Npan072504.1
Basic Information
- Insect
- Nemotelus pantherinus
- Gene Symbol
- ZNF711
- Assembly
- GCA_963978885.1
- Location
- OZ022266.1:65694670-65697552[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2.8e-05 0.0075 18.8 2.6 1 23 103 125 103 125 0.98 2 19 0.0071 1.9 11.2 4.0 1 23 131 153 131 153 0.98 3 19 0.0011 0.3 13.8 3.5 1 23 159 181 159 181 0.98 4 19 0.086 23 7.8 5.2 1 23 190 212 190 212 0.98 5 19 0.026 6.9 9.5 0.1 1 20 219 238 219 239 0.97 6 19 1.2e-05 0.0032 20.0 3.6 1 23 382 404 382 404 0.98 7 19 0.0028 0.74 12.5 2.9 1 23 410 432 410 432 0.98 8 19 0.0011 0.3 13.8 3.5 1 23 438 460 438 460 0.98 9 19 4.5e-07 0.00012 24.5 0.8 1 23 466 488 466 488 0.99 10 19 0.15 41 7.0 2.2 1 23 494 516 494 516 0.93 11 19 0.0019 0.5 13.1 0.8 1 20 523 542 523 544 0.96 12 19 0.031 8.1 9.2 1.2 1 23 566 590 566 590 0.93 13 19 0.011 3 10.6 5.3 1 23 595 617 595 617 0.98 14 19 0.0037 0.99 12.1 0.2 1 20 623 642 623 647 0.89 15 19 3.3e-05 0.0088 18.6 3.6 1 23 653 675 653 675 0.98 16 19 0.011 3 10.6 0.3 1 23 714 738 714 738 0.96 17 19 1.7e-05 0.0046 19.5 2.2 1 23 745 767 745 767 0.97 18 19 1.4e-05 0.0038 19.7 1.2 1 23 773 795 773 795 0.98 19 19 0.059 16 8.3 4.9 1 23 855 877 855 877 0.95
Sequence Information
- Coding Sequence
- ATGAGCGTTTTAGGTGACTTACCCTATTTGTCCAGCAGTATTTTATCCATCAAAGAGGAAGTTGAAATCGACGAAACGCAGTTGCAAGAGCAGATTTTCGATGTAGAAGTGAAACAAAGTGATGATCAAAGTGCTAAAACCGGAAAACGGAGTGAAACTCGCGAATGCCACGATgCAGAGTATAGCCAAACGGTATCGAACGATTATGAAATTAAGGAGCAACCCTTCGACTGCAAGTTATGGCCAGAAAATGACACCAAATCAGTTGAAACACATGATGCAGTCAGTCCGTCCCTAAAAAACAATCATACATGCTCGATTTGTGCGAAATCTTTCAGGTATAGGTCCAGGCTGGAAGTTCATATGAATTCCCATATAGATAGCCGGCCGTATAGATGcacaatgtgtcctaaaaagtACAGCTGTCAGGAGTACTTACGCCAGCACGAGTTGACTCACGTTTCCTTACCTCGTTTCAAATGTACGCTTTGTGAAAAGTTTTGCAGCACAAGAGCCGGCATGAAaagtcacatgaatttgcatCGTGGCGAACGTCCTTTCAGAAAATATCAGTGCACTTTGTGCAAtaagaaattcatttttgatTGTGCACGGCGTAGGCACGAGAAAACGCACTCAAATAACCATACGCATTATCAATGTGGCATCTGTAAAATGCGCTTTGCATTGGACGATCAGTACCGCAGCCACATGGTAGGTAAAAAGTGTAAAGCAAATGCTTCAAAAGAGCCATTTCAATGTTCAATGTATGCTTCTAACAGTATCTTATCCACAAAAGAGGAGGTTGAAATCAACGAAACACAGTTACAAGAGCATATTTTGGATGGAGTCGAAGAAAAACAGAATGATCTTGATGATGATCTTGCCGAAAGACagagtgaaaaaataagtgGAATATGCCATGAAATAGCTAGACTTCCTTCCACTGTTCCGTATATTATTTCCAATAAAATCGCATTTATGACTGAAGATGACCAAACTAGATCCAACCACTGTGAGGTGAATATGAAAACGAATAGTGAAAAGATAAAGGAGCAACCCTACGACTGCAATGCATGTCTGGAGAACTACACCAAATCAGTTAAAACTCATGATGAGGTCAGGCCGCCCCTGAAAAACACTCATACATGTTCTATTTGCACGAAATCGTTCAGGTATAGGTCCAGGCTCGAAGTGCATATGAACTCCCATATTGAAAGTCGGCCGTATAGATGcacaatgtgtcctaaaaagtACAGCTGTCCAGATTACTTACGCCAGCACGAGTTGACTCACGATTCCTTCCCTCGCTTCAAGTGTACGCTTTGTGAAAAGTTTTGCAGTACAAGAGCCGGAATGAAaagtcacatgaatttgcatCGTGGCGAACGTCCTTTCAGGTGCGAAATCTGTCCCAAGTCGTTTCGCACCAATGAGGCACTCTGGTCACACAAAAAAACTCATTCGGATGTCAGGAGATATGAGTGCACGttatgcaataaaaaattcattttcgatAGTATACGACGAAGGCACGAGAAGACACATTCAAATAACCGTACGCATTATCAATGTGACAACTGCGAAAAGTATTTTAAGTTGCAGGATCAGTACCGCAGTCATTTGGAAGACAACAAGTGCAAAGGGCAATCGCAAGAATCTAGCGTCCGACCGTTGGACGCTGCAAAAATGCCATTTAAATGCTCTAAGTGTGACAATAAAACATTCGCAAGCATTCAACTGCTCATACGCCACAAAGCTCAATTCCATCCGAAAAAGAATCACACATGCTCAATTTGTACGAAAACGTACAGGTGGAGATGTGAGCTTAAGATTCATATGAACTCTCATACTGGCAATCGGCCGTATGCATGCCCAGTATGTCCAAAACGATTCGCATGGCCAGGCAACTTACGCCAGCACAAtcacatgaatttgcatCGTGGCGAACGTCCTTTTAAGTGCAACATCTGTCCCAAATCGTTTAGGAGTGAACATACACTCTCGATTCACAGCAAAAAACACTCGAACAATAGTGTGAGCAACGAATGTCACAGCTTTGAAAATTGTTCTAAATTAGATCTGTGTTGCAGCCATTTAGCAGACAGTAAGCGCAAAGGACATACAtcagaaaaacaatttcaatgtTCCAAGTGTGATATTGAATCATTCGCAAGTATTGAGCTTCTCAAGCGGCACAAAGCTAAAATTCATTCGCccccgaaaaaaaatcatatctgTTCAATTTGTACGAAATCATTCAGGTCGAGATATTTACTAGACATCCATATGAACTCTCATACTGGCAGTCGGCCGTATGCATGCAAAATATGCCCTAAAACATTCGGCAATCCTGGATGCTTACGCCAACACAAGTTGACACACGATTTCTTAagcgaaaaaaatcataatcGCGCAGAAACGAAGCTTGGTGAAAATCCACAAGAGCTCCATGATATTCGAGAAAATGAGAATTGTGAAAAACAGATTCAAGCTCaaaatgaaatggaaaatatcGAAACTGATGAAATATCACAAAAGGATGTTTCTTTCGAGAAGAAGTACAAATGTGAGAAATGTGGcaagaagtttatttgcttACGAAATTTAAACTTCCATTTGAAATCGCATTCAGACATTTCGACAACGTAG
- Protein Sequence
- MSVLGDLPYLSSSILSIKEEVEIDETQLQEQIFDVEVKQSDDQSAKTGKRSETRECHDAEYSQTVSNDYEIKEQPFDCKLWPENDTKSVETHDAVSPSLKNNHTCSICAKSFRYRSRLEVHMNSHIDSRPYRCTMCPKKYSCQEYLRQHELTHVSLPRFKCTLCEKFCSTRAGMKSHMNLHRGERPFRKYQCTLCNKKFIFDCARRRHEKTHSNNHTHYQCGICKMRFALDDQYRSHMVGKKCKANASKEPFQCSMYASNSILSTKEEVEINETQLQEHILDGVEEKQNDLDDDLAERQSEKISGICHEIARLPSTVPYIISNKIAFMTEDDQTRSNHCEVNMKTNSEKIKEQPYDCNACLENYTKSVKTHDEVRPPLKNTHTCSICTKSFRYRSRLEVHMNSHIESRPYRCTMCPKKYSCPDYLRQHELTHDSFPRFKCTLCEKFCSTRAGMKSHMNLHRGERPFRCEICPKSFRTNEALWSHKKTHSDVRRYECTLCNKKFIFDSIRRRHEKTHSNNRTHYQCDNCEKYFKLQDQYRSHLEDNKCKGQSQESSVRPLDAAKMPFKCSKCDNKTFASIQLLIRHKAQFHPKKNHTCSICTKTYRWRCELKIHMNSHTGNRPYACPVCPKRFAWPGNLRQHNHMNLHRGERPFKCNICPKSFRSEHTLSIHSKKHSNNSVSNECHSFENCSKLDLCCSHLADSKRKGHTSEKQFQCSKCDIESFASIELLKRHKAKIHSPPKKNHICSICTKSFRSRYLLDIHMNSHTGSRPYACKICPKTFGNPGCLRQHKLTHDFLSEKNHNRAETKLGENPQELHDIRENENCEKQIQAQNEMENIETDEISQKDVSFEKKYKCEKCGKKFICLRNLNFHLKSHSDISTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -