Basic Information

Gene Symbol
ct_1
Assembly
GCA_963978885.1
Location
OZ022263.1:178048341-178051722[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.3e-32 1.1e-27 98.0 0.0 3 77 378 453 376 455 0.96
2 2 8.9e-31 1.9e-26 94.0 0.0 3 76 579 653 577 656 0.96

Sequence Information

Coding Sequence
ATGCCACAATATGGACGACCCGACGAAGGAATGTCCGACGATCGAATCGCCCATATTCTTTCTGAAGCATCGAGTCTCATGAAGACCCCTCAAGGACACAACCCGGCCTCTCATCTTCAAGCCCAACAACAAGCCCAACAGCATCAGCATCAACAACAGGCAGCTGCGGCTCAACACTTCCAGCAGGCAGCCGCTGCGGCCGCGGCAGCAGCTGCTGTccaacaacagcaacagcaaGCTCAGCAACAACAAGCccaacagcagcagcaacaacaacaacagaaccTGCATCAGTCGTCAGCTGGCCAGGAAGACTCACACAGCAACGAAGACTCAAAATCACCACCGAATCACAGCACATCACCGTTTTACAAAGACTCGTTGCAACGGCGCTTGAAAAAATATGACAATGATGATATCTCACAAGACAAAGTTGCCAGAATCTATCAAGAAGAGTTGGCCAAGCTGATGTCTCGTGGACCTCGAGATGCTTTTCAAAGTTTTCTTTTCCCACACTTTTTCAGTGGTGGCATGCCACCAACGGTACCAGTCAATGCCAATCAACAGTCACAAATGCCCGACGACAACATTCGAATGGCACTCGAAGCATATCATCGTGAACTGGCCAAACTGCAACAAACCGGTGGAGCTTTGCCGAGCTTCCCCAACCTGCCCGGATTACTTGCCCTCCAGCAACATGCCCTCAACGGAGCTCAAGATTTGACTTGCAAAAAGGACAAAGCAATGAAAGTCAACGGTCAACAGAACTCATTTTCAATGGACTCATGCGACCAAAGCACCAAAGATTCAATAAGCGCTAGTGAAGAAGCCTTGCGACATTCCAGCGCTTTCAGTTTAGTTCGGCCTAAACAGGAACCAGGCACTCCTGCACCAGCCAACACAGCTGCAACAACACCTTCGACTGCTCCCAGCCCACTCAGTAATTCCATCCTACCACCTGCAATGACACCGAACGAAGACTTCTCTTCGTCAGCCAGTCCACTCCAGCGAATGGCATCAATCACCAACTCTCTTATCACACAACCGCCCGTCACACCTCATCACTCGCAACCTCAGCGACCGATGAAAGCCGTTCTCCCGCCAATCACTCAACAGCAATTCGATATGTTCAACAACTTGAACACCGAAGACATTGTGCGCCGAGTTAAAGAAGCCCTCTCACAGTACTCCATCAGTCAGCGACTCTTTGGAGAATCTGTTCTTGGTCTTTCACAAGGATCTGTCTCAGACCTCTTAGCACGACCAAAACCCTGGCACATGTTGACCCAGAAAGGCCGTGAGCCTTTCATTCGTATGAAAATGTTCCTGGAAGATGACAACGCTGTTCATAAGCTCGTTGCTAGCCAATATAAAATAGCTCCTGAAAAACTGATGCGAACAGGAAACTACAGTGGAAGTCCTCAAATCCCAGCAGGACTCAGTCAAAAAATGGGTCCAATGCAGAAGATGATGAACGAAGTCAAAATGCCCGATACACCTCAGCATCTGATGCAACTCCAGGCCTCAGCTATGGCCCATATCCCGACATCTCAGCATCAAGGTATGCTTCTCACACCTCCTGGTCTTCCGCCGCACCATGCCATTAGCATCTCGAATCACAACGACAAGAAGCCAATGATGATGCCATCTATTCATTCGCCACAACAAAATAACGCCATGCGAGGCATGCACCAGCACATGTCGCCCACAGTCTATGAAATGGCTGCCCTCACTCATGATCTCGATACACAAGTGATAACAACGAAAATCAAAGAGGCCCTCCTGGCCAACAATATTGGACAGAAAATCTTTGGTGAAGCTGTTCTTGGCCTCTCTCAAGGCTCAGTCTCCGAACTCCTTTCGAAACCGAAGCCATGGCATATGCTCAGTATTAAGGGTCGGGAACCTTTTATACGGATGCAGCTGTGGTTGTCTGATGCAAATAATGTTGAAAGGCTTCAGGCTCTCAAAATTGAGAGACGTGAGGCTAGTAAGCGAAGAAGATCGACCGGAGCTGGGAATCAGGATAACAGTTCGGATACAAGTAGTAATGATACTGCTGATTTTTACTCTGCAAGTCCAGGGCCAGGATCTGTCGGATCGGCAGCTGGAGTGCCCCCGAACAAGAAACAGAGGGTGTTATTCTCTGAGGAACAGAAAGAAGCACTTAGGTTGGCGTTTGCTTTGGACCCTTACCCGAATGTAGCGACAATTGAATTTCTGGCGAACGAACTTGGTTTGGCAACCAGAACGATAACCAATTGGTTCCACAACCATAGGATGCGACTGAAGCAGCAGGTTCCACATGGCGGGCCAAGCGAACCTGTTCCAAGTCGCGAGAATCAATCTAGTACACCGTTTGATCCGGTTCAGTTTAGGATTTTGCTCAACCAACGACTGATGGAGCTGCAGAAAGAACGCATGGGACTCAGTGGAGTTCCGATTCCTTACCCACCATATTTTGCAGCCAACCCCAATCTTGCTGCTCTGATTGGCAGAGGTTTGCTTCCCGGTAACGAATCAAGTCTAGCAGCTCTGAACAATGCCTTCAAGGAACAGATGAGTGGCCTAGATCTCACAATGAATGCCTTGAAACGTGAACGCAATGACGATTTTGACGATGACGGAGAGGATGAGAGCCATCTGTCTGATAATGAATCACTGGATGGATCCGATGTTAAGTCTGAGAGTTTAAAAGAAACACCCACGTCATCATCGCGTTTGTCTGGAAGTTCTTTGGTACAGTCCAGGACGTCCAGGAGGAAACCAGCAGCACCTCAATGGGTCAATCCTGATTGGCAGGATGGAACTGGTGGACCACCTCCACCTGGTCCTATCACCGAGCCAGAGGTGATCATCAATGGTGTATGTGTCATGCAAAACCAGGCTGCTGATTATAGTCGGAAGGCTAGTGGTGAGGAAACCGTCCGAATTGAACCGGCTGATGTGCAGGATAATCAACGTTCCTTCGGAGATGACGCCGAAGAAGATTGTGCGTCCGATGTGGAAGACGATGAAGGTCGAAGATCACGTTCATCGAATAAGCTTTCAGACGACGTGGCAGAAGTTGGTCAGGAGAACGATGAAAATGAAACAGGGGTGGAAGAGAAGAATGACGATGCTGAAAGTGTGGTAGAAGCGAGTAAAAATGGTGAATCGAAAGTCGAAGAAATCGACGATGATGAAGACGAGGAGGAAGAAGAAGGTGATAGTGGTTGGCATTATTGA
Protein Sequence
MPQYGRPDEGMSDDRIAHILSEASSLMKTPQGHNPASHLQAQQQAQQHQHQQQAAAAQHFQQAAAAAAAAAAVQQQQQQAQQQQAQQQQQQQQQNLHQSSAGQEDSHSNEDSKSPPNHSTSPFYKDSLQRRLKKYDNDDISQDKVARIYQEELAKLMSRGPRDAFQSFLFPHFFSGGMPPTVPVNANQQSQMPDDNIRMALEAYHRELAKLQQTGGALPSFPNLPGLLALQQHALNGAQDLTCKKDKAMKVNGQQNSFSMDSCDQSTKDSISASEEALRHSSAFSLVRPKQEPGTPAPANTAATTPSTAPSPLSNSILPPAMTPNEDFSSSASPLQRMASITNSLITQPPVTPHHSQPQRPMKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGSPQIPAGLSQKMGPMQKMMNEVKMPDTPQHLMQLQASAMAHIPTSQHQGMLLTPPGLPPHHAISISNHNDKKPMMMPSIHSPQQNNAMRGMHQHMSPTVYEMAALTHDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQALKIERREASKRRRSTGAGNQDNSSDTSSNDTADFYSASPGPGSVGSAAGVPPNKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLANELGLATRTITNWFHNHRMRLKQQVPHGGPSEPVPSRENQSSTPFDPVQFRILLNQRLMELQKERMGLSGVPIPYPPYFAANPNLAALIGRGLLPGNESSLAALNNAFKEQMSGLDLTMNALKRERNDDFDDDGEDESHLSDNESLDGSDVKSESLKETPTSSSRLSGSSLVQSRTSRRKPAAPQWVNPDWQDGTGGPPPPGPITEPEVIINGVCVMQNQAADYSRKASGEETVRIEPADVQDNQRSFGDDAEEDCASDVEDDEGRRSRSSNKLSDDVAEVGQENDENETGVEEKNDDAESVVEASKNGESKVEEIDDDEDEEEEEGDSGWHY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00322207;
90% Identity
iTF_01043507;
80% Identity
iTF_01043507;