Npan072515.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nemotelus pantherinus
Gene Symbol
Znf784
Assembly
GCA_963978885.1
Location
OZ022266.1:65752539-65755412[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 1.7e-05 0.0045 19.5 2.3 1 23 141 163 141 163 0.98
2 26 0.00097 0.26 14.0 0.7 1 23 169 191 169 191 0.92
3 26 0.00051 0.14 14.8 1.5 2 23 205 226 204 226 0.96
4 26 4.2e-06 0.0011 21.4 0.8 1 23 232 254 232 254 0.99
5 26 0.045 12 8.7 3.8 1 23 260 282 260 282 0.98
6 26 1.8 4.8e+02 3.7 1.9 1 20 289 308 289 310 0.93
7 26 0.15 40 7.1 0.2 1 22 322 344 322 346 0.90
8 26 0.0062 1.7 11.4 1.6 1 23 353 375 353 375 0.97
9 26 1.7e-05 0.0045 19.5 0.4 1 23 381 403 381 403 0.99
10 26 0.00049 0.13 14.9 1.4 1 23 416 438 416 438 0.97
11 26 2e-05 0.0055 19.2 1.1 1 23 444 466 444 466 0.98
12 26 0.00016 0.043 16.4 6.3 1 23 472 494 472 494 0.99
13 26 0.0077 2.1 11.1 1.3 1 20 501 520 501 522 0.94
14 26 0.59 1.6e+02 5.2 0.3 1 23 534 558 534 558 0.90
15 26 0.24 64 6.4 1.3 1 23 565 587 565 587 0.95
16 26 5.5e-05 0.015 17.9 0.5 1 23 593 615 593 615 0.95
17 26 0.00014 0.038 16.6 1.6 1 23 628 650 628 650 0.97
18 26 1.6e-06 0.00042 22.7 0.9 1 23 656 678 656 678 0.99
19 26 0.12 31 7.4 3.7 1 23 684 706 684 706 0.98
20 26 1.8 4.8e+02 3.7 1.9 1 20 713 732 713 734 0.93
21 26 0.11 28 7.6 0.5 1 23 746 770 746 770 0.93
22 26 0.0011 0.28 13.8 2.4 1 23 777 799 777 799 0.95
23 26 0.0087 2.3 11.0 0.5 1 23 805 827 805 827 0.97
24 26 1.7e-05 0.0045 19.5 2.8 1 23 840 862 840 862 0.96
25 26 3e-06 0.0008 21.8 2.8 1 23 868 890 868 890 0.98
26 26 0.82 2.2e+02 4.8 7.9 1 23 932 954 932 954 0.99

Sequence Information

Coding Sequence
ATGGAGTATGAGAATGAGATGAGGGTTTTCGGTGATTTACCCTTTGCTTCTAGCAGTATCTTATCCATAAAAGAAGAAGTTGAAATTAGTGAAACACAGTTGCGAGAGCAGGTTTTCGATGCAGCCAAAGTGAAACAAAGTGATGTATACCAAAGTTTTAGTGTCGAGAAACGGAGTGAAATTATAAATGGAATACGTCACGAAGTAATTAGAGTGCCTTTCCTTTTTCGGTATATAATCCCTAAACAAATCATATTTCAGAAAGAAGATGATCAAACTGGACTTAATGATTTTCAAGTGAATACGAACACCTATAGTAAAACGATTAAGGAGCAGTCCAACGAGTGCAACTTATATCCGGAAGAGTACACCAATTCGGCTGGAACTGATGACAGGGCTAAGCCGCTCCTGAAAAATAATCATACGTGTTCGGTTTGCGCTAAATCATATAGATCGAAGTCCAAACTTGAAGTGCATATGAACTCTCATACTGGTAGTCGACCGTATGCATGCATAATGTGCCCTAAAAAGTACAGCAGTCTCGACAGCTTACGCAAGCACAAGTTGACTCACGTTTTTCTAAACGCAGAGGTGAAAAATTGTTCCAAGCTTAAATGTACGTTATGTGAAAAGTCTTACAATTCGAGAGCCCGACTGAATAGTCACATGAATTTTCATCGTGGCAAATGTCCTTTCAAATGCGAAATCTGTCCCAAGTCATTTAGGAGCGTAGAGCTACTTCTGAGACACAGTAAAACGCATTCGGATGACAGAAAATATGAGTGCACGTTATGCAATCAAAAATTTATATGCAATAGTGATTGGCGTAAGCACGAGAAAAGGCACTCAAatgaacatttgaaatttcaatgtgaAAACTGTAAAAACTATTTTAGATTGGAGGAGCAGTACCATAGCCACTTGGAATATAATAAGTGCAAAAGCTATGCTTCAGAAGGGCCATTTCAATGTGCAAAGTGTGACAATGAATCATTCGCAAGCATTGAACTTCTCAATCGGCACAAAGTCCAAGCACATCCGCCTGCCAAAAAAAATCATCCATGCTCGTTTTGTGCGGAAACATTCAGTTCAAGGTACAGGCTTGAAATGCATACGAACGTTCATACTGGCAGTCGACCGTATAGATGCACAATATGTCCAAAGCAGTTCGTCTGGCCACAAAGCTTACGCCGTCACATGTTGACCCACAATTCCTTCAGTGCAGATGCGATGACTCGTTCTAGATTTAAATGTACACTTTGTGAAAAGTCTTACGTATCAAGAGTCCGACTAAATAGTCACATGGAATTTCATCGTAGCGACCGTCGTTTCAAGTGCAAAATCTGCCCCAAATCGTTTGGAAGCGAAGATACACTCTCGTCACATAATAAAACGCATTCAGATGACGGGAAATATGAGTGCACGCTGTGCAATAAAAAATTCTCATATAATAGCCATCGGCGTAGGCACGAGAAGACGCACTCAAATGgtgatttgaattttcaatgtgAAAACTGTAAAAAGTATTTTAGATTCCAAGATCAGTACGACAGCCATTTGGAGGAAAATAAGTGCAAAGGCTATGCTTCAGAAATGCCATTTCAATGTTCAAAGTGTGTCAATGAATCATTTGCAAGCATTGAACTTCTCAATAAGCACAAAGCTCAAGTCCATCCGACTCCAATAAAAAATCATGCATGCTTAGTTTGCGcaaaaacattcatttcaagGTTCAGGCTTGATATGCATAAAAACGTTCATACTGGTAGTCGGCCGTATGCGTGCTCAGTATGTCCTAGAAAGTACAGTTCTTCCGACAGCTTACGCAAGCACAAGTTGGCTCACGATTCCCTTAGCGCAGAAGCGAATAATTATTCCAAGTTCAAATGTGTGTTATGCGAAAAGTCTTACAGTTCAAAAGCCCGACTGAATAGTCACATGAATTTTCATCGTGGCAAATGTCCTTTCAAATGCGAAATCTGCCCCAAGTCGTTTAGGAGCGAAGAACTACTTTTGAGACACAGCAAAACTCATTCGGATGACAGAAAATATGAATGCACGTTATGCAGTCAAAAATTTATATGCAATAGTGATTGGCGTAAGCACGAGAAAAGGCACTTAAATGAACACTTGAAATTTCAATGTGAAAACTGTAAAAACTATTTTCGATTGGAGGAGCAGTACCATAGCCATTTGGAATATAATAAATGTAAAGTCAGTGCTTCAGAGGCGCCATTTCAATGTGCACAGTGTGACAATGAATCATTCGCAAGCATCGACCTTCTCAATCGGCACAAAATTCATATCCATCCGCcctcgaaaaaaaatcatgcatgCTCGGTCTGTGCGAaaacattcaattcaaaatacagACTTGAAATGCATATGAACTTTCATACTGGCAGTCGGCCGTATGCATGCACAATATGTCCAAAACGGTACGGCTGGCCCTGTGGCTTACGCAAGCACATGTTGAATCACAGTCCGTTAAGGGTAGAGATGGAGAGTCGTTCCAGACATAAATGCACGCTTTGTGATGAGGCTTTTAAATCAAAAAGTCTGCTGAAAAGTCATATGGATTTTCACCGTAGCGAACGTTCTTTTAAGTGCGAAATCTGTACCAAGTCATTTAAGAACAAAGAGCTACTTTTGAAGCACAACAAAACACATTCTAATGGTAGCGGTTATGTTGGAGAGAATGAGAAATGTGGAAAACGAATTCAAACTCAAAATGAAGTCGAAACCATTCAAACCAATGAAGAATTACACAAGGAGAATGCAATGGAAAAGAAGTACAAATGTTACGAATGTAACAAGGAGTTTATCTGCAAAcgaaatttacattttcatttgaGAACACATCTACGCGTTTAG
Protein Sequence
MEYENEMRVFGDLPFASSSILSIKEEVEISETQLREQVFDAAKVKQSDVYQSFSVEKRSEIINGIRHEVIRVPFLFRYIIPKQIIFQKEDDQTGLNDFQVNTNTYSKTIKEQSNECNLYPEEYTNSAGTDDRAKPLLKNNHTCSVCAKSYRSKSKLEVHMNSHTGSRPYACIMCPKKYSSLDSLRKHKLTHVFLNAEVKNCSKLKCTLCEKSYNSRARLNSHMNFHRGKCPFKCEICPKSFRSVELLLRHSKTHSDDRKYECTLCNQKFICNSDWRKHEKRHSNEHLKFQCENCKNYFRLEEQYHSHLEYNKCKSYASEGPFQCAKCDNESFASIELLNRHKVQAHPPAKKNHPCSFCAETFSSRYRLEMHTNVHTGSRPYRCTICPKQFVWPQSLRRHMLTHNSFSADAMTRSRFKCTLCEKSYVSRVRLNSHMEFHRSDRRFKCKICPKSFGSEDTLSSHNKTHSDDGKYECTLCNKKFSYNSHRRRHEKTHSNGDLNFQCENCKKYFRFQDQYDSHLEENKCKGYASEMPFQCSKCVNESFASIELLNKHKAQVHPTPIKNHACLVCAKTFISRFRLDMHKNVHTGSRPYACSVCPRKYSSSDSLRKHKLAHDSLSAEANNYSKFKCVLCEKSYSSKARLNSHMNFHRGKCPFKCEICPKSFRSEELLLRHSKTHSDDRKYECTLCSQKFICNSDWRKHEKRHLNEHLKFQCENCKNYFRLEEQYHSHLEYNKCKVSASEAPFQCAQCDNESFASIDLLNRHKIHIHPPSKKNHACSVCAKTFNSKYRLEMHMNFHTGSRPYACTICPKRYGWPCGLRKHMLNHSPLRVEMESRSRHKCTLCDEAFKSKSLLKSHMDFHRSERSFKCEICTKSFKNKELLLKHNKTHSNGSGYVGENEKCGKRIQTQNEVETIQTNEELHKENAMEKKYKCYECNKEFICKRNLHFHLRTHLRV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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