAGTCCCCGACTTCATGACACCAGTCATAATAATGGATCAGCCACCGAAGATCACAACCACAATAACAACATAGCTGAAGGTCAGCTTGGTGTACCCAAGGCCCCGCAACCAGAAGATACATATCCCCCTCTAGAAATTAATCAGCAGGAAAATCTCCAGCAAAAACGAATATCATCATCGGTATCACCATTGCATGAAATCATTTCATCACCTCAACAACGATTACGGTCTGAATCTCGGGAGGAAGATGAAAATATGCATAGTTTGTCGGACGACGAAGCCGACCATGATGCTTTGGTGGACGAAGAAGCTCACGAAGACTTAGCAACGGCGACGTCACATCCACCGGACTCCGAAGATGGGATCGATCAAGCGAAAAGCGCCGTATCAGCTGCTCTGGAAAACATGATGAACAGATCGGCCAACTCCAGTCCGACCTCCGTCCTGCCGCAATTCCCGAACCCACCAATGACACTCGAAGCAATCCAAAATATGCAAATCGCGATTGCTCAGTTCGCCGCTAAAACGTTGGCGAATGGCGGAGGTGATAATGAGGCTGCAATGAAGCAATTGGCCTTTCTCCAGCAAACGTTGTTCAATCTCCAGCAGCAGCAAATCTTCCAACTGCAATTGATTCAGCAACTCCAGTCGCAGCTGGCGATGAATCAGTTGAAAAGCGATAGTCATGAAAACAATGACGAGGAAGAAGACGATGGAGAAGGTGAGGGCGAGGAAAGTGTTGCAGAGGAAGAGGAACGGTCGCAGCAAAATCATGTAGAAAATAGAATCAATAATCAAAATCGTTCACATAGGTCCAGCATGGACTTGAGCGACAGCGAGCAGAGGCATTTTAAGAATGATTGTGGTAGCAGCATGGACTTGTCCAACATCGACGAAACTGAAAAAGCCAAAGAAGATATAATTCACGCCGATGTAGAGAAAGCGGATTTGCCTGGTAGTAGAATAGGTATATCCGAAGAACCCAGCATAGCAATAGCGAAACAAGACGAAAATACACCGCTCCCGTATGGGTCAGACTTGGCGTCTAGCATTATCACGAACCACGATAATCCACCGTCCCTAGATGAACCAAATTCGCTGGAAATGCTACAGAAACGAGCTCAAGAGGTGCTGGAGTCAGCGTCGCAGGGTATTCTGGCTGGCAATTTGGCCGATGAGTTTGCATTTGGCAAGGACAAAGGCGGGGATGGCAAGAACcgaaacgaaccgtttttcaaACACCGTTGCCGATACTGTGGCAAAGTGTTCGGATCAGATTCAGCCCTTCAGATTCATATCAGATCACACACAGGGGAGCGACCCTTCAAATGTAATGTTTGCGGGAGTCGATTTACAACCAAAGGCAATTTAAAAGTACATTTCCAACGGCACGCCCAAAAATTCCCCAACGTGCCAATGAACTCGACCCCGATTCCTGAGCACCTGGACAAGTTTCACCCTCCATTGTTGGAGCAGATGTCACCAGAAACATCGCCTCAGCACCAGCCCTCCATGCCTCATGTTCCAAATGTTCCTGTTACGTTACCGCTACCATTCCCACCTGGTGCAGGGTTCCCAGGCATTCCTCTCTATCGACCTCCACTGGAAATACTTAAGTCCCTCGGGCCGTATCCCAGCCCGTTCTTCGGAGCTCTTCCGCCGATGCCGCCGAAGCGAGACCTGGAGCAACCGACCGACCTACGTAAACCACCACCACCACCCCCACCAGCTGCTGCTTCGCCGAAGATCAAAGAAGAGGTTCCCGAGGAACCCAAGGACTGCGAACCAATTAGTCTGAGGATCAAGGAAGAAAAGCGAGAGCGAGAGGAACCTGAATCTTGTGTGAGTCCTAAAAGACCAACTCCACCGCCACCTCCTCCACCTGTGACCTTGCTGCATGCAACACCGTCTGTTTCATCGGCTTCGTTAGCTTCATCAGGTCCAGAGCCCACTGTGCAAATTGCACCGACACTATTACCACCAGTTTCACTGCCATCGCAACCGCCATCACTTCACCATATGCATCATCTCTCAAGTCTCTCAAGCCTGGCTGCTAGCAGAGAACTAGATATGCACGATCGTTTGCCTTTGAATTTCACGAAATCGTCTCCTGAGCGGAGGTCTCCAATCCGCAGTCCTGTCAGCATCCCTCGCTCTCCGTTCCTAGGCCCGATGAAGCATGAGATGGCGCTGCTTCCTCGTCCTCACAGCAACGATAACTCCTGGGAAAACTTCATAGAAGTCTCGAATACGTCTGAGACGGTGAAGTTGAAGGAGCtgatgaaaaacaagaaaatcacAGACCCCAACCAGTGTGTAGTGTGCGACCGAGTGCTATCATGTAAAAGTGCACTGCAAATGCACTACCGAACACATACGGGAGAGCGGCCGTTCAAATGTCGAATCTGTGGACGGGCATTCACAACCAAAGGCAATCTGAAGACGCACATGGCAGTGCATAAAATTCGGCCACCGATGCGAAACTTTCATCAGTGTCCTGTGTGCCACAAAAAGTACTCGAACGCTCTAGTCCTCCAGCAACACATCCGTCTGCATACTGGCGAACCTACGGATCTTACGCCCGAACAGATCCAGGCTGCTGAAATCCGAGACTTTCCGCCGACAATGGTGTCGGGCTCCTTCTTTAATCCATTTGCATTTAACTTCGGCATGCCCACCCAGAACGGTCACATGGGTTCGGAATCGTCGCAAGGTGATAATGACGACGCAATGGATTGTAGTGATGATTTTGACGACGAAGACATATCCGATCATTTATCGAACGGTGGCGATAGCGATCGACCGAAATCGCGAGACGAAATGAAAGGAATGTTGgaacaaaaactaaaaatcgaaaacaatcGGCCGAAATCCGAGGCTAGTACTAGTTCGGCGCCAACTAGTCCAGTAAGTGCAATGAATAAATGTTCACCAGCTCCGTCCGATATTTCGCAAGGAGCATTGGATTTGACACCGCGCTCATCCCTACCGCAACCTCATCCTCCTCCGCCGCCACCTAATCTATTGCCGAATCGACCGCCGTTTGGAATGTTCCCGAATCTACCAATCTTCCCGCCAGTTAGTGCAACCGCCCAGAATATGTGCAATGCGATGAATTCGATTGCGCAATCAGTGATGCCAGCTGCACCGTTTAATCCGCTTGCGTTATCTGGTGTGCGAGGAAGCACAACGTGTGGCATTTGTTTCAAAACATTCCCTTGTCATTCAGCATTGGAAATACATTATCGCAGTCATACGAAAGAGAGACCGTTCAAGTGTTCGATATGTGATCGAGGATTCACAACAAAAGGAAATCTGAAACAGCATATGCTGACACATAAAATACGCGACATGGAACAAGACGCATTCAGAAATCGTGCGGTTAAATATATGAGCAACTGGAAAGAGGGTTTTGAATAA
Protein Sequence: MIKIVSGPISMNRVYVTSDQEENSASQPCSPATSIECNTASPRLHDTSHNNGSATEDHNHNNNIAEGQLGVPKAPQPEDTYPPLEINQQENLQQKRISSSVSPLHEIISSPQQRLRSESREEDENMHSLSDDEADHDALVDEEAHEDLATATSHPPDSEDGIDQAKSAVSAALENMMNRSANSSPTSVLPQFPNPPMTLEAIQNMQIAIAQFAAKTLANGGGDNEAAMKQLAFLQQTLFNLQQQQIFQLQLIQQLQSQLAMNQLKSDSHENNDEEEDDGEGEGEESVAEEEERSQQNHVENRINNQNRSHRSSMDLSDSEQRHFKNDCGSSMDLSNIDETEKAKEDIIHADVEKADLPGSRIGISEEPSIAIAKQDENTPLPYGSDLASSIITNHDNPPSLDEPNSLEMLQKRAQEVLESASQGILAGNLADEFAFGKDKGGDGKNRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHAQKFPNVPMNSTPIPEHLDKFHPPLLEQMSPETSPQHQPSMPHVPNVPVTLPLPFPPGAGFPGIPLYRPPLEILKSLGPYPSPFFGALPPMPPKRDLEQPTDLRKPPPPPPPAAASPKIKEEVPEEPKDCEPISLRIKEEKREREEPESCVSPKRPTPPPPPPPVTLLHATPSVSSASLASSGPEPTVQIAPTLLPPVSLPSQPPSLHHMHHLSSLSSLAASRELDMHDRLPLNFTKSSPERRSPIRSPVSIPRSPFLGPMKHEMALLPRPHSNDNSWENFIEVSNTSETVKLKELMKNKKITDPNQCVVCDRVLSCKSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTHMAVHKIRPPMRNFHQCPVCHKKYSNALVLQQHIRLHTGEPTDLTPEQIQAAEIRDFPPTMVSGSFFNPFAFNFGMPTQNGHMGSESSQGDNDDAMDCSDDFDDEDISDHLSNGGDSDRPKSRDEMKGMLEQKLKIENNRPKSEASTSSAPTSPVSAMNKCSPAPSDISQGALDLTPRSSLPQPHPPPPPPNLLPNRPPFGMFPNLPIFPPVSATAQNMCNAMNSIAQSVMPAAPFNPLALSGVRGSTTCGICFKTFPCHSALEIHYRSHTKERPFKCSICDRGFTTKGNLKQHMLTHKIRDMEQDAFRNRAVKYMSNWKEGFE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00793773;
90% Identity: -
80% Identity: -