Basic Information

Insect: Nemotelus pantherinus
Gene Symbol: -
Assembly: GCA_963978885.1
Location: OZ022263.1:194530074-194550711[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.24 64 6.4 2.5 3 19 30 46 28 51 0.88

2 17 0.0033 0.88 12.3 0.9 3 23 248 269 247 269 0.95

3 17 1.8 4.8e+02 3.7 3.9 1 23 292 315 292 315 0.96

4 17 0.0033 0.88 12.3 0.9 3 23 379 400 378 400 0.95

5 17 1.8 4.8e+02 3.7 3.9 1 23 423 446 423 446 0.96

6 17 0.88 2.3e+02 4.7 0.9 3 23 626 647 625 647 0.88

7 17 0.0002 0.053 16.1 0.5 1 23 674 697 674 697 0.97

8 17 0.035 9.2 9.1 0.6 2 23 806 828 806 828 0.92

9 17 0.0063 1.7 11.4 3.2 1 23 855 878 855 878 0.97

10 17 0.31 82 6.1 1.4 2 23 939 961 939 961 0.96

11 17 0.19 49 6.8 3.8 2 23 982 1003 981 1003 0.87

12 17 2.1e-06 0.00056 22.3 2.2 1 23 1009 1031 1009 1031 0.96

13 17 0.015 4 10.2 1.7 1 23 1037 1059 1037 1059 0.98

14 17 0.0037 0.99 12.1 1.4 1 23 1067 1089 1067 1089 0.98

15 17 1.1e-06 0.00029 23.2 4.5 1 23 1095 1117 1095 1117 0.98

16 17 8.8e-05 0.023 17.2 0.5 1 23 1122 1144 1122 1144 0.98

17 17 2.5e-05 0.0066 19.0 0.6 1 23 1150 1172 1150 1172 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.24	64	6.4	2.5	3	19	30	46	28	51	0.88
2	17	0.0033	0.88	12.3	0.9	3	23	248	269	247	269	0.95
3	17	1.8	4.8e+02	3.7	3.9	1	23	292	315	292	315	0.96
4	17	0.0033	0.88	12.3	0.9	3	23	379	400	378	400	0.95
5	17	1.8	4.8e+02	3.7	3.9	1	23	423	446	423	446	0.96
6	17	0.88	2.3e+02	4.7	0.9	3	23	626	647	625	647	0.88
7	17	0.0002	0.053	16.1	0.5	1	23	674	697	674	697	0.97
8	17	0.035	9.2	9.1	0.6	2	23	806	828	806	828	0.92
9	17	0.0063	1.7	11.4	3.2	1	23	855	878	855	878	0.97
10	17	0.31	82	6.1	1.4	2	23	939	961	939	961	0.96
11	17	0.19	49	6.8	3.8	2	23	982	1003	981	1003	0.87
12	17	2.1e-06	0.00056	22.3	2.2	1	23	1009	1031	1009	1031	0.96
13	17	0.015	4	10.2	1.7	1	23	1037	1059	1037	1059	0.98
14	17	0.0037	0.99	12.1	1.4	1	23	1067	1089	1067	1089	0.98
15	17	1.1e-06	0.00029	23.2	4.5	1	23	1095	1117	1095	1117	0.98
16	17	8.8e-05	0.023	17.2	0.5	1	23	1122	1144	1122	1144	0.98
17	17	2.5e-05	0.0066	19.0	0.6	1	23	1150	1172	1150	1172	0.98

Sequence Information

Coding Sequence: ATGCATACATTTCAGTATCGAACATTTTCCATCCTGAATCGGAAAAAATTCAGCAAATATTTAGAGCAGGGAAAATGGGTAGACTTCTGTGGTAAATGCGGTCTCAAGTTCAAATACAATGAGGATTATGAAATACATTGTAAACTTAAACACGGCAATCCGTCGACTGACGAGAAGACACATTTGGAGAGAGTGGCAGCTTCAATTGTTTATATCGCTCATACGTGTCCAATTTGTTATTCGAGTCATGCATACAAAAACATATTCGTATCGCatttgaaaatgaaacattCTATGGACCACGAAAGTATCCAGAAAGTGCTAGCAAAAGAATTTCTGAGCACTCGAGACGACACCAAAAACGATCAAATATTAACACAAAGCGGATCTCCGAAGAAGAGCTATGAACGTACAGTTTTTAAGCACAAATCGAAACAAACGcaggaaaatgttcaaaagcAGCAATCAGAGGATATTGATCCTGAGTCCTTTGCGGTAAATGAAGATTCACCAGCGATTGAATCAGATGAAAATCTTACCGACCCTTTACCAGCAATCACAAACATGGAGACAATTGATTCAATGACAAGTGACAACGAAATAGCGGAAGAAAAATTTGAGACTGAAATGGAACCTGCTAGCCAAGATAGTGGCAATCCATCTCAGCGTAGCACCGAAAAACCCATCTCGAATCGGAAAATAATCAGCAAATATTTAGAACAGGGAAAATGGGCAGGCTTTTGTGGCTATTGCGGTcttaaattcaaatacaaagAGGGGTTTGAGATACATCGGAAACTTAGACACGGCAATCTCTCGACTAAAGAGAAGACACAATTGGAGAAAGTGGCAGCTTCAATTGTATATATCGCTCATACGTGCCCAATATGTTGCTGGAGTAATAAACGTAAAACTCAATTGGTatcacatttgaaaataaaacattctCTGGATCCTGATAGTATCAAATCACTGCTAAGAGAAGAACTTCTGAGCACTCGAAAGGACACCGAAGACGATCAAGAACCTGCTAGCCAAGATAGTGACAATCCATCTCAACGTAGCACCAAAAAAGCCATCTCGAATCGGAAAATAATCAGTAAATATTTAGAACAAGGAAAATGGGCAGGCTTTTGCGGCTATTGCGGTCTTAAGTTCAAATACAAAGAGGGGTTTGAAATACATCGGAAACTTAGACACGGCAATCTTTCGACTAAAGAGAAGACAAAATTGGAGAAAGTGGCAGCTTCAATTGTATATATCGCTCATACGTGCCCAATATGTTGTTGGAGTAATAAACGTAAAACTCAATTGGTATcgcatttgaaaataaaacattctCTGGACCCTGATAGTATCAAATCACTGCTAAGAGAAGAACTTCTGAGCACTCGAAACGACACCGAAGACGATCAAaTATTACCACAAGGCGGATCTCGGAGAAAGAGCTACCATAGACCAACAGTCTTACAAACTAATCACAAACTGAAACAGAGGAaggaaaatgttaaaaaggaACAATCAGAGGCTATTGATCCTGAGTCCTTTGTGGTAAATGAAGATTCACCAGCGATTGAatgtgatgaaaatttggctgaatcTTTGCCAGCAATCATAAACATGGAGACAACTGATTCAATGCCAAGTGACAACGAAATAGCGGAAGAAGAATTTGAGACTGAAATGGATGTTGCAAACGAGGAATGTAGTAATGCTACTCCGCAAATTTCAAAGCAACAAGCTGATAAAAACTATGATGTTACAGTCGAAAAACGTATTACTCCTATTCGGGAAACTTCAAAGCAAAATGCTCCGAATGTTGTATCAGAAATGGAGTCCAAtgattcaataaataaaaacttatggGTGGCATTTTGTGCGAAATGTGGTCTTAAGTTCAGATACAAACTAGGGTATGAACTACATAATCAATTAAAGCACAGCGATTTGCCAGCTGAACTAAAAGACCAATTAGAGAAGAAAAGTGCTCAATATTTAGATGTATTAGAAACTGTTCTATTTGTCTGTGCTATTTGCGGTTACGGTTGCAAGTACGCTAGTGCTTTGAGAGATCATTTGAGATTGAAACATGATATGGAGCCGGGAAAACGTACGGCTACCGTCCTGGAAGAAAAGCAAAACACTCAAGCTGACAGCAATCAGATGGCTTCGATTGAGCAACTTTTAGAGCCTGATGTAGTCACTCATATTGAAGAGGCGATACGAGAGTGTCAACCAGAAACAGAAAAACCAGAgATGGTCTCGATTGAGCAACTTTTACAACCTGATGTAGTCACTCATATTAAAGAGGCGATACGCGAATGCCAACCAAAAACAGAAAAACCAGAGGATGTTCTGCTATTAGGATCAGATATGCAGTCCAACGATTCGGTAAACAAAAACTTATGGGTGGAGTATTGTACAATATGTGGTATTAGGTTCAGATACAAACTAGGGTATGAGCTACATAAGCAGTTAAAGCACAACGATTTGCCAGCTGAACTAAAAGACGAATTAGAGAAGAAGTGTGCCCCATATTTACATGTATTAGTAAATATGCCATTTGTCTGTGCCATTTGCGGTTCGTGTTGCAAGTACCGTAGTGCTTTCAGCGTTCATTTGAGAGTGAAGCATAATAAGGAGGCGGGAGAACGTAGCGCGCTCATTCTGGAAGAAAGGCAAAACAGTCAAGCTGACAGCAATCAGATGGTCTCGATTGAGCAACTTTTGAAGCCTGATGCGGTCACTCATGTTGAAGCAGCGATACGAgaattccaacaaaaaacagaaaatctAACAATTCAAAAAGGCCGTAAATGTACTGAATGTAATATGCAGTTTAAAGCCTCGAATGGCTATAATTTTCATATGCGAGTGAAGCACGGCATAATGACGAAAAGATATCAAGAAAAGTATAAAACTGATAAATACATCCCTCCTTGTGAGTGTCAATATTGTGGAAAACGATTTCATATGTCCACCGACCTCAAATTTCATGAGGCTGTACATCTAGGTGAGAAGAATCATAAATGTCCGCATTGTCCTAGAGCATTCTCTCATCCGGCGAATTTGCGTACCCATATTGACGGTCATTTGAATATTAGACGATATAAGTGCTCATTCTGTAATTTACGATTTGTTTCGAGTACCGGGAAGAAATTACACGAACGAGTGCATGCCGTTACAAAAGAAATGCCGTTTCAATGCGAAGAATGCGGGAAACTATTTTCGAAAGGGCATATCTTACGAGATCATATGTTGAAGCACAAAAACATTAGACCTTACGAATGCAATAAATGTGGTAAGACATTTTCAAGCAGACACAATTTGCATGGTCATATGAATATCCATAAGGGCGATATATTCACATGTGGGGTTTGCGGACGAACTATGACTACAAAAAAAGCCTTGAGAAATCATATGCTACTTCATGGCAACCAGAAAAAATACGTTTGCCAAATTTGCGACAAGGCCTTTGCTCAATGCGCGGGACTCTATGCACATCGAAAATCACATGAAGTCAGCGAATATCGAGCAAACACGTAG
Protein Sequence: MHTFQYRTFSILNRKKFSKYLEQGKWVDFCGKCGLKFKYNEDYEIHCKLKHGNPSTDEKTHLERVAASIVYIAHTCPICYSSHAYKNIFVSHLKMKHSMDHESIQKVLAKEFLSTRDDTKNDQILTQSGSPKKSYERTVFKHKSKQTQENVQKQQSEDIDPESFAVNEDSPAIESDENLTDPLPAITNMETIDSMTSDNEIAEEKFETEMEPASQDSGNPSQRSTEKPISNRKIISKYLEQGKWAGFCGYCGLKFKYKEGFEIHRKLRHGNLSTKEKTQLEKVAASIVYIAHTCPICCWSNKRKTQLVSHLKIKHSLDPDSIKSLLREELLSTRKDTEDDQEPASQDSDNPSQRSTKKAISNRKIISKYLEQGKWAGFCGYCGLKFKYKEGFEIHRKLRHGNLSTKEKTKLEKVAASIVYIAHTCPICCWSNKRKTQLVSHLKIKHSLDPDSIKSLLREELLSTRNDTEDDQILPQGGSRRKSYHRPTVLQTNHKLKQRKENVKKEQSEAIDPESFVVNEDSPAIECDENLAESLPAIINMETTDSMPSDNEIAEEEFETEMDVANEECSNATPQISKQQADKNYDVTVEKRITPIRETSKQNAPNVVSEMESNDSINKNLWVAFCAKCGLKFRYKLGYELHNQLKHSDLPAELKDQLEKKSAQYLDVLETVLFVCAICGYGCKYASALRDHLRLKHDMEPGKRTATVLEEKQNTQADSNQMASIEQLLEPDVVTHIEEAIRECQPETEKPEMVSIEQLLQPDVVTHIKEAIRECQPKTEKPEDVLLLGSDMQSNDSVNKNLWVEYCTICGIRFRYKLGYELHKQLKHNDLPAELKDELEKKCAPYLHVLVNMPFVCAICGSCCKYRSAFSVHLRVKHNKEAGERSALILEERQNSQADSNQMVSIEQLLKPDAVTHVEAAIREFQQKTENLTIQKGRKCTECNMQFKASNGYNFHMRVKHGIMTKRYQEKYKTDKYIPPCECQYCGKRFHMSTDLKFHEAVHLGEKNHKCPHCPRAFSHPANLRTHIDGHLNIRRYKCSFCNLRFVSSTGKKLHERVHAVTKEMPFQCEECGKLFSKGHILRDHMLKHKNIRPYECNKCGKTFSSRHNLHGHMNIHKGDIFTCGVCGRTMTTKKALRNHMLLHGNQKKYVCQICDKAFAQCAGLYAHRKSHEVSEYRANT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -