Basic Information

Insect: Nemotelus pantherinus
Gene Symbol: ECU03_0790
Assembly: GCA_963978885.1
Location: OZ022266.1:42189394-42191658[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 4.8e-06 0.0013 21.2 1.4 1 23 104 126 104 126 0.98

2 21 8.3e-05 0.022 17.3 0.2 1 23 132 154 132 154 0.98

3 21 1.2e-05 0.0032 20.0 2.3 2 23 159 180 158 180 0.97

4 21 1.2e-05 0.0031 20.0 5.9 1 23 186 208 186 208 0.99

5 21 0.0016 0.42 13.3 1.3 1 23 215 237 215 237 0.99

6 21 0.01 2.8 10.7 0.7 1 21 245 265 245 266 0.94

7 21 0.38 1e+02 5.8 0.1 1 23 278 302 278 302 0.91

8 21 0.045 12 8.7 3.4 1 23 309 331 309 331 0.96

9 21 1.4e-05 0.0037 19.8 0.8 1 23 337 359 337 359 0.98

10 21 0.0003 0.08 15.6 0.8 2 23 371 392 370 392 0.97

11 21 3.2e-05 0.0086 18.6 0.6 1 23 398 420 398 420 0.98

12 21 0.061 16 8.3 5.0 2 23 427 448 427 448 0.97

13 21 0.0039 1 12.1 0.9 1 20 455 474 455 476 0.95

14 21 0.46 1.2e+02 5.6 0.4 1 23 488 512 488 512 0.92

15 21 6.4e-05 0.017 17.7 1.6 1 23 519 541 519 541 0.96

16 21 1.7e-05 0.0044 19.5 0.9 1 23 547 569 547 569 0.99

17 21 2.1e-05 0.0057 19.2 1.0 1 23 582 604 582 604 0.98

18 21 1.3e-05 0.0034 19.9 1.3 1 23 610 632 610 632 0.98

19 21 0.037 9.7 9.0 4.3 2 23 639 660 639 660 0.97

20 21 3 8e+02 3.0 0.8 1 19 667 685 667 687 0.80

21 21 0.61 1.6e+02 5.1 0.2 1 21 700 721 700 724 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	4.8e-06	0.0013	21.2	1.4	1	23	104	126	104	126	0.98
2	21	8.3e-05	0.022	17.3	0.2	1	23	132	154	132	154	0.98
3	21	1.2e-05	0.0032	20.0	2.3	2	23	159	180	158	180	0.97
4	21	1.2e-05	0.0031	20.0	5.9	1	23	186	208	186	208	0.99
5	21	0.0016	0.42	13.3	1.3	1	23	215	237	215	237	0.99
6	21	0.01	2.8	10.7	0.7	1	21	245	265	245	266	0.94
7	21	0.38	1e+02	5.8	0.1	1	23	278	302	278	302	0.91
8	21	0.045	12	8.7	3.4	1	23	309	331	309	331	0.96
9	21	1.4e-05	0.0037	19.8	0.8	1	23	337	359	337	359	0.98
10	21	0.0003	0.08	15.6	0.8	2	23	371	392	370	392	0.97
11	21	3.2e-05	0.0086	18.6	0.6	1	23	398	420	398	420	0.98
12	21	0.061	16	8.3	5.0	2	23	427	448	427	448	0.97
13	21	0.0039	1	12.1	0.9	1	20	455	474	455	476	0.95
14	21	0.46	1.2e+02	5.6	0.4	1	23	488	512	488	512	0.92
15	21	6.4e-05	0.017	17.7	1.6	1	23	519	541	519	541	0.96
16	21	1.7e-05	0.0044	19.5	0.9	1	23	547	569	547	569	0.99
17	21	2.1e-05	0.0057	19.2	1.0	1	23	582	604	582	604	0.98
18	21	1.3e-05	0.0034	19.9	1.3	1	23	610	632	610	632	0.98
19	21	0.037	9.7	9.0	4.3	2	23	639	660	639	660	0.97
20	21	3	8e+02	3.0	0.8	1	19	667	685	667	687	0.80
21	21	0.61	1.6e+02	5.1	0.2	1	21	700	721	700	724	0.89

Sequence Information

Coding Sequence: ATGAGTGATTTGGGTGATTCATCCTTTGCAAGGAAGAAAATTATATCTGTAAAGGAGGAAATTGAAATCAGCGAAACACAATTACTAGAACAGGTTTTCGATGAAGTCGAAGCGACACATGCTAACCCTTGCGTTAAAACCGAAAAACAGAGTGAAGTTGTAAATGGACAATACCACGAAACAGAAGATAATCAAACCGAATTAATCGATTGTGAAGCGATTAGGGAGCAACCATACGAGTGCATCTTGCGACCAGATGATTCCACCAGATCAGCTCGAAAACATGATATTAGGCCATCCTTGAAAAATCATACATGCTCAATTTGTGCGAAATCATTCAGGTCGAGTTCAAGGCTTGAAGTGCATATGAATGTTCATACTGGCAGTCGGCCGTATGCATGCAAAATATGCCCTAGAAAGTATGCCAGTCGATATGTCTTACGCGAGCACATTTTAACTCACGGCTCCGGACTCCAATGTACGCTTTGTGAAAAAACTTACAAATCCAGATCCCGACTGAAAAATCACATGAAGATTCATCCTAGCGAACGTAATTTCCAGTGTGAAATCTGTTCCAAATCATTCACGAGCAAGTATCGACTCTCGAGACACCATAAAACGCATTCGGctgttaaaaagaaatatgagTGCACGCTGTGCAGTGAAAAATTCGCAGATAATTACACTCGACTTAGGCACGAGAAGACGCACACAAATAACTattcaaattattatgaatGTGGAAATTGTAAAAAGTATTTTAGATTAGAGGATCAATATCGCAGCCATTTGGAAAGAAATAAGTGTAAATGCTATGCATCAGAAAAGCCATTTGAATGTTCCAAGTGTGAAAATGAATCATTCGTTAGCGTCGAGCTACTAAACCAGCATAAAATTGAAGTTCATCCACCCCCGAGAAAAAATCATGCATGCTCAGTTTGTGCGAAAGCATTCAGTTGTAAGTCTAGGGTTCGCCGTCATATGAACATTCATACTGGGAGTCGACCGTATGCGTGCACGGTATGTCCTAAAAAGTACAGTTTACGCGATAAACTTCGCCAGCACATGTTAACTCACTTAAGTGCAGAGGCAAAGAAACGCTTCAAGTTAAAATGTGCACTTTGTGAAAAGTTTTATAGTTCAAGGGGCCGACTGAATAGTCACATGAACATGCATAGAGGCGAACGTCCTTTCAAATGCGAAACCTGTCCCAGGACGTTTGCGAGCCCAGGTACACTCTCCTCACACAAAAAACTGCATGCAGATGATGGGGAAAATGAGTGCACATTATGCAATCAAAAATGTAGAAACAATTACAACCGGCGTAAGCACGAGGAGACGCACACAAATAGCAAATGGAAATATCAGTGTCCAAAATGTAAAAAGTATTTTAGATTGGATGATCAATACCGCAGCCATTTGGAAGATAATAAGTGCAAAGGATATGCTTCAGAAAAGCCATTTGAATGTTCCAAGTGTGAAAATGAATCATTCGTAAGCATTGAGCTTCTAAACCAACACAAAGTCAAAACCCATCCGCCcccgaaaaaaaatcacatatgCTTGATTTGCACGAAAGCATACGAGTATAAGTCCTTGCTTAGCCGCCATATGAACTCTCACACTCGTAGTCGGCCTTATAAAtgcccaatgtgtccaaaatgGTTCAACCGCTCCGACTCTTTAAGCCGGCATAAGTTAACTCACAACTTCTTAAGCGCAGATATTGAGATTCGTCGCAGATTCAAATGTACGCTCTGTGAAAAGTCTTACGGTTCAAAAATTAATCTGAATAGCCACATGTATGTGCATCGTGACGAACGTCCTTTCAAATGCGAAATATGTCCCAAGTCATATACGAGCGCAAGAACACTCAAATTACACAAAAAACTACATGCAGATGATGGGAAAAATGAATGCACCTtatgcaataaaaaatttgcATATAATAAGCAGCGACATAAGCACGAGCAGATGCACACAAATAGCCAATGGAAATATCAGTGTGCAAAATGTAAAATGTATTTTAGATTGGAGGATCAGCACCGCAGCCATTTGGAAGATAATAAGTGCAAAGGATTTGCTTCAGAAAAGCTATTTGAATGTTCTAAGTGTGAAAATGAATCATTCGTGAGCATAGAGCTCTTGCGCCAGCACAAAGTCGAAATCCATTCACCCACGAAAAGAAATCATGCATGCTCAGTTTGA
Protein Sequence: MSDLGDSSFARKKIISVKEEIEISETQLLEQVFDEVEATHANPCVKTEKQSEVVNGQYHETEDNQTELIDCEAIREQPYECILRPDDSTRSARKHDIRPSLKNHTCSICAKSFRSSSRLEVHMNVHTGSRPYACKICPRKYASRYVLREHILTHGSGLQCTLCEKTYKSRSRLKNHMKIHPSERNFQCEICSKSFTSKYRLSRHHKTHSAVKKKYECTLCSEKFADNYTRLRHEKTHTNNYSNYYECGNCKKYFRLEDQYRSHLERNKCKCYASEKPFECSKCENESFVSVELLNQHKIEVHPPPRKNHACSVCAKAFSCKSRVRRHMNIHTGSRPYACTVCPKKYSLRDKLRQHMLTHLSAEAKKRFKLKCALCEKFYSSRGRLNSHMNMHRGERPFKCETCPRTFASPGTLSSHKKLHADDGENECTLCNQKCRNNYNRRKHEETHTNSKWKYQCPKCKKYFRLDDQYRSHLEDNKCKGYASEKPFECSKCENESFVSIELLNQHKVKTHPPPKKNHICLICTKAYEYKSLLSRHMNSHTRSRPYKCPMCPKWFNRSDSLSRHKLTHNFLSADIEIRRRFKCTLCEKSYGSKINLNSHMYVHRDERPFKCEICPKSYTSARTLKLHKKLHADDGKNECTLCNKKFAYNKQRHKHEQMHTNSQWKYQCAKCKMYFRLEDQHRSHLEDNKCKGFASEKLFECSKCENESFVSIELLRQHKVEIHSPTKRNHACSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -