Basic Information

Gene Symbol
hang
Assembly
GCA_963978885.1
Location
OZ022265.1:80116623-80131976[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 0.012 3.1 10.6 1.3 2 23 241 263 240 263 0.95
2 21 0.092 24 7.7 1.7 2 22 354 374 353 374 0.93
3 21 4.1 1.1e+03 2.6 1.5 3 21 384 402 383 403 0.94
4 21 0.0078 2.1 11.1 1.3 1 23 439 462 439 462 0.91
5 21 4 1.1e+03 2.6 2.3 2 23 502 524 501 524 0.89
6 21 0.00025 0.066 15.8 1.4 1 23 564 587 564 587 0.93
7 21 0.0011 0.29 13.8 0.0 1 23 595 618 595 618 0.94
8 21 5.4 1.4e+03 2.2 0.7 2 23 631 653 630 653 0.91
9 21 8.3e-06 0.0022 20.5 0.5 1 23 728 750 728 750 0.99
10 21 0.00011 0.03 16.9 4.3 2 23 797 819 796 819 0.96
11 21 0.0023 0.61 12.8 0.8 2 23 828 850 827 850 0.96
12 21 0.00056 0.15 14.7 0.2 1 23 864 887 864 887 0.93
13 21 0.0023 0.61 12.8 2.8 1 23 911 933 911 933 0.98
14 21 0.0018 0.49 13.1 0.9 1 23 941 964 941 964 0.96
15 21 0.00052 0.14 14.8 0.6 2 23 972 993 971 993 0.96
16 21 0.031 8.1 9.2 0.1 2 23 1058 1079 1057 1079 0.97
17 21 0.00015 0.039 16.5 0.1 1 23 1114 1136 1114 1136 0.98
18 21 6.4e-05 0.017 17.7 0.2 2 23 1162 1184 1162 1184 0.90
19 21 0.014 3.7 10.3 1.6 2 23 1204 1225 1203 1225 0.96
20 21 0.00029 0.078 15.6 0.3 3 23 1238 1258 1238 1258 0.99
21 21 0.0011 0.28 13.8 1.3 1 23 1417 1439 1417 1439 0.97

Sequence Information

Coding Sequence
ATGACCGAGGAGATAATCGTCCGGGCACGGCAAAATTGCTGTCGCCTCTGCTTGGCCCCGGACAGTGAATGTGTGCCGATTTTGACCAGCTTGGCTGCTGATAAGGAACCTctttcgtcgaaaattcatGCGTGCGTCAACGTAAAGGTGAACTCCGACGATCGTTTATCACTGCGAGTATGTCATTCGTGCATAAGTTTCTTAAATTCATGGCAAAGTTTCAAAAATCGTTGCTTGGCTGCACAAATGAAGCAAATGAATTGGCTGGAAATGGCTAAAAACTCGATGCGTCGACAGATTGGTCAAATACAGCAACCAGTGCAGCCGGTTCGTTCTACGAGAAATGCAACTAATGAACGACTACATCAAAATCAGAATGCAACTAAACCAACCGGTCGTCCAATGCCTGTTCCGTTTATCATCAAAGAGGAGCCGATTGATGATGAAGCTGACGCACAAGAATCAGCGGCAGCAATTAAAGTCAATTTGGATCCAAATGAATTTTTGGACGGTAGTATTGTGCCTAAGCAAGAATTCGAAGAAGAAGAGGAAACACTTCTGGAGCCAAGTAAAATCATGAATGAAGAACCGCATATTTTGACATCGCTAGGCTTAACACAGATTAGACGAGTGAATCCTTACAACCAAATGCTGTCGAAGACCGATGGAAGTAAAAATCGAGGAGATCTCGAACATCAGACCGGTGGAACGCTTTCGACTCAATGCCGTTTTTGCAATATGAACTTCTCTTCGGCTACAAATGCTCGCAGACACGAACGTAACATTCACCAATTAAACAGTTATGGAACGTCCGAAACACCAAAATTGGGCATAAAACCTACTACGACGCGTTCCCTTTTGAAACCGTTGCAAAACTTGAAAGCGAATTTACCATCAACGTCCTTATTGAACTCGCTAAAAGGACCGCCAGCAGTGACACCTGAAATGATGGGCATCTATGATTATAACAAACCTGAGAAATATCGGCATCTCTTAACGGACTCGAAATTGGCGTTCATTCGTAAACATGAAGAGTTTCTAAAGCAATATCAAACCATGACATGTACATGCTGTCCTCAAACATTCCCGACATACAAGACATTTATGGCGCACATGCGACGTAAGTTTCCAAATTTGGCgagaaatttatgtttcaagTGTCTGAAACAGTTTCAATCGAAAACGTTTTTCGTGGCGCATCTTAAAAAGCGGAATTGCATTAATCTCTATAAGCTATATAAAAACGGAAGTAGTGATGGGTCCGGTGGCTATCCCGAGCGAGTGGGAACTAAAGAACTACTCAATAACAAAGTTTATGAGTGCAAATTGTGTTCGAAGACATTCCGTCTGAAACTGGACTTTCGCAGCCATGTTTATGAGGCACACGGCGAAAGCATCAGAAAGGATGGTTCACCAGGACGTTGTGGTTTCTGCAGCGTTGAACTAGACGATCCGTCCCTGCGACGTCGCCACTACAACAATATGGAGTGTATCGTGATGATTCATTGTGGTACGTGTAAAGAAAGATTCGAATTTCATCAGCAGTTTATCGACCATGTTTACCAAGCACATTTGCCCATCGCCGCCAATAATAATGATGTTTCAATGGAATCTGCAGACACATCCCAAACTGAACATATCTCAAATGCGAATATGTCGTATACAGACACTTTCAATTCGAGGCTGCCGCATAGTTGCAACATATGTGGACAAACGTATAACAATTACTACAACGTTCTCCGCCACATGGAAGCAAAACATCCTGACCAAGTGCCTAAACGATACATTTGTGAAAAGTGTGATATTGGGTTCCCGAGACAAGGTCCACTACGTGATCACATGTATGAGGTTCACGGGACGACGATTCCACGCGCGCGGCGCGAGCTTCTATCTTGCCGTATGTGTTCAGATCAATTCGAATCGAGAGAGAAATGGATACGCCACCAAACTGAACAGCATTCTCGATACACCTGCTGCTTCTGCGCTTTCCAAGGAAAAAGTTTGGAGAAGTTTAAGGAGCACATTGAAACACATTCACAATTGGCCCTGAAAAATGCCCCGATACCTCTTTCGTCGTCTTCAAATGTTTTATCTGTAACGAATGGAGGGAACGATGGAGACGACGAAGAGGAGGAGGAAATGCAGCAGCCAGCGAAGAAAATAAAGCTGGACTCGTCAGCTTTCCAATGCCCCGTGTGCCATGCAACATTCTCCGGCAACGTAGCCCTCTCGAATCATATGCGATCTCATTATAATAATGAAGGAGTAAAATTCCAAGGCATAgcatcattaaaaaatatttcttcgatGACAACTCCGAAGAGTACATCTACTCCTGCAGCTACTAGTAGTGAGTTAACAACAAATGGTGAGCCAATCCGGCGAATTCGTTGCCATCTATGCTCAAAGCGATTCACGTCGAAGAAAACATATCGCAAGCACATGCTAATCGAGCATAGCATTCGGAATGTAAGCTTCATAAAATGCTCGGTTTGTAAGGCAGAGTTTACACATGAAAGAGGCTTGAGGGTGCACATGTACAAGGCTCATGGTACTCTAGTTTCGAGTGATATTACGTTTAATGCGACTTACGAATGCGAGATATGTGACGCGGAGTTCAAGAGTGAAAAGTCTTTGAATCAACATAAGGGAATGGTGCATAAGAACCGAGACAAAGAACAGCCGCCGGAGTTAACTCCCGCAGCTAACCAGAACAGTCCTGCCTATTGGCACCAATGCCAATACTGCCCTGCCCATTTCGACTCTAATAAGAAACTTGCGATCCACTTGAATTCACACACTGAGTTCGATGCTCACGACTATTCATGTAAGGATTGTGGGAATGTGTATAGTGGTCGAAAGAGCTTGTGGGTGCATCGCTACAAAAAGCATCGCGAAATACCGGAGCCTTCGCCTTGTGGTATTTGCAAAAAAGTGTTCTTCTCAaataaaatgcttcaaatgcATGCGAGAAACCATACTGAAGCTGACGCCCTCGAGGAAGAAGCTCAGAATACTGAATTTGACGCAAGCCAGACTATGGAGGAGGCTGAGAATCTTGCGAAAGATGCGCCACATGGAGATGAGAGCGAAGAAGAGGAAGACCAGGAACACGATGAGGAGcaaattgaagaagctgatggtGATGATAATATACTACCGGCTAAAGTCCAGTGCGCAGTTTGTAGTGATGAGTTCAGCGATCAGGATTTGTTTGACAAACACATGGAGATGCATCAAATGGAACTGTACACTGATAACCCGTTAGCAGCGATGTTTGATACAGGTCCCGAAGATCCGAATCAATATTTTCCGAATCAGATCAGTGAAAACGACGGTTATACGTGCGATATATGTCCGAAATCGTTTCCGGCACTCACCGCACTGAAAGTGCATCGCAATTGGCACTTTCGACAAGACGCAAAATTGGTGCCTGCCGATCCAAAAATGAGACTCTTGGCCCAATCTAAAAAGGCATCTAATGTGTGCGAATTCTGTGACACAGCGTTCTCTAGCACGAGTAATCTGCGACGTCATATTGTGGAAGTTCATAATCGCGATTCGTTCAACGATCCGGTGCGAGCTCAGAAGTACATGGATAAATACATGGAATGTACGAAATGCACATTAAAATTCGACAAGAAGTCCGATTGGGTACGACACAAGATAAAGCACGCAAAGGATACTATCAACTCATCGTTTGAATGGGGATGTGAGATTTGCGGGAAAATTGTATCGAGAAAAGAACGACTGCTGCAGCACATGAATAGTCATTTGAAATCGAAAAGGGATGAGGACGACGGGAATGCTAGTGTTTTGAGTGAGGATCAAAGCAATTCACAGGACACGGTGCTATCAAACAACACGGGGCGAGGAAGTGTTGCACGCAAACCAAGGACAGGTGAAGATGACGAGGCAGAAGAAGAGAATGATGGAGAAGGGAACGCTGGAGCCAATGATAACAGTAAAATAGAAGCGGTAAATTGCCATCAGGAAAATATTGAAGAACCCGAAGAAAGTATTAATGATGTGCATGAAGAGGCGGATAGTGAAGATGAAAATGATGAAGGAGGCGATGGTTACGTAGAAGATGAACGGGACGATGAAGGAAATGCTCGAATGCAATATGACGAAGATTCGAGTCAGCAGTACCAAGAGGTCGACCCAGACCAAGAAGACATTCAGGACGAAGAAGACGAGCAGGATGAAGATGGAGAGGAAGTAGAGGATGAGGACAACATGGGAGCATATTCTTGCGACTTATGCCAGGTATATTTCGAAACGTCAAAACAGTTACGACGACATGTGACGAGTCATTTCTTAAATGGTCCCGGATCGGTGACATTGACTGAAATTCCCAAGGATAAATCCGCTTATACTTCGAAATTACAGGCAGGGGATGACGTCACAACTATAACCCcggtgtaa
Protein Sequence
MTEEIIVRARQNCCRLCLAPDSECVPILTSLAADKEPLSSKIHACVNVKVNSDDRLSLRVCHSCISFLNSWQSFKNRCLAAQMKQMNWLEMAKNSMRRQIGQIQQPVQPVRSTRNATNERLHQNQNATKPTGRPMPVPFIIKEEPIDDEADAQESAAAIKVNLDPNEFLDGSIVPKQEFEEEEETLLEPSKIMNEEPHILTSLGLTQIRRVNPYNQMLSKTDGSKNRGDLEHQTGGTLSTQCRFCNMNFSSATNARRHERNIHQLNSYGTSETPKLGIKPTTTRSLLKPLQNLKANLPSTSLLNSLKGPPAVTPEMMGIYDYNKPEKYRHLLTDSKLAFIRKHEEFLKQYQTMTCTCCPQTFPTYKTFMAHMRRKFPNLARNLCFKCLKQFQSKTFFVAHLKKRNCINLYKLYKNGSSDGSGGYPERVGTKELLNNKVYECKLCSKTFRLKLDFRSHVYEAHGESIRKDGSPGRCGFCSVELDDPSLRRRHYNNMECIVMIHCGTCKERFEFHQQFIDHVYQAHLPIAANNNDVSMESADTSQTEHISNANMSYTDTFNSRLPHSCNICGQTYNNYYNVLRHMEAKHPDQVPKRYICEKCDIGFPRQGPLRDHMYEVHGTTIPRARRELLSCRMCSDQFESREKWIRHQTEQHSRYTCCFCAFQGKSLEKFKEHIETHSQLALKNAPIPLSSSSNVLSVTNGGNDGDDEEEEEMQQPAKKIKLDSSAFQCPVCHATFSGNVALSNHMRSHYNNEGVKFQGIASLKNISSMTTPKSTSTPAATSSELTTNGEPIRRIRCHLCSKRFTSKKTYRKHMLIEHSIRNVSFIKCSVCKAEFTHERGLRVHMYKAHGTLVSSDITFNATYECEICDAEFKSEKSLNQHKGMVHKNRDKEQPPELTPAANQNSPAYWHQCQYCPAHFDSNKKLAIHLNSHTEFDAHDYSCKDCGNVYSGRKSLWVHRYKKHREIPEPSPCGICKKVFFSNKMLQMHARNHTEADALEEEAQNTEFDASQTMEEAENLAKDAPHGDESEEEEDQEHDEEQIEEADGDDNILPAKVQCAVCSDEFSDQDLFDKHMEMHQMELYTDNPLAAMFDTGPEDPNQYFPNQISENDGYTCDICPKSFPALTALKVHRNWHFRQDAKLVPADPKMRLLAQSKKASNVCEFCDTAFSSTSNLRRHIVEVHNRDSFNDPVRAQKYMDKYMECTKCTLKFDKKSDWVRHKIKHAKDTINSSFEWGCEICGKIVSRKERLLQHMNSHLKSKRDEDDGNASVLSEDQSNSQDTVLSNNTGRGSVARKPRTGEDDEAEEENDGEGNAGANDNSKIEAVNCHQENIEEPEESINDVHEEADSEDENDEGGDGYVEDERDDEGNARMQYDEDSSQQYQEVDPDQEDIQDEEDEQDEDGEEVEDEDNMGAYSCDLCQVYFETSKQLRRHVTSHFLNGPGSVTLTEIPKDKSAYTSKLQAGDDVTTITPV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-