Npan072483.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nemotelus pantherinus
Gene Symbol
-
Assembly
GCA_963978885.1
Location
OZ022266.1:65466729-65475869[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 38 8.1e-05 0.021 17.4 5.4 1 23 116 138 116 138 0.99
2 38 0.02 5.2 9.8 2.1 1 23 144 166 144 166 0.98
3 38 0.00018 0.049 16.2 1.1 1 21 174 194 174 195 0.97
4 38 0.61 1.6e+02 5.2 0.1 1 21 207 228 207 231 0.88
5 38 0.0034 0.91 12.2 0.2 1 23 238 260 238 260 0.96
6 38 6.8e-06 0.0018 20.7 0.5 1 23 266 288 266 288 0.98
7 38 0.029 7.8 9.3 2.1 1 23 301 323 301 323 0.94
8 38 3.4e-07 9e-05 24.8 1.2 1 23 329 351 329 351 0.99
9 38 0.014 3.6 10.4 1.4 1 23 357 379 357 379 0.98
10 38 0.0018 0.49 13.1 0.9 1 20 387 406 387 408 0.94
11 38 1.4 3.6e+02 4.0 0.1 2 23 421 444 420 444 0.90
12 38 0.00088 0.23 14.1 0.0 1 23 451 473 451 473 0.98
13 38 3.4e-06 0.00091 21.7 0.2 1 23 479 501 479 501 0.98
14 38 0.058 15 8.4 6.5 1 23 512 534 512 534 0.99
15 38 0.058 15 8.4 1.6 1 18 540 557 540 564 0.90
16 38 0.097 26 7.7 0.4 1 20 571 590 571 592 0.95
17 38 1.6 4.2e+02 3.8 0.3 1 21 604 625 604 628 0.88
18 38 4.1e-05 0.011 18.3 2.6 1 23 635 657 635 657 0.96
19 38 0.00014 0.036 16.6 1.3 1 23 663 685 663 685 0.96
20 38 0.00014 0.037 16.6 3.7 1 23 698 720 698 720 0.96
21 38 3.8e-07 0.0001 24.7 2.9 1 23 726 748 726 748 0.98
22 38 4.6e-05 0.012 18.1 2.6 1 23 757 779 757 779 0.99
23 38 0.49 1.3e+02 5.4 1.0 1 21 786 806 786 807 0.92
24 38 0.088 23 7.8 1.2 8 23 902 917 902 918 0.93
25 38 1e-05 0.0027 20.2 4.7 1 23 923 945 923 945 0.99
26 38 0.0076 2 11.1 0.7 1 23 951 973 951 973 0.98
27 38 0.00026 0.068 15.8 0.7 1 21 981 1001 981 1002 0.97
28 38 0.47 1.3e+02 5.5 0.3 1 23 1014 1038 1014 1038 0.92
29 38 0.00015 0.041 16.5 1.5 1 23 1045 1067 1045 1067 0.96
30 38 8.2e-06 0.0022 20.5 1.0 1 23 1073 1095 1073 1095 0.99
31 38 0.016 4.1 10.2 1.8 1 23 1114 1137 1114 1137 0.95
32 38 3.1e-07 8.3e-05 25.0 1.0 1 23 1143 1165 1143 1165 0.99
33 38 0.00015 0.041 16.5 3.1 1 23 1174 1196 1174 1196 0.99
34 38 0.65 1.7e+02 5.1 0.8 1 21 1203 1223 1203 1224 0.90
35 38 0.19 51 6.7 0.1 1 23 1236 1260 1236 1260 0.92
36 38 0.00061 0.16 14.6 2.1 1 23 1267 1289 1267 1289 0.96
37 38 1.1e-05 0.003 20.0 1.1 1 23 1295 1317 1295 1317 0.99
38 38 0.0012 0.31 13.7 3.8 1 23 1328 1350 1328 1350 0.99

Sequence Information

Coding Sequence
ATGAGTGCTTTAGAGGATCTATCTTTTGcatgcaaaaaaattatatgtataaaGGGGGAAGTTGAAATCAAGGAAACTCAATTACAAGAACAGATTTTCGATGGAGTCGAAGTGACATATGCTACCCATTGCGTTGACACCGGAAAAGAGAGTGAAATGGCAGAAGATAATCAAACCGAATTAAACGATTGTGAAGGGATTAGGGAGCAACCATACGAGTGCAACTTACGACCAGATGATTCTAACAGTTCAGTTCGAAAACATGATATTAGTCACACGATAAAGGCTTACAAATCCAGATCCGAACTGAATAAGCGCATTAAAATTCATAGCGGCGAACGTATTTTCCAGTGTAAAATCTGTTCCAAATCATTCACGAGCAAGTATGTACTCTCGTCACACCATAAAACGCATTcggataaaaagaaatatgagtGCACGTTGTGCAGTGAAAAATTCGCACATGATAGCGAGCGGCTTAGGCACGAGAAGACGCACACAAATAACTATAGAAAGTATTATGAatgtgaaaattgtaaaaagtatTTTAGAACAGAGGACCAGTATCGCAGCCATATGAAAGGTAATAAGTGCAAAGGATATGCTTCAGAAAAACCATTTGAATGTCCCAAGTGTCAAAATGAATCATTCGTAAGCATCGAGCTCCTTAACCAGCACAACATCGAAGTTCATCCGCccccgaaaaaaaaacatgcatgCTTAGTTTGTGCGAAAGCCTACAGGTATGAGGCTGAGCTTCGCCTGCATATGAACGTTCATACTGGCAAGCTGCCGTACGCATGCACAATATGTTCAAAGGCATTCAACATACCCAGTAACTTACGGCGGCACAAGTTAACTCACAACTTCTTAAGCGCAGAAAGGAAGTTTCGTCACAGATTCAAATGTATGCTCTGTGAAAAGTCTTACTACTCAAAAATCGGTCTGAATAGTCACACGTATTTTCATCGTGGCGAACGTCCTTTCAAATGCGAAATATGTCCCAAGTCGTATAGGAACCCACACACACTCAAAGCCCACATTAAAGTGCATTTTGATGAAAGAAAATATGAGTGCACGTTGTGCAGTAAAAAATTCGCAAAAGATAGCGGGCGGCTTAGGCACGAGAAGACTCATACATATgataataaaaattatcatgAATGTGAAAACTGTAAAAAGTATTTTAGATCAGCGGACCAGTATCGTAGCCATTTGGAAGGTAATAAGTGTAAAAGCTATGCTTCAGAAAAGCCACTTGAATGTCCCAAGTGTGAAAATCAATCATTCGTAAGCATCGAGCTCCTAAACCAGCACAAAATCGAAGTTCATCCACccccgaaaaaaaaatatccatgcTCAGTTTGTGCGAAAGCCTACAGGTATGGGGCTGAGCTTCGCGTGCATATGAACGTTCATACTGGCAAGCGGCCGTACGCATGCACAATTTGTTCAAAGGCATTCAGCATACCCGGTAGCTTACGCAGGCACATGTCAACTCATTTAAGCGCAGAGGCGAAGAACCGCTCCAAGTTCAAATGTACACTCTGTGAAAAGCTTTGTAGTTCAAGGAGCCAACTGAATTGTCACATGAATATGCATGGAGGCGAACGTCCTTTCAAGTGCGAAACCTGTCTCAAGACGTTTAGGAGCCCAGACAATAACAAGCGGGATAAGCACGAGAAGACGCACACAAATAGCCAATTAACATATCAGTGTGCAAAATGTAAAATGTATTTTAGATTGGAGGATCAGTACCGCAGTCATTTGGAAGGCAATAAGTGCAAAGGACATGCTTTAGAAAAGCCATTTGAATGTTCCAAGTGTGAAAATGAATCATTCATAAGCCTTGAGCTCCTTAACCTGCACAAAGTCGAATTCCATCCACCcccgaaaaaaaatcacatatgCTTGATTTGCACGAAAACATACAAGAATAAGTACTTGCTTAACATACATATGAACTCTCACTCTGGTAGTCAGCCTTATACATGCCCAATTTGTCCAAAACGGTTCGCCTGCCCCAGCAGCTTACGCCGGCACAAGTTAGATCACAACTTCTTAAGCGCAGATGGGAAGATTCGTGGCAGATTCAAATGTACGCTCTGTGAAAAGTCTTACTACTCAAAAACCAATTTGAATAGTCACATGTATTTTCATCGTGGCGAATATCCTTTCAAATGCGAAATATGTCCCAAATCGTTTACGAGTTCACATTCACTTAAAACACACATTCAAAGCCATTCGGATGAGAGAAAATATGAGAAATACGAGTGCACGttatgcaataaaaaattcacaCGCAATTCTGATCGCCGTGTGCACGAGAAAACGCATACAAATAACCGTAAGAAATATCAAtgtgaaaaatgtaaaatgtatTTTAGATTGGAGAATCAGTACGACAGCCATTTGAAAGACAATAAGTGCAAAGGATATGCTCTGGACATAAAGGAGGAAGTTGAAATCAGCGAAATGCAATTACTTGAACAGATTTTGGATGGAGTCGAAGTGACACATGTTAACCATTGTGTTAAAACAGGAAAAGAGAGTGAAGTTGTAAATGGACTATGCCATGAAACAGAAGGTAATCAAACCGAAATAAACGATTGTGAAGCGATTAGCGAGCAACTATACGAGTGCAACTTACGACCAGATGATTCCAACAGTTCAGTTCGAAAACATGATATTAGTCACATGATAAAGACCTACAAATCCAGATCCGGATTGAATAAGCACATTAAAATTCATCATGGCGAACGTAATTTCCAGTGTGAAATCTGTTCCAAATCATTCACAAGCAAGTATCTACTCTCGTCACACCATAAAACGCATTCcgataaaaagaaatatgagtGCACGTTGTGCAGTGAAAAATTCGCACAAGATAGCGAGCGGCTTAGGCACGAGAAGACGCACACAAATAACTATAGAAAGTATTATGAATGTGGAAATTGTAATAAGTATTTTAGATCAGAGGACCAGTATCGCAGCCATATGAAGGGAAATAAGTGCAAATGCAATGCTTCAGAAAAGCTATTCAAATGTTCCAAGTGTGAAAATGAATCATTCGTAAGCATCGAGCTCCTAAACCAGCACAAAATCGAAGTTCATCCACTCCCGAAAACAAATCATGCATGCTCAGTTTGTGGGAAAGCATATAGATTTAAGGGTCGGCTTCGCCAGCATATGAACCTTCATACTGGCAACCGACCGTACAAATGCACAATATGTTCAAAGACATTCAACTGGCCCGGTAGCTTACGCAGGCACATGTCAACTCACTTAAGCGCAGAGGCGAAGCACCGCTTGGTCGCACAAAAACTGAATCGGCGTAGATTCAAATGTGCGCTTTGTGAAAAGTCTTACCTCTCAAAAAAAAGTCTGAATAGTCACATGTATTATCTTCATCGTGGCGTACGTCCTTTCAAATGCGAAATATGCCCCAAATCGTTTATGAACTCAGATTCACTTAGAAACCACATTAAAAGGCATTCGGATGTGAGAAAATATGAGAAATATGAGTGCACGttatgcaataaaaaattcacaTACAAATCTGATCGCCGTGTGCACGAGAAAACGCATACAAATAACCGTAAGAAATATCAAtgtgaaaaatgtaaaatgtatTTTAGATTGGAGAATCAGTACGGCAGCCATTTGAAAGACAATAAGTGCAAAGGATATGCTCTGGATAAGCCATTTCAATGTCCCAAGTGTGAAAATGAATCATTCGTAAGCATCGAGCTCCTAAACCAGCACAAAATCGAAGCTCATCCACCcccgaaaaaaaatcatgcatgCTCAGTTTGTGGGAAAGCATATAGATTTAAGGGTCGGCTTCACGAGCATATGAACGTTCATACTGGCAACCGACCGTACAAATGCACAATTTGTTCAAAGACATTCAACTGGCCCGGTAGCTTACGCAGGCACATGACAACTCACTTAAGCGCAGAGGCGAAGAACCGCTCTAAGTTCAAATGTACACTCTGTGAAAAACTTTGTAGTTCAAGGAGGCAACTGAATAGTCACATAAATATGCATCGACACAAAGCTGAAGATGAATGCAATGGAAACTGGCAAGAGTCCGATCATATTCGAGAAAATAAGAAATGTGAAACACAAGttcaaagtgaaaacaaaaacattcaaaatgatGAGCAATCACAGAAGAATGATGCGTTCGAGAAGAAGTACAAATGTGACGAATCAACAAAACGCGTCATTACCAACTTCAAGAAAGACAGCGAGAAGAGGCACGAGCTGGCACGAGACGCGGTTAGAGAAGCTACAGCAGCAGTGGAAGAGCTGTGA
Protein Sequence
MSALEDLSFACKKIICIKGEVEIKETQLQEQIFDGVEVTYATHCVDTGKESEMAEDNQTELNDCEGIREQPYECNLRPDDSNSSVRKHDISHTIKAYKSRSELNKRIKIHSGERIFQCKICSKSFTSKYVLSSHHKTHSDKKKYECTLCSEKFAHDSERLRHEKTHTNNYRKYYECENCKKYFRTEDQYRSHMKGNKCKGYASEKPFECPKCQNESFVSIELLNQHNIEVHPPPKKKHACLVCAKAYRYEAELRLHMNVHTGKLPYACTICSKAFNIPSNLRRHKLTHNFLSAERKFRHRFKCMLCEKSYYSKIGLNSHTYFHRGERPFKCEICPKSYRNPHTLKAHIKVHFDERKYECTLCSKKFAKDSGRLRHEKTHTYDNKNYHECENCKKYFRSADQYRSHLEGNKCKSYASEKPLECPKCENQSFVSIELLNQHKIEVHPPPKKKYPCSVCAKAYRYGAELRVHMNVHTGKRPYACTICSKAFSIPGSLRRHMSTHLSAEAKNRSKFKCTLCEKLCSSRSQLNCHMNMHGGERPFKCETCLKTFRSPDNNKRDKHEKTHTNSQLTYQCAKCKMYFRLEDQYRSHLEGNKCKGHALEKPFECSKCENESFISLELLNLHKVEFHPPPKKNHICLICTKTYKNKYLLNIHMNSHSGSQPYTCPICPKRFACPSSLRRHKLDHNFLSADGKIRGRFKCTLCEKSYYSKTNLNSHMYFHRGEYPFKCEICPKSFTSSHSLKTHIQSHSDERKYEKYECTLCNKKFTRNSDRRVHEKTHTNNRKKYQCEKCKMYFRLENQYDSHLKDNKCKGYALDIKEEVEISEMQLLEQILDGVEVTHVNHCVKTGKESEVVNGLCHETEGNQTEINDCEAISEQLYECNLRPDDSNSSVRKHDISHMIKTYKSRSGLNKHIKIHHGERNFQCEICSKSFTSKYLLSSHHKTHSDKKKYECTLCSEKFAQDSERLRHEKTHTNNYRKYYECGNCNKYFRSEDQYRSHMKGNKCKCNASEKLFKCSKCENESFVSIELLNQHKIEVHPLPKTNHACSVCGKAYRFKGRLRQHMNLHTGNRPYKCTICSKTFNWPGSLRRHMSTHLSAEAKHRLVAQKLNRRRFKCALCEKSYLSKKSLNSHMYYLHRGVRPFKCEICPKSFMNSDSLRNHIKRHSDVRKYEKYECTLCNKKFTYKSDRRVHEKTHTNNRKKYQCEKCKMYFRLENQYGSHLKDNKCKGYALDKPFQCPKCENESFVSIELLNQHKIEAHPPPKKNHACSVCGKAYRFKGRLHEHMNVHTGNRPYKCTICSKTFNWPGSLRRHMTTHLSAEAKNRSKFKCTLCEKLCSSRRQLNSHINMHRHKAEDECNGNWQESDHIRENKKCETQVQSENKNIQNDEQSQKNDAFEKKYKCDESTKRVITNFKKDSEKRHELARDAVREATAAVEEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-