Basic Information

Insect: Nematopogon swammerdamellus
Gene Symbol: zfh1
Assembly: GCA_946902865.1
Location: CAMPPV010000020.1:992809-1007067[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0012 0.095 14.1 0.1 1 23 74 96 74 96 0.95

2 8 2.7e-05 0.0021 19.3 2.5 1 23 106 128 106 128 0.97

3 8 2.3e-06 0.00018 22.7 6.2 1 23 137 159 137 159 0.99

4 8 0.0011 0.086 14.2 0.9 3 21 167 185 165 186 0.94

5 8 0.0076 0.58 11.6 0.3 2 21 448 467 447 468 0.92

6 8 1.8e-05 0.0013 19.9 1.1 1 23 773 795 773 795 0.95

7 8 0.0001 0.0077 17.5 8.4 1 23 801 823 801 823 0.98

8 8 0.087 6.6 8.3 7.1 1 21 829 849 829 850 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0012	0.095	14.1	0.1	1	23	74	96	74	96	0.95
2	8	2.7e-05	0.0021	19.3	2.5	1	23	106	128	106	128	0.97
3	8	2.3e-06	0.00018	22.7	6.2	1	23	137	159	137	159	0.99
4	8	0.0011	0.086	14.2	0.9	3	21	167	185	165	186	0.94
5	8	0.0076	0.58	11.6	0.3	2	21	448	467	447	468	0.92
6	8	1.8e-05	0.0013	19.9	1.1	1	23	773	795	773	795	0.95
7	8	0.0001	0.0077	17.5	8.4	1	23	801	823	801	823	0.98
8	8	0.087	6.6	8.3	7.1	1	21	829	849	829	850	0.96

Sequence Information

Coding Sequence: ATGAAAGTGCAAGGGCATATGGGAGTAGACAGTTGGCTGGGTCGTTATGCGGCCGGTTGGCTTCTAGACATGCGGAGTAAGCAAGTCCCTACTTCCACCACTTCCGCCCGGCTGGCGGCCTTGTTTCGGCCGCTCACGGCCGGAGCGGGCGTCGATGTGAAGGGTGCGGACTCGGAGGACGAGCCGCGCGGGTCGCCGCCGCTCGGCCCCGGTGGGCCCTTCACCTGCTCGCAGTGCGGCGGCGCCTACCCCACGCAGGAACAGCTCGAGAAGCACGAGACCCTACACTCGCCTAACACGCAGGTGAGCTCCAACCATTCGTGCAAAATATGCCAAAAAAGCTTCGCCAATGTCTACCGATTGCAGCGCCACATGATAAGCCACGACGAGAGCGCACTGCTGCGGAAGTTCAAATGTAATGACTGCGATAAAGCGTTTAAGTTCAAGCACCACCTGAAGGAGCACCTCCGGATACACAGCGGGGAGAAACCCTTCGGCTGCGGAAACTGCGGCAAAAAGTTCTCACATTCCGGCTCCTACTCCAGCCACATGACTTCCAAGAAATGCTTAGTCATGAACTTGAAGATGGGGCGCATCAAACCCAACAACCCAGCACTCAACCCCGATCGAAGTCCGTCCCGAAAGCGTCCATCGGCCGCATTGGTCGCATCGCAGATCAACAACAACCTCGCACCGAACGGAAACGCCTTTATGCCGATCTCTAAATACAACGAAGCAGCCGCGGCATTCTTGGCTTCCATGTCGCCGCAGGACGGCAATTTCCATCCGCAGGCTCTCGCGCCGCACGGCGTACAACCTTTTTACATTCCACCAGGCATGCCGTTGAGTCCAGCCAACGGCATCGCGCCGTACAGCTTGCCGGCATTAAGTCAATTCTTCCACATAGCTTCTACGCAATATCAACAGAGAAAGTACGAATCGCAAATGGGAGCCAGAGATAACACTGCCTCTCCAGATCCAGAAGATATGATAGAAGAAGTTACCGAAGACGACGACAAAAGGTCATCTGTGAGCAGCGCTCACGAACTAGTGATGGACATAGAAGACGACGAAGCCGTATTCATCAAGAAGGAAAGAGAAGAGAACGTTGAGCCACGGTCTCCGGAGCCCGCGTATGCGCCGATACCGCCTAGAAAAAGCTCACCAGCACGGGAAAATCACATCGGAATAATATTAGACTCCGTTAATGCTTCGGCTACGAAACATATTCTCCAAGGGCACATGCAAAAGCTTTCTCCAGTTTCTGCTACGATGTGTCCTAGCGTAGAGTCTCCGCCTGCTCAACAAGTGGCTGTCAAACCTGATCCTGAGCAAGTTCTCAACTGCTCCACGTGCAATGCTGTGTTTAATCACAAAACCGAATTAATTCAGCACGAAAAGGTGTTGTGCGGTAACATTTTCCGCAAGCACGAAGGTTTAGCTGCCCAGGTTGCTGAAACTTTAGCTCTCAACAGAATCGAATCCGAAATGAGAGCCATTCAGAGCGGCGTCAGCGCGAGCGAGGACGAAGATTATATAAAAGAAGAAAGGGAAGATAAAATGTCGCTTCAAGAATCTGACAGAAAAATAAGAGTACGAACCGCTATTAGCGAAGAACAACAAGCGATTCTGAAAGAGCACTATGCGGTCAATCAGCGACCAAATCGTGAAGAATTCAAAAGAATCGCCCAACAACTCGGGCTCGATAACAGAGTGGTTCAAGTGTGGTTTCAAAACAACCGAGCTCGAGTTCGCCGAATGAATCAAAGCCTAGCATTCTCCGAGCAACCTCTCGATTTATCTACTAAGAAGTCCACGCCTTCTATAGCGTCGTCGCCGTCGCCGTCTCCACCCTGCAGCGTGTCGGTCACGCATTCCGATTCCGGAGAAGAAGCAGTCAATCTGAGCCAAAAGTCTTCTCGCAGCACCACTCCCTATCGCAACAATTATCCGACTGCTTATCCACATTCCAACTGTTCGTCGTCGTCTTTCGCAGACTTTCGACATTCGCCATCGCCGGGTGAGATGATAAACGGCCACAAGCGCATGATGCAACAGAAAGCTGCTATGAACGGTCTACACATGCTGCCAGTTGACAAGTTTCTTCATTATGACTTGGCAGCCTCCAGGTCACCTCTTCTAAACGGGCATTTCCCCCAAGACATAAACCGTCATAATCCCAGTCCTATACGATACGAAAAGCGACCGTGGAGCGAGGACCCTTCTTTGCCTAAAGACGCAGAGTTGGAAGAACGTTTATCGTTCAAAAAGAAGAGAGCTAAGCAAGGCGGAGAAATGAAAGAGGTCGAGGGACAATATGTCTGCGATCTGTGCGACAAAACTTTCATCAAACAGAGTTCCTTGCTCAGGCACAAATACGAACACTCAGGCCAGAGACCGTACAAGTGTATGGAATGCGACAAGGCATTCAAGCACAAGCACCATCTGACAGAACACAAGCGCTTGCACACTGGAGAAAAGCCCTTTCAATGCTGCAAATGTCTCAAGAAGTTCTCTCACTCCGGCTCCTACAGCCAGCACATGAACCACAGGTATTCCTACTGCAAGCCTTATAGAGAATAG
Protein Sequence: MKVQGHMGVDSWLGRYAAGWLLDMRSKQVPTSTTSARLAALFRPLTAGAGVDVKGADSEDEPRGSPPLGPGGPFTCSQCGGAYPTQEQLEKHETLHSPNTQVSSNHSCKICQKSFANVYRLQRHMISHDESALLRKFKCNDCDKAFKFKHHLKEHLRIHSGEKPFGCGNCGKKFSHSGSYSSHMTSKKCLVMNLKMGRIKPNNPALNPDRSPSRKRPSAALVASQINNNLAPNGNAFMPISKYNEAAAAFLASMSPQDGNFHPQALAPHGVQPFYIPPGMPLSPANGIAPYSLPALSQFFHIASTQYQQRKYESQMGARDNTASPDPEDMIEEVTEDDDKRSSVSSAHELVMDIEDDEAVFIKKEREENVEPRSPEPAYAPIPPRKSSPARENHIGIILDSVNASATKHILQGHMQKLSPVSATMCPSVESPPAQQVAVKPDPEQVLNCSTCNAVFNHKTELIQHEKVLCGNIFRKHEGLAAQVAETLALNRIESEMRAIQSGVSASEDEDYIKEEREDKMSLQESDRKIRVRTAISEEQQAILKEHYAVNQRPNREEFKRIAQQLGLDNRVVQVWFQNNRARVRRMNQSLAFSEQPLDLSTKKSTPSIASSPSPSPPCSVSVTHSDSGEEAVNLSQKSSRSTTPYRNNYPTAYPHSNCSSSSFADFRHSPSPGEMINGHKRMMQQKAAMNGLHMLPVDKFLHYDLAASRSPLLNGHFPQDINRHNPSPIRYEKRPWSEDPSLPKDAELEERLSFKKKRAKQGGEMKEVEGQYVCDLCDKTFIKQSSLLRHKYEHSGQRPYKCMECDKAFKHKHHLTEHKRLHTGEKPFQCCKCLKKFSHSGSYSQHMNHRYSYCKPYRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01042589;
90% Identity: iTF_01042589;
80% Identity: iTF_01042589;