Basic Information

Insect: Nemotelus pantherinus
Gene Symbol: -
Assembly: GCA_963978885.1
Location: OZ022263.1:225221026-225226260[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00023 0.06 16.0 0.1 2 23 163 185 162 185 0.91

2 10 5.8e-05 0.015 17.8 1.6 2 23 214 235 213 235 0.97

3 10 8.9e-05 0.024 17.2 7.3 1 23 247 269 247 269 0.99

4 10 9.4e-07 0.00025 23.5 1.5 1 23 275 297 275 297 0.98

5 10 2.1e-05 0.0056 19.2 2.0 1 23 303 326 303 326 0.97

6 10 4.8e-06 0.0013 21.2 3.7 1 23 333 355 333 355 0.98

7 10 0.002 0.54 13.0 2.3 1 23 359 382 359 382 0.94

8 10 3.2e-06 0.00086 21.8 1.1 1 23 409 431 409 431 0.99

9 10 1e-05 0.0028 20.2 1.5 2 23 438 459 437 459 0.97

10 10 2.2e-06 0.00057 22.3 4.1 1 23 465 487 465 487 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00023	0.06	16.0	0.1	2	23	163	185	162	185	0.91
2	10	5.8e-05	0.015	17.8	1.6	2	23	214	235	213	235	0.97
3	10	8.9e-05	0.024	17.2	7.3	1	23	247	269	247	269	0.99
4	10	9.4e-07	0.00025	23.5	1.5	1	23	275	297	275	297	0.98
5	10	2.1e-05	0.0056	19.2	2.0	1	23	303	326	303	326	0.97
6	10	4.8e-06	0.0013	21.2	3.7	1	23	333	355	333	355	0.98
7	10	0.002	0.54	13.0	2.3	1	23	359	382	359	382	0.94
8	10	3.2e-06	0.00086	21.8	1.1	1	23	409	431	409	431	0.99
9	10	1e-05	0.0028	20.2	1.5	2	23	438	459	437	459	0.97
10	10	2.2e-06	0.00057	22.3	4.1	1	23	465	487	465	487	0.99

Sequence Information

Coding Sequence: ATGGCAAAGTTGTCCTCAGCCTGGGGCGTTCGTATGTCGGGCTTGTTTCGTACCGATGGCTTTCCCGAACAAATCTGTACAAGTTGCGTGAACGACGTGAAACGAGCTTATGCCTTTAAATTACGTTGCGAATGCTCTGAAACTACACTCTATCGGCTTCAAGaaactaataatattttgaatttagaaaattttaacttCGATTTGGCATGCACCGAAAGTCAGAACAACAACGAACTCATCGGCGACGACGACGACAATCTCAAAAACATTTCGAAAAGTTTTTGCGAAATAACCAACAACATTATAGATTGGCTAGAAGTCGAAACACGTGACGATGTAGTGGATAGTAATCTTCAGGTAGAACTGGATGCGTTACTTCAACGAGACAAACTGGTTGAAAgtaatttagaaaaattaaatcgtACAATTAAGGAGGAAAATGCACAAGATGATGTAAAGGATAATGAAAATGAACTTGTCTTGTCTTGTCCGGCGTGTCCAGAATCATTTCGGACTCGTGATATGTTAAAATCGCATATAATTGACTATCATACCGATGGAAATGTTTGTATACTGTGTAATACAGaATTTGATTGCATTTGGTCGCATTCCGACAAGCACTTACTTCCCCGACTACAATGCTCTCATTGTGATCAGAAATTCGAATATCGGCCGCTTTTAAGTGCACACCTACGAACGCATATGGTTAAGAACGAAGAAACAGGCAAACTCGAATTCAAATGTGAACTATGTCCGAAAACCTTTACCAGTCATCACGATTACACAACACACAAACGCACACATTCCGAAGATCGGCCATTCAGCTGTGATACCTGTGGGATGTCATTCAAACGGCGGGACAAGCTGAAAGCTCACATGACATCACATAGCGATGAGCGACCGTTCGAATGCACCCTATGCCAATCGCGTTTCAAACGCAAGGACAATCTCACGTCTCATTTGAAATCGGTACACCAGCAAGGCGATAAAATCCATAAATGCACTATGTGCGAAAAGGCTTTTAGATTTAGGGATAAGTTAAGAGCGCACATGAATACTCATCTGCGACTGTTCAGTTGCGAAACCTGTCATGCTGGATTCCCACGGAAAGAGAGCCTCGACCGACATATCGAACACAAACATCGAAAGGACGGAGTCGTCCAGCAGAAGTCGACGTCCAGTAACAAATCTCGAAGTAGCGACGAGAAAGAAACAAAATCATTCACTTGTGGCGTTTGCAAAAAAGAATTCAGTCTGCAGGAATCATTGAACAGTCATATGAAAACGCATGCAAAGAAGGTGGAATTGAAATGTGAGCTATGCTCGAAAGAGTTCACTCAATCGAATAAGTTGAAGAGTCATATGATTACACACACTGATCTGCGACCGTTTCAATGTACATTTTGCTCGTCAGTATTCAAGCGAAAAGATAATTTAAATAGGCACATGAAGAAGCATAATAGAAATAAAGGAACAACGCCAAGCGAATTTATTAGTGATATTAAACCCGAAATTCAAGCACAACCTGATAACGATCATTCCGATAATAAGGATGCGAACAATGCAACCGAGCTAAGTCAATTGAATAGCTGTAGTGAAATAGATAGTGTTCGAAAAgaaaattctgaaaatattgtttattcagcTGATAAATCTTTTGCAGTATTGAAAAACGTACAAAGCGATTATCATGGAATCGCAAGAGATTCTCCTTATGTTTCAACGGTTACAACTACTTTTAGCAAATCGATTAGTCATAAGGATGATAGTTCTTTTGAAGTATCTCACACTTCAAACGAATCAGTAAAACATGATAGTGATCAGATATGTGTTTTTAAGTATACTCCTACTGATAATGATGATAGCACGAACCTAAAACCAGACAGTACTGTTGAATCCAGTGGTGAAGTTGCGAGTAATAGAACGTGTGATAATCCTAGAAAATCAACCTCTCAATCCGGCGACCAAGTCGCTTCAAGCGGAAATAACGCGAAGAATTCAGCAACCGCAAACCAGTGTGAGTTGAACGGAACTTCTATTAGTACAATAAATGCTACTTTATCTGGTGCATTTAACGTGTCCGGTTTATTAGCTAGAAATCAGAACAAACctggaaaaaatcaaattgattgcTATTCTAAAGACCCTAAAACAAGCATTTCTGTGGTCACTACAAATCCTGATGAATGTCCTAAAAGTAACTTAAAAAATCTCACTATACTAAACGGCACAGATAACTCAACGTTTATGGTTCGTTCGGAAACCGGTGTTAAGAACTCAATCGAATCGGATAGTATACTAATTGATAGCAAATCTCTGGATAATTTTAGCGAAATAAGTCGTAATGATTCAATTATCACAACGgaatctatgtaa
Protein Sequence: MAKLSSAWGVRMSGLFRTDGFPEQICTSCVNDVKRAYAFKLRCECSETTLYRLQETNNILNLENFNFDLACTESQNNNELIGDDDDNLKNISKSFCEITNNIIDWLEVETRDDVVDSNLQVELDALLQRDKLVESNLEKLNRTIKEENAQDDVKDNENELVLSCPACPESFRTRDMLKSHIIDYHTDGNVCILCNTEFDCIWSHSDKHLLPRLQCSHCDQKFEYRPLLSAHLRTHMVKNEETGKLEFKCELCPKTFTSHHDYTTHKRTHSEDRPFSCDTCGMSFKRRDKLKAHMTSHSDERPFECTLCQSRFKRKDNLTSHLKSVHQQGDKIHKCTMCEKAFRFRDKLRAHMNTHLRLFSCETCHAGFPRKESLDRHIEHKHRKDGVVQQKSTSSNKSRSSDEKETKSFTCGVCKKEFSLQESLNSHMKTHAKKVELKCELCSKEFTQSNKLKSHMITHTDLRPFQCTFCSSVFKRKDNLNRHMKKHNRNKGTTPSEFISDIKPEIQAQPDNDHSDNKDANNATELSQLNSCSEIDSVRKENSENIVYSADKSFAVLKNVQSDYHGIARDSPYVSTVTTTFSKSISHKDDSSFEVSHTSNESVKHDSDQICVFKYTPTDNDDSTNLKPDSTVESSGEVASNRTCDNPRKSTSQSGDQVASSGNNAKNSATANQCELNGTSISTINATLSGAFNVSGLLARNQNKPGKNQIDCYSKDPKTSISVVTTNPDECPKSNLKNLTILNGTDNSTFMVRSETGVKNSIESDSILIDSKSLDNFSEISRNDSIITTESM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -