Basic Information

Gene Symbol
Kdm5
Assembly
GCA_963978885.1
Location
OZ022267.1:3757277-3769853[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.8e-24 5.7e-20 73.7 0.0 2 89 276 359 275 359 0.94
2 2 4.3 3.7e+04 -2.6 0.0 48 65 1209 1226 1208 1237 0.80

Sequence Information

Coding Sequence
ATGgtatcgaaaattgaaaaacaatcgTTTGGCGACGTACTAATTGGGAATCCAACACAAGCTGGTCCGGTTATAAGTGGATCGTTGGGCGGTACAGGTGGCCAACAGATTACTATGACACAACCCCAAGCGGCTGTTCCGGCTACTGCCAATCGGGTAGGTGGCGGATCAGCCATCGATACGGCAATGCGGAATCGCGGCATATCCTCGTCACCGCCGCCCATTCTTACGCCCGAAGTGACAACAAATCACTGTGACGATTTCAGTAGCAGTAACATCTTGAAAGTCGAAACTGCCAAGAGTCTATGCGGTGTCGATCATTCGACCACAACAAATACAACACACCTTACAATGATGATGCCTGGTGGTGGAGGCCGACGTAGTAGCAACAGTAATTCCTCCTCCATTAATTCACTACCGCCAAATCTATGTAATTCCGGATTAAGCGGATCAAATGCATCGACTGCACTGAATGATAATAGTAACATACAAAATATTGGACCAATGAGACAACAACAATCTGGTCCACCGTCTCAACAACCCCATAAGTCCCTTCATAGTGCACCGACATCGTTTTCCAGTACGAAAAATGAAGAATTTGTATTCATACGGCCACCCGAATGTCTAGTTTTCAAGCCAAACGAGGAAGAATTCAAGAATCCGTTGGCGTATATTAGTAAAATTCGATCAGTTGCTGAGAAATATGGAATTTGCAAGATCAAGCCACCACCGTCATGGACACCACCATTTACCGTCGACGTGGATAAATTACGCTTTACGCCACGCGTTCAGCGTCTCAACGAGCTCGAAGCTAAGACACGcgtcaaattgaattttctcgATCAGATTGCGAAATTTTGGGAACTACAAGGATCATCGCTAAAAATTCCAATGGTCGAACGTAAAGCTCTCGACTTGTATACGCTGCATCGGGTCGTGCAAGAAGAAGGCGGCATGGAACAAACAACAAAAGAACGTAAATGGTCGAAAGTATCGCAACGGATGCGATATCCGGCCGGTAAAGGTGTCGGTACAATTCTTAAAGGACACTACGAACGCATCTTGCATCCTTTCGATTTGTTCACAATGGGAAAAACTTTGGCGGCTGTTAAAGCTGGTAATGCTGCCGGAGTTGGAGTAGCGCCTGGAAACGATGTCCTAACCGACACTAAAGCCAAATTGGAAGCTGAGACAGGCGATCAAGACTATAAACCGCATGGTATTGTATCCCGGCAACAAATCACACCGCCCAAAGAGACAACAGCAAGACGATCGAAACGTTTTGCCAATAGTTCGTCGGCAACGTGTGGCGTTTCCAATTATAATTTATTGCATACGGTTGGCAGTCCGTTCGGTGGGCCACTGAAAGATGAAATCAAACGGGAAACTGACGATGGAGTGGTAACAGTAACGATTCCCAGATATGGAAAAGGACGCTCCCGAAACTATGGATTTTGTACTCCGGGAGCGGGACGCACGCACAGAAAGCAAAAGGACGTCGACCCATTGGCCAAATACATTTGTCATATATGCAATCGTGGCGATATCGAAGAGGCCATGCTCCTTTGCGATGGTTGTGACGACAGCTATCACACGTTTTGCTTGATCCCGCCTTTAAGTGACATTCCGAAGGGAGACTGGCGATGCCCAAAGTGCGTTGTCGAAGAAGTGAATAAACCAGTCGAGGCTTTTGGGTTTGAACAGGCCCAGCGCGAATACACTCTGCAGCAGTTTGGCGAGATGGCTGACCAGTTCAAAGCCGACTACTTTAATATGTCGGTGCACTTGGTGCCCACGGAGCTGGTCGAACGGGAATTCTGGCGAATCGTTTCGTCCATTGATGAAGACGTTACCGTCGAATACGGGGCCGATCTACATACAATGGATCACGGGTCGGGATTTCCAACTAAAAGTTCGCTGTACTTATTGCCTGGCGACCAGGAATACGCCGAATCTAGCTGGAATCTAAATAATCTACCACTCCTCGAGGAGTCAATTCTGGGTCACATCAACGCTGATATCAGTGGCATGAAAGTCCCTTGGATGTATGTCGGGATGTGCTTTGCTACGTTCTGCTGGCACAACGAAGACCACTGGAGCTATTCGATAAACTACTTACATTGGGGCGAACCGAAAACATGGTACGGCGTACCCGGCTCAAAGGCAGAGGCCTTCGAAGCGACAATGAAACGAGCTGCTCCAGAACTATTCCAATCGCAACCAGACCTACTCCATCAGCTCGTTACGATCATGAATCCGAATATTTTAATGAATGCTGGGGTTCCTGTCTATCGTACTGACCAGCACGCGGGCGAGTTTGTGGTAACGTTTCCGCGGGCATATCATGCAGGATTCAACCAGGGATATAATTTTGCTGAAGCCGTGAACTTCGCGCCAGCCGATTGGATGAAAATGGGACGGGAGTGCATCAATCACTACTCAACTTTGCGTCGTTTTTGTGTCTTCTCGCACGATGAACTGGTCTGTAAGATGGCCCTCGAACCGGATAAATTAAATTTAGGTATAGCAACAGCATGCTATCTGGACATGGCCGAGATGGTCGACTCCGAGAAAAAGTTGAGGAAGAGTCTTCTAGAATGGGGTGTTACAAAAGCCGAACGTTCCGCTTTCGAATTGATTCCCGACGATGAACGTCAGTGCGAATCATGCAAAACTACTGTATTTCTATCAGCCGTGACCTGCTCCTGTACAAATCTTCTAGTATGCCTCAGGCACTATACCGAACTATGTACATGTCCTCCGGAAAAACACACCCTCAAATATCGTTACACACTTGACGAATTGCCGCTGATGCTTAAAAAGCTCAAAGTCAAAGCCGAGAGTTTCGAAAATTGGCTATCGAAAGTACGGGATGTACTCGACCCAAACACACCGACTACGATCACGCTTGAAGAACTCCAGGAACTGGCTCAAGAAGCTGAGGACAAAAAGTTCCCCAGTTCGATATTATTGGAGCGGTTGAATGCAGCCGTCCTTGAAGCAGAGAAATGTGTAACAGTTATTCAGCAGCTCGACATTAATAAAATGCGTACGCGCACAAGAAACGCCAATGATGCGGCCAAGTACAAATTGACATTGGACGAACTAGAGATGTTTGTTCAGGAAATTGATAATTTGTGTTGTATTATTCAGGAAGGGCAAAGTGTTCGGGAGTTGCAGGCACTTGGCAAGGAATTTCTCGAGAATGCCAAGCAACTACTACATCAGTCGCTGAGAAAAGCCGACGAGCAAGCTATCGAGAAACTAATCGAAGAGGGCTCGACACTATGCATTGAACTCCCTGAAATCAAAGCTCTGAAAGACCGTTTGTTGCAAGTGGTCTGGTACAATCGTATTCGAGAATTCCGTGATACACAGGAAAAAATACCTGTCGCTGAGATTCATAATTTTCTCAAGGAAGGTTTAAGCATTACACCGGACTCGACAATCGAGAAAGAACTCTACGAGCTGCAGGAGATTCTGATGAGTGTTGAAGATTTGGAGATTGTGGCGAAACGTTTTCTAGAAGGTGAGTCATCCTGTGATCTTTCGGAGATCGAGCTGTTGCTTGAACGCGCTGAAGAGTTAGAGGGTGAATTACCTTCGAGACAGGCATTAAAGGATGCTGTGAAGAAAGCCAAGGAATGGCTGCAGATTGTCGAAGTATTACAGTCAAATGAAAGCTATCCGTATTTCCATACGCTTGAGAATCTAGTGAATCGCGGAAAGAATATCCCGTTCCAGCTCGAGGAGCTGAAGCGAATGGAGGAGCATTTGGATAGTGCTCGTGCATGGAAGGAGCGAACAGCGCGTACCTTCTTAAAAGAATGCACGACGTTTTCCTTGCTGGATGTACTCTCGCCCCGTTCCGATGCTGTTATGTACGGCTCGAAGGTGAAGAAGAAGTCAATGGAGGAACAATTCACGGAGGAAATGAGCCTTGTGCAAATGGTAAATACGTTTAAAAATGCCGAAGAAAAGGAAATCGTCGATATGAAATCGATGCGAAAGCAGAATATGGAAAAGAATCCGCTCGAAGACAAATTCTGTAAGTGCAAGCGAAAGTTCCAAGGTATCATGTACCAGTGTCAGCTTTGTCGTGATTGGTTCCACGACACTTGTGTTCCTCCACCGAAAAATACAGTACGTCCGCGACCAAACAATTCGTCATGTCAGATGAACACTCTCAATGTTCCGCAGCTGACGGCACGCGAGCGTGACCGCGAACCCAAATACTTGTGTCAATCATGTATGCGATCTCGACGGCCACGCCTCGAGACTATTCTATCTCTATTGGTGTCGCTGCAAAGGCTTCCTATTCGGCTACCGGAAGGTGAAGCTTTGCAATGTCTTACGGAAAGGGCCATGAATTGGCAGGATAGAGTTCGACAAGCGTTCGCCACCGAAGACGTTGTGTCGGCATTGGCACTGCTATCAAATATCTCGCAGAAGAACTCGTCGGGTAGTGGTGCGGGCTCCGGGCTCGAAAAAGACTCTAAAATAGACAGTGGTAGGACTAACAAACGCAGATCTCAACAGGTATTGACTAGACTACGTGCGCCGGCTGCTAGTGCAGTGAGCGACGATGAAATTGATTCGAGCTCCGATGATGAGTCGATGATAAATTCGAGGGGTATTCTAAATCAGTCGTCGATGGGAGTGACGAGCAGCGGTGGTAATAGTTCCCCATCATCACCAAGTATTAACTTGTTTAGTAAAATCGAGCATGCCTACTCGGTTCCGGTCCCACCGAATGTATCAAGCTCGCCAGGTAGTGGTAGTGGTAAATCAGCGGGTGGGCAAAGTGATAATCGCTCGTCGTTGTCGAAGAGCGAAATGCCTCTTATTAATCTATCGAAAACGACTACAGAAATTCTCGAAACACTTATGATGGAAGGTGATCTGATGGAAGTATCACTCGACGAAACTTTGCATATTTGGCGAATAATGAATGCAGCTAAACCTTCCACTTCCGATTTAGCGTATATACAACATAAATATAAGACAGCATCGATTCCCACAAACGATAACCTAGTCACAagcagcaacaaaaaaaaacgtcgCTCTGATGATGCAACACCGCAAGCTACGAAACGTACGAGTAAAGCTCAAACATCGCTGACTTCGCCAACTAGTACACCAGCAGCCAGTCAGATTGCTAACAATGCAGCGGCAGCTACAGCTCAGCAAAACAACACGGGGCCGGGCACAAAAGTGAAACGCGGTCGAAAGATGAAAGTAGTACGGAAGGATACAGATTCGCCGGCAAGTTCCGGTAATAATGGTGGTGGATCGGGACCGCCAGAACCGAAAAAACGTAAGCGTGGCAAGAAAGCTTTGGCGGCTCGTCAAGAGCAAGTTGCAGCCACGGTTGCAGCGGCATCTACTTCGGATGACGACGAAGAATGCAGTGCTACGAGTTGCGCCCGTCCCACTGGTCGAGAAGTCGATTGGGTTCAATGTGATGGTGGCTGCAACCAATGGTTCCACATGTATTGTGTAGGACTTGACAAGGATCAAATCAAACCCGACGATGATTTTATTTGTAAGCGATGTAAAAAGAATCAACCTGAAACAGCAGCAGTAACCTCAACAATTGATACAAATCCTGCAACTGTAGCAACAACGGCTGCTGTTCCAACAACTGCTACAACAATAACACCAACACCTCAAGGACAAGCTGCTGATATTGATGCTGCTACAGAGGATTGCAACAAAGAAGGAAGCGCTGTCTCGCCGGTCGGTAATAGTATTGGTAACAGCACGGGTGGGAATAGTAGTGCTGGCGGAGGAGGCGGTGGTGTAGGGAAAGGTGGTCGACAAAAATCCGCCGccaatatttcaaattcctcCCCTTCGAATACAATTAaatatcataataataataataatagcagTAGTAGTAATAACAGTACAATTCAAAGTAGTAGTATTTGTTCTAGTAGtagtaataaaaatgaaaatattagtaACCATCCCGATTGTGATCAACCTACATCAACAAAAATAGGCCGGAACACCGAAGAAGAACATACTACGGAGAAGTACGAGGACAATAGGGGGTCAAAAGATACGTTACTATTAACAACatcgccatcatcatcatctccTTCATTCATCACCACCacatcatcaacaacaacaacagttgGGGCTGCGACGACGATACAAAAAGCAACAACATCTTCAGAAAAGTCTATTAAATCCGAGTCGGAGAGCACGAAAACAATATCATCGTCCTCTGATccttcaacaacaacaacaacgttCAATTCGAGTAAAAGTAACAATACTGCCACCGCCGAAACAGCTAattcagcaacaacaaaaacacctcCCTCAAGCACTCAAACAACAGAAACTGCAAGCTAA
Protein Sequence
MVSKIEKQSFGDVLIGNPTQAGPVISGSLGGTGGQQITMTQPQAAVPATANRVGGGSAIDTAMRNRGISSSPPPILTPEVTTNHCDDFSSSNILKVETAKSLCGVDHSTTTNTTHLTMMMPGGGGRRSSNSNSSSINSLPPNLCNSGLSGSNASTALNDNSNIQNIGPMRQQQSGPPSQQPHKSLHSAPTSFSSTKNEEFVFIRPPECLVFKPNEEEFKNPLAYISKIRSVAEKYGICKIKPPPSWTPPFTVDVDKLRFTPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRVVQEEGGMEQTTKERKWSKVSQRMRYPAGKGVGTILKGHYERILHPFDLFTMGKTLAAVKAGNAAGVGVAPGNDVLTDTKAKLEAETGDQDYKPHGIVSRQQITPPKETTARRSKRFANSSSATCGVSNYNLLHTVGSPFGGPLKDEIKRETDDGVVTVTIPRYGKGRSRNYGFCTPGAGRTHRKQKDVDPLAKYICHICNRGDIEEAMLLCDGCDDSYHTFCLIPPLSDIPKGDWRCPKCVVEEVNKPVEAFGFEQAQREYTLQQFGEMADQFKADYFNMSVHLVPTELVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEESILGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSKAEAFEATMKRAAPELFQSQPDLLHQLVTIMNPNILMNAGVPVYRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWMKMGRECINHYSTLRRFCVFSHDELVCKMALEPDKLNLGIATACYLDMAEMVDSEKKLRKSLLEWGVTKAERSAFELIPDDERQCESCKTTVFLSAVTCSCTNLLVCLRHYTELCTCPPEKHTLKYRYTLDELPLMLKKLKVKAESFENWLSKVRDVLDPNTPTTITLEELQELAQEAEDKKFPSSILLERLNAAVLEAEKCVTVIQQLDINKMRTRTRNANDAAKYKLTLDELEMFVQEIDNLCCIIQEGQSVRELQALGKEFLENAKQLLHQSLRKADEQAIEKLIEEGSTLCIELPEIKALKDRLLQVVWYNRIREFRDTQEKIPVAEIHNFLKEGLSITPDSTIEKELYELQEILMSVEDLEIVAKRFLEGESSCDLSEIELLLERAEELEGELPSRQALKDAVKKAKEWLQIVEVLQSNESYPYFHTLENLVNRGKNIPFQLEELKRMEEHLDSARAWKERTARTFLKECTTFSLLDVLSPRSDAVMYGSKVKKKSMEEQFTEEMSLVQMVNTFKNAEEKEIVDMKSMRKQNMEKNPLEDKFCKCKRKFQGIMYQCQLCRDWFHDTCVPPPKNTVRPRPNNSSCQMNTLNVPQLTARERDREPKYLCQSCMRSRRPRLETILSLLVSLQRLPIRLPEGEALQCLTERAMNWQDRVRQAFATEDVVSALALLSNISQKNSSGSGAGSGLEKDSKIDSGRTNKRRSQQVLTRLRAPAASAVSDDEIDSSSDDESMINSRGILNQSSMGVTSSGGNSSPSSPSINLFSKIEHAYSVPVPPNVSSSPGSGSGKSAGGQSDNRSSLSKSEMPLINLSKTTTEILETLMMEGDLMEVSLDETLHIWRIMNAAKPSTSDLAYIQHKYKTASIPTNDNLVTSSNKKKRRSDDATPQATKRTSKAQTSLTSPTSTPAASQIANNAAAATAQQNNTGPGTKVKRGRKMKVVRKDTDSPASSGNNGGGSGPPEPKKRKRGKKALAARQEQVAATVAAASTSDDDEECSATSCARPTGREVDWVQCDGGCNQWFHMYCVGLDKDQIKPDDDFICKRCKKNQPETAAVTSTIDTNPATVATTAAVPTTATTITPTPQGQAADIDAATEDCNKEGSAVSPVGNSIGNSTGGNSSAGGGGGGVGKGGRQKSAANISNSSPSNTIKYHNNNNNSSSSNNSTIQSSSICSSSSNKNENISNHPDCDQPTSTKIGRNTEEEHTTEKYEDNRGSKDTLLLTTSPSSSSPSFITTTSSTTTTVGAATTIQKATTSSEKSIKSESESTKTISSSSDPSTTTTTFNSSKSNNTATAETANSATTKTPPSSTQTTETAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-