Basic Information

Insect: Nemotelus pantherinus
Gene Symbol: -
Assembly: GCA_963978885.1
Location: OZ022263.1:205246939-205260186[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00027 0.071 15.7 3.4 1 23 204 226 204 226 0.98

2 11 0.0017 0.45 13.2 9.5 1 23 232 254 232 254 0.96

3 11 0.0001 0.027 17.0 6.4 1 23 260 282 260 282 0.98

4 11 0.0004 0.11 15.2 2.3 1 23 288 310 288 310 0.95

5 11 2.9e-05 0.0076 18.8 0.5 1 23 316 338 316 338 0.97

6 11 1.4e-05 0.0037 19.8 0.1 1 23 344 366 344 366 0.98

7 11 6.2e-05 0.017 17.7 1.8 1 23 371 393 371 393 0.97

8 11 0.00011 0.029 16.9 0.1 1 23 399 422 399 422 0.97

9 11 0.00038 0.1 15.2 0.1 1 23 512 534 512 534 0.97

10 11 0.03 7.9 9.3 2.5 1 23 621 643 621 643 0.95

11 11 0.0063 1.7 11.4 5.2 5 23 656 674 647 674 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00027	0.071	15.7	3.4	1	23	204	226	204	226	0.98
2	11	0.0017	0.45	13.2	9.5	1	23	232	254	232	254	0.96
3	11	0.0001	0.027	17.0	6.4	1	23	260	282	260	282	0.98
4	11	0.0004	0.11	15.2	2.3	1	23	288	310	288	310	0.95
5	11	2.9e-05	0.0076	18.8	0.5	1	23	316	338	316	338	0.97
6	11	1.4e-05	0.0037	19.8	0.1	1	23	344	366	344	366	0.98
7	11	6.2e-05	0.017	17.7	1.8	1	23	371	393	371	393	0.97
8	11	0.00011	0.029	16.9	0.1	1	23	399	422	399	422	0.97
9	11	0.00038	0.1	15.2	0.1	1	23	512	534	512	534	0.97
10	11	0.03	7.9	9.3	2.5	1	23	621	643	621	643	0.95
11	11	0.0063	1.7	11.4	5.2	5	23	656	674	647	674	0.89

Sequence Information

Coding Sequence: ATGCCGTACTTACAGCTTGCCGATGGTATAACAGTACAGAAAGATTTAAAAGGAACCATTGCCCATACGAATAAAGGTGTCGTACGACGAATGTTTGTTGTGAACAACGATGCCTTCCAAGGAGCAACGCAACGtgTCATCACAACCGGAGGTACAGCAATTAAAAAACAGGACGTTATAAGCATAGGGATCGATAAGAATTATCAATCAGACCAATCTCATTCTTTAGCAAACGGTATCCTCGATACGAAAACCCAAACAATTCTGACCACAACAAGTGGTGGTAAAACAACACACTTCAGTCCGATTGGCCCATTACAACTAACTGCGGAAGAATGCAACGAAATTCTTATGAAACGTGCCATGGCAGCTTCGGCACAAAATCATACAACCATAACTACATCAGATGGTCATCATACAGATGACATTCTGCCGGGAATATCTGTACAAGTTcagaaagttattcaaggtctcGAAGACACGGAAGATTCACAAGCTACATCTTCGACGCACTGCAAACTCGAGCCAGTTTTAGAGATTTCGCCTAAGGTCGAAATGCCAGATCCGGAACAATCTCAATCTGCTACAACGGTTGTGAAAGAAAGACCCTACTCCTGTGATGAATGTGGCaaatcatttttgttaaaacatcATTTGACAACTCATGCTCGTGTCCATACTGGAGAACGACCTCACGTTTGCGTGCATTGCGGTAAAAGTTTCGCCCATAAACACTGTCTCAACACTCACTTGTTGCTACATTCAACCAACCGGCCATATCAGTGTAGCGAATGTAAAAAGAGCTTCACGCTGAAGCATCATCTATTGACACACTCTCGAGTTCATAGCAGAGAAAGGCCGTTTGTTTGCCAGGAATGTGGTCGATCGTTTCCGCTGAAAAGGCACCTAGTTACGCACAGCAAATTTCATGCTGGTGAACGTCCTTACGTTTGTGAGGAATGTGGCGAAAGtttcgctcaggaaaatcaTCTGATAATGCATTCTAGATTCCACGGATCATTAAATCCTTTCGTTTGTGGCGACTGTGGTGCTACTTTCCCGCGTAAATTCCAATTGGTCAATCACGGGCGAATCCATGGCAAAGTTCCGCACTCTTGTACAGTATGCGGAAAAGAATTTCTGCAAAAACGCACTTTGATTTCACATATGCGAATTCATACCGGCGACCAGCCGTTCCCTTGCACCGGATGTGGCGACGGATTTCAAACCAAAGCCGAGCTCAACCAACATATTCGCATGATGCATGGTGGTGTCAATCCAAATTCAAATGCTACGACGGTCGTTGGAGGCAATATTGTAAGTGctcagcagcagcaacaacaacaacagcagcaacaacagcaacagcagcaacaacagcaacaatcGCAACAGGCACAAACTATCCATTTACAGCATCAACcccagcagcagcagcaacaacaacaacaccaaACAGTGACGGTAGTGAGTAATCAGAATAATGCTTTAGTGACCACAATTGCTGCCTCAGATGCCTCAGGCAGACCTCAATATGCGTGTCGaGAATGCGGTAGTGCCTTTAACAGTCGTGAAGCGTTGGCCCTTCATTTGCGACTTCACACCGGCGACAAGAGCTTGATGACTGACTTATGTGCGCTAACAGCAGCTTTACCTGGTCACTTTTTAAATACTTCAAACCTGAATCAAGGCATGGCGACCGTTGTTGCAGCAAATCAAAACGTACAGAATGCAGTACCTGTTCAAATAATATCGTCGACGGGACAAGTTGTTAGTCAAGCGGTGGTGCAAAATACACCTCAACAAGCAAACGTTGTTACAGCTGTCCAGCCGATTCAGAGTGCACCCAAACCAAAAACACATTTCTGCGCCAGCTGCGGTAAAGGATTTGCTGCGAAACATGGTCTGTTGCAGCATAACCGACGTCATCCGAGCGGTTCGTGCACACTACGAACGCACGTTTGCGAATGCGGCAAAGCCTTCTTCCAGAAAAATCATCTCATGCTACATCAGCGACAGCATCTGGAAACGAAACCAAACACGCAACAGATAACACAAAATGAAACCCACCAACAGGATGCCCTAGCGCAACAGCAGTCGCAGCAGAACAACCAACAGTTGCAACAAGCtcagcaacagcagcagcaagcACAGCAACAAGCTCAAACGCAACAGCACACAATGACGCGGGAAGTATTGATCGGGAATCAACCAGTTCATGTGCAGGTTCTGCAGGGCACAAACACCGCACAGGTTATCAAATATGAAATCAATATACCCCAAGATGGTCAAAATTTAGAGTGA
Protein Sequence: MPYLQLADGITVQKDLKGTIAHTNKGVVRRMFVVNNDAFQGATQRVITTGGTAIKKQDVISIGIDKNYQSDQSHSLANGILDTKTQTILTTTSGGKTTHFSPIGPLQLTAEECNEILMKRAMAASAQNHTTITTSDGHHTDDILPGISVQVQKVIQGLEDTEDSQATSSTHCKLEPVLEISPKVEMPDPEQSQSATTVVKERPYSCDECGKSFLLKHHLTTHARVHTGERPHVCVHCGKSFAHKHCLNTHLLLHSTNRPYQCSECKKSFTLKHHLLTHSRVHSRERPFVCQECGRSFPLKRHLVTHSKFHAGERPYVCEECGESFAQENHLIMHSRFHGSLNPFVCGDCGATFPRKFQLVNHGRIHGKVPHSCTVCGKEFLQKRTLISHMRIHTGDQPFPCTGCGDGFQTKAELNQHIRMMHGGVNPNSNATTVVGGNIVSAQQQQQQQQQQQQQQQQQQQQSQQAQTIHLQHQPQQQQQQQQHQTVTVVSNQNNALVTTIAASDASGRPQYACRECGSAFNSREALALHLRLHTGDKSLMTDLCALTAALPGHFLNTSNLNQGMATVVAANQNVQNAVPVQIISSTGQVVSQAVVQNTPQQANVVTAVQPIQSAPKPKTHFCASCGKGFAAKHGLLQHNRRHPSGSCTLRTHVCECGKAFFQKNHLMLHQRQHLETKPNTQQITQNETHQQDALAQQQSQQNNQQLQQAQQQQQQAQQQAQTQQHTMTREVLIGNQPVHVQVLQGTNTAQVIKYEINIPQDGQNLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00322793;
90% Identity: iTF_01089350;
80% Identity: -