Npan064447.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nemotelus pantherinus
Gene Symbol
zfh1
Assembly
GCA_963978885.1
Location
OZ022265.1:89734675-89759943[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 0.00017 0.044 16.4 1.1 3 23 161 181 160 181 0.98
2 26 0.0011 0.29 13.8 0.3 1 23 185 207 185 207 0.98
3 26 7.6e-06 0.002 20.6 0.4 1 23 213 235 213 235 0.97
4 26 0.00022 0.057 16.0 5.2 1 23 241 263 241 263 0.99
5 26 4.9e-07 0.00013 24.3 0.8 1 23 269 291 269 291 0.99
6 26 1.1e-05 0.003 20.0 1.1 3 23 299 320 297 320 0.94
7 26 0.00017 0.045 16.3 2.2 1 23 332 354 332 354 0.96
8 26 0.00012 0.033 16.8 1.8 1 23 404 426 404 426 0.98
9 26 1.1e-05 0.0029 20.1 0.3 1 23 432 454 432 454 0.98
10 26 1.3e-07 3.6e-05 26.1 1.3 1 23 460 482 460 482 0.99
11 26 0.012 3.2 10.5 7.0 1 23 488 510 488 511 0.95
12 26 0.026 7 9.5 0.1 2 23 521 542 521 542 0.97
13 26 3.2e-05 0.0086 18.6 3.8 2 23 550 571 549 571 0.98
14 26 1.2e-05 0.0033 19.9 0.9 1 23 577 599 577 599 0.98
15 26 1.1e-06 0.00029 23.2 2.4 1 23 795 817 795 817 0.98
16 26 3.4e-05 0.009 18.5 0.2 2 23 824 845 823 845 0.96
17 26 0.00044 0.12 15.0 0.6 1 23 851 873 851 873 0.98
18 26 4.8e-05 0.013 18.1 3.6 1 23 879 901 879 901 0.99
19 26 0.022 5.9 9.7 0.1 1 17 907 923 907 924 0.90
20 26 0.00023 0.061 15.9 0.4 1 23 989 1011 989 1011 0.98
21 26 1.6e-06 0.00044 22.7 0.4 1 23 1017 1039 1017 1039 0.99
22 26 7.3e-05 0.019 17.5 2.0 1 23 1045 1067 1045 1067 0.99
23 26 3.1e-06 0.00084 21.8 1.5 1 23 1073 1095 1073 1096 0.96
24 26 0.0025 0.68 12.6 0.5 1 23 1104 1126 1104 1126 0.97
25 26 0.0055 1.5 11.6 1.3 2 23 1134 1155 1133 1155 0.96
26 26 6e-07 0.00016 24.0 1.0 1 23 1161 1183 1161 1183 0.98

Sequence Information

Coding Sequence
ATGAAAATCGCATTTGAATTTCGTCAAGAATGTCTTGTCTCTGCTTCATATTTCGAACAACTCCAGCCATATACAGCAGAAAAGGCTATTGACTTCATAGACATAGAGAATGCGACTCTTCTATCTGATGTCCCTATGAATGATGATGAAATGAAGCTGTTGTTCGAAGTAGGGTACAAATCAGATCAAATGCCAATAGCAGCTCAAGCAACGAAAACAATACAATCTGATGATGTTGATGCTGGAATGAATGAATCAAATAATTTATGTAAATCGAAAATGCAGGCTTATGAGGCCGTGAATTTAGAGAAAATTAATGAGTGTAATATTATCAACGACATATTTGAAACCAATATGGATTGTCCAAAGTATTTTGCAGAGAATAATGTCCAACACTCAAAGTTTCCTGCAAAGAACAATGATTTCATTAAGCTAACAACCGATTTTGAGAAGGATAAGAAAGAAAAACCCAAGCTTCTATGCTTGGATTGCAATAAAGAATTTAATAACAAATTAAGTTTAATGAAACATATCTCGACTCATCTTGCATCGCATGAGTGTCCAGTATGTGCGAAAATATTTCTAGATAGTATCGAGTTGAATAATCATATGAAAATGCACCTGAACGAACAAGTTTACATCTGCGAAATATGCAACAAAAGTTTTCCGGACAAACAGGCGCTTTGCGATCATATGGCATTGCATAAATGTAAAAGAGGATATAAGTGTGACAGTTGTGACAAATCTTATTGCTCTGAAATTGATTTAAAGAATCATATGTGCAGTCATACGGGTGAACGTCCATATAAATGCGAATATTGTGGCAGAGGATTTGTACAGAAGCTTACTCTAATCAGACACATTAGACGTCATACGGGAGAGAGACCATTGTTTTGTGATAAATGTGGCAAAAATTTTCGTCAAATGGATGCATTAAAGCGTCATATGTTGTTAAAACATTCCGATGCTTTGAATCAACTTGAAAGGACCATGCATCAGTGTAAAGTTTGCGACGAAAAGTTTTCCTCGCAAGAAAGTTTTGAAACACATGCACAGCAGCATAAACTATTCGAGGCTGTAGTAAATGAAGCCAATTCCCAGGTCGAAGCTGAAAATCAAAATCGAAACTCCCTTGGATTGAACGTTCCTGGATCACAGGACATTAATGCCCTTTCGGCCAACGTTGTTAAGGAAGTGGAAACACACGTCTATACTTGTTCGCGATGTAATACAGGTTTCAATAACCAAGTTAGCTACAATAAGCATATGCAGGAGCACGGTAATATGAAACCGTACCAGTGTGCTATATGCGGAAGTGGATTCACGCAAAATTTCTCGCTGAAACAACACATGCTCATACACACGGGCGAACGTCCTTACAAGTGCGAAATATGTGATAAGTCATTTACACAAGGGAAATCATTGACGATTCATATGAGACGGCATACCGGCGAAAGGCCATTCGAGTGCCAATATTGCGATTTAAGGTTTCACGTGAAGGATGCATTAAAGCGTCACACACACAACCATCATTCAGGTCAGCAGCCTGCTAAAGTCCGGGTGTGTGTGATTTGTCAGCAAATTTTAAATTCGAAACCGTCTTTGGACGCACACATGAAGAAACACCTGGAAGATGGGGCTGAAATGAAATGTAGAATGTGCGAGAAAGTGTTTAAAACACGATGCTTATTGGAAGAACACATGCGAACGCATACTGGAGAAAGACCTTATGTATGCGATGAATGCGGCAGTGCGTTTGCACGTAGTTCTTCATATACACGTCATAAAAAAAGACATCAAGAGAAAAAATGTGACGCAATCGAAAGCAACGATCCTTTCAACCTATGCAAACGCTGTATCTTACGTCTGAAAATCGCTTATGAATTCCGTCGTGAATGCTTGGTATCGGTATCTTATTTCGAACATCTTCGAGCATGTATCACCAAAATGAATGCCGAACTAAAGCAAGTGGTTGATTCCACCATACTCTCAAAGGTTACTGTGAACGACGATGAAATGGAGCTTTTGCTCGAAGCAGGATATAAATCTGAAGACATTGTCACAGTAATCCATGAGACTAATACAACACAACCTGATGATAATATAAAGGTGGAAGTAATTGGCGATGAAAGTTCATCGAAACCAACAAAGCAGATAACAGAAGTCATAGATAATGTTGATGATAGTGCCGCTGAAGAATACGCCGATGGTGATAATAGCCTCGAGAATTTTTTTGAGGACTTGACTCATAGTCCTGGTCCAGTCAGTAACAGCAGCAATATTGAGGAGGAAGCGGAAAATACTGAACATGAAAAAACCGAAATATGTAAGGAAGTTGACAAAAAATTGTTCGGGTCACCAACTCAGATTAGTATTGTGTCGTATCGATGCCAGACATGTGGAAAAACGTTCAGTGACCGAAACACTTTGAACAAACATCTGAGCTCGCATTCGGGGGAAGCAGTCGTAGTTTGTGATATCTGCAGTAAAACCTTCCCAGATAAAGAGTCACTAGACAAGCACATAACATCGCATCAAAGTAATCAAGCACATAAATGTGATTTATGCGACGAATCGCTTGGATCTAAAGACAAATTGATGCAACATATGCTGATTCACACCGGCGAAAGGCCTTACAAATGTGAAGTATGCGACAGAGGTTTTACACAGAGTCATTCTTTAACGTTTCATATGAGACGGCATACTGGTGAAAAACCATTTGTTTGTGATAAATGCGGTAGAAATTTTCGACAGATTGAAGCGTTGAAGcAGCTGCTTGATGATCACTCAAAATGTCATCCCAACGTGAGTAGCCAGCAAGAAATTAGTGACTCTGAAAAGGATAGTGCCAAAGATCAACAAAATGAGTCCAAAGATCAAACTGAAACACAAATGGATGCGGAAGACTCTCAAATCGAAGAAAACCCTTTAGCTGATGTCGAAAGACAAACAGAAGCGCACCTTTATACATGCTCACTATGCGATATCGGGTTCGATACACAGGCCAGCTACACGAAACATGTACAAAACCATGAGGGTGCTAAGCCGTACCGATGCGAACTATGCGGCAGCGGTTTCACACAAAACGGATCATTGAAACAACATATGCGCATTCACACCGGCGAGCGTCCTTACAAGTGTGAAGTATGCGAACGTGGATTTACACAAAGCAAGTCATTGACATTCCATATGAGGCGGCACACAGGTGAGAAACCATTCGAGTGCGAAGATTGTGATTTGAGTTTTCGCGTTAAGGATGCACTAAAACGTCACACACAAATGCATCATTCTGGGCCGCGTCCTCAAGTTCATATGTGTTCGATTTGTCAACAAGTGCTGAAATCCAAACCGGCACTGGATGCTCATATTAAAAAGCATTTGGACGATAAAAGCGCATTGAAATGCGGTGAATGTGAGAAAGTGTTTACAACGCGATATTATCATGACGAACATATTCGTGTGCATACTGGAGAAAAACCGTTTAAGTGCAATGAATGTGATAAAGAGTTTGCTCGAAGGGCATCGCTTAAACGTCACGAAAAAATTCACCAGCGGCAGaactaa
Protein Sequence
MKIAFEFRQECLVSASYFEQLQPYTAEKAIDFIDIENATLLSDVPMNDDEMKLLFEVGYKSDQMPIAAQATKTIQSDDVDAGMNESNNLCKSKMQAYEAVNLEKINECNIINDIFETNMDCPKYFAENNVQHSKFPAKNNDFIKLTTDFEKDKKEKPKLLCLDCNKEFNNKLSLMKHISTHLASHECPVCAKIFLDSIELNNHMKMHLNEQVYICEICNKSFPDKQALCDHMALHKCKRGYKCDSCDKSYCSEIDLKNHMCSHTGERPYKCEYCGRGFVQKLTLIRHIRRHTGERPLFCDKCGKNFRQMDALKRHMLLKHSDALNQLERTMHQCKVCDEKFSSQESFETHAQQHKLFEAVVNEANSQVEAENQNRNSLGLNVPGSQDINALSANVVKEVETHVYTCSRCNTGFNNQVSYNKHMQEHGNMKPYQCAICGSGFTQNFSLKQHMLIHTGERPYKCEICDKSFTQGKSLTIHMRRHTGERPFECQYCDLRFHVKDALKRHTHNHHSGQQPAKVRVCVICQQILNSKPSLDAHMKKHLEDGAEMKCRMCEKVFKTRCLLEEHMRTHTGERPYVCDECGSAFARSSSYTRHKKRHQEKKCDAIESNDPFNLCKRCILRLKIAYEFRRECLVSVSYFEHLRACITKMNAELKQVVDSTILSKVTVNDDEMELLLEAGYKSEDIVTVIHETNTTQPDDNIKVEVIGDESSSKPTKQITEVIDNVDDSAAEEYADGDNSLENFFEDLTHSPGPVSNSSNIEEEAENTEHEKTEICKEVDKKLFGSPTQISIVSYRCQTCGKTFSDRNTLNKHLSSHSGEAVVVCDICSKTFPDKESLDKHITSHQSNQAHKCDLCDESLGSKDKLMQHMLIHTGERPYKCEVCDRGFTQSHSLTFHMRRHTGEKPFVCDKCGRNFRQIEALKQLLDDHSKCHPNVSSQQEISDSEKDSAKDQQNESKDQTETQMDAEDSQIEENPLADVERQTEAHLYTCSLCDIGFDTQASYTKHVQNHEGAKPYRCELCGSGFTQNGSLKQHMRIHTGERPYKCEVCERGFTQSKSLTFHMRRHTGEKPFECEDCDLSFRVKDALKRHTQMHHSGPRPQVHMCSICQQVLKSKPALDAHIKKHLDDKSALKCGECEKVFTTRYYHDEHIRVHTGEKPFKCNECDKEFARRASLKRHEKIHQRQN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-