Basic Information

Insect: Nematopogon swammerdamellus
Gene Symbol: ken
Assembly: GCA_946902865.1
Location: CAMPPV010001624.1:217268-235587[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.017 1.3 10.5 1.2 1 23 38 61 38 61 0.94

2 13 5.8e-05 0.0044 18.3 0.6 1 23 67 90 67 90 0.97

3 13 1.6 1.2e+02 4.3 3.9 3 23 101 125 100 125 0.78

4 13 1.6 1.2e+02 4.3 3.9 3 23 136 160 135 160 0.78

5 13 1.6 1.2e+02 4.3 3.9 3 23 171 195 170 195 0.78

6 13 1.6 1.2e+02 4.3 3.9 3 23 206 230 205 230 0.78

7 13 1.6 1.2e+02 4.3 3.9 3 23 241 265 240 265 0.78

8 13 1.6 1.2e+02 4.3 3.9 3 23 276 300 275 300 0.78

9 13 1.6 1.2e+02 4.3 3.9 3 23 311 335 310 335 0.78

10 13 0.015 1.1 10.7 4.4 3 23 346 366 345 366 0.98

11 13 0.0013 0.097 14.1 1.0 1 23 372 395 372 395 0.97

12 13 0.0013 0.097 14.1 1.0 1 23 424 447 424 447 0.97

13 13 0.11 8.2 8.0 0.3 6 23 481 499 479 499 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.017	1.3	10.5	1.2	1	23	38	61	38	61	0.94
2	13	5.8e-05	0.0044	18.3	0.6	1	23	67	90	67	90	0.97
3	13	1.6	1.2e+02	4.3	3.9	3	23	101	125	100	125	0.78
4	13	1.6	1.2e+02	4.3	3.9	3	23	136	160	135	160	0.78
5	13	1.6	1.2e+02	4.3	3.9	3	23	171	195	170	195	0.78
6	13	1.6	1.2e+02	4.3	3.9	3	23	206	230	205	230	0.78
7	13	1.6	1.2e+02	4.3	3.9	3	23	241	265	240	265	0.78
8	13	1.6	1.2e+02	4.3	3.9	3	23	276	300	275	300	0.78
9	13	1.6	1.2e+02	4.3	3.9	3	23	311	335	310	335	0.78
10	13	0.015	1.1	10.7	4.4	3	23	346	366	345	366	0.98
11	13	0.0013	0.097	14.1	1.0	1	23	372	395	372	395	0.97
12	13	0.0013	0.097	14.1	1.0	1	23	424	447	424	447	0.97
13	13	0.11	8.2	8.0	0.3	6	23	481	499	479	499	0.92

Sequence Information

Coding Sequence: ATGTTCAAACGCAGAACAGCTATTGTTTGTCGCTTGTACTTCAAGAACCACCTCTCGTACAATTCCCACCTCAAGAACAATCTGAAGCATGTCAGCCCGGACAGCCTCAAATTCACGTGCAGCATCTGCCAGAAGAAGTTCCTCACGCAGCGGAGGCTGAGCACTCACGTCGGCACAATACACCTCAAGCAGACCCAGTACATGTGCCCCAAGTGCTCCAAGGCGTGCGGCAGTAAGGGCAACCTGGACAAGCACGTGCGGATAGTGCACGAGCGGCCGCCGCGGCCGCGCGACAAGATCTGCCACACCTGCGGCAAGGGTTTCTACGCGTGCGGCAGTAAGGGCAACCTGGACAAGCACGTGCGGATAGTGCACGAGCGGCCGCCGCGGCCGCGCGACAAGATCTGCCACACCTGCGGCAAGGGTTTCTACGCGTGCGGCAGTAAGGGCAACCTGGACAAGCACGTGCGGATAGTGCACGAGCGGCCGCCGCGGCCGCGCGACAAGATCTGCCACACCTGTGGCAAGGGTTTCTACGCGTGCGGCAGTAAGGGCAACCTGGACAAGCACGTGCGGATAGTGCACGAGCGGCCGCCGCGGCCGCGCGACAAGATCTGCCACACCTGTGGCAAGGGTTTCTACGCGTGCGGCAGTAAGGGCAACCTGGACAAGCACGTGCGGATAGTGCACGAGCGGCCGCCGCGGCCGCGCGACAAGATCTGCCACACCTGCGGCAAGGGTTTCTACGCGTGCGGCAGTAAGGGCAACCTGGACAAGCACGTGCGGATAGTGCACGAGCGGCCGCCGCGGCCGCGCGACAAGATCTGCCACACCTGCGGCAAGGGTTTCTACGCGTGCGGCAGTAAGGGCAACCTGGACAAGCACGTGCGGATAGTGCACGAGCGGCCGCCGCGGCCGCGCGACAAGATCTGCCACACCTGCGGCAAGGGTTTCTACGCGTGCGGCAGTAAGGGCAACCTGGACAAGCACGTGCGGATAGTGCACGAGCGGCCGCCGCGGCCGCGCGACAAGATCTGCCACACCTGCGGCAAGGGTTTCTACTGCAACCAAACGCTAGTGACGCACCTGCGCACGCACACCGGCGAGAGACCGTACCGCTGCCGGCTATGCGTGGCCACATTCACCCAGTCGAGCGCCCTGTACAACCACAGCAAGCGTGTGCACTTGCACCGAGCCGCGCGCCCACCGGTGTCCGCCGCAGACGCACCCGCCGCGCCCGAGTACGCCCACACTGCTGAGAAGACGCCGTACCGCTGCCGGCTATGCGTGGCCACATTCACCCAATCGAGCGCCCTGTACAACCACAGCAAGCGTGTGCACTTGCACCGAGCTACGCGCCCACCGGTGGCCACCGCAGACGCACCCGCCGCGCCCGAGTACGTCCACACTACTGAGAAGACGCCGTACCGCTACCGGCTATGCGTGGCCACATTCACCCAATCGAGCGACCTGTACAACCACAGCAAGCGTGTGCACTTGCACCGAGCTACGCGCCCACCGGTGCCCACCGCAGACGCACCCGCCGCGCCCGAGTACGTCCACACTGCTGAGAAGACGTAA
Protein Sequence: MFKRRTAIVCRLYFKNHLSYNSHLKNNLKHVSPDSLKFTCSICQKKFLTQRRLSTHVGTIHLKQTQYMCPKCSKACGSKGNLDKHVRIVHERPPRPRDKICHTCGKGFYACGSKGNLDKHVRIVHERPPRPRDKICHTCGKGFYACGSKGNLDKHVRIVHERPPRPRDKICHTCGKGFYACGSKGNLDKHVRIVHERPPRPRDKICHTCGKGFYACGSKGNLDKHVRIVHERPPRPRDKICHTCGKGFYACGSKGNLDKHVRIVHERPPRPRDKICHTCGKGFYACGSKGNLDKHVRIVHERPPRPRDKICHTCGKGFYACGSKGNLDKHVRIVHERPPRPRDKICHTCGKGFYCNQTLVTHLRTHTGERPYRCRLCVATFTQSSALYNHSKRVHLHRAARPPVSAADAPAAPEYAHTAEKTPYRCRLCVATFTQSSALYNHSKRVHLHRATRPPVATADAPAAPEYVHTTEKTPYRYRLCVATFTQSSDLYNHSKRVHLHRATRPPVPTADAPAAPEYVHTAEKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -