Basic Information

Gene Symbol
znf16l
Assembly
GCA_946902865.1
Location
CAMPPV010000808.1:346125-373711[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 8.3e-06 0.00063 20.9 0.7 2 23 1913 1934 1912 1934 0.97
2 12 8e-06 0.0006 21.0 1.4 1 23 1940 1962 1940 1962 0.97
3 12 0.026 1.9 10.0 0.7 1 23 1968 1990 1968 1990 0.98
4 12 0.00013 0.01 17.2 1.0 1 23 1996 2018 1996 2018 0.96
5 12 4.6e-05 0.0035 18.6 0.1 1 23 2024 2045 2024 2045 0.98
6 12 6.5e-05 0.0049 18.1 0.8 1 23 2051 2073 2051 2073 0.98
7 12 0.0037 0.28 12.6 5.8 1 23 2079 2102 2079 2102 0.98
8 12 0.002 0.16 13.4 6.1 1 23 2130 2153 2130 2153 0.98
9 12 0.0037 0.28 12.6 5.8 1 23 2181 2204 2181 2204 0.98
10 12 0.0037 0.28 12.6 5.8 1 23 2232 2255 2232 2255 0.98
11 12 0.0037 0.28 12.6 5.8 1 23 2283 2306 2283 2306 0.98
12 12 0.0074 0.56 11.7 6.3 1 23 2334 2357 2334 2357 0.98

Sequence Information

Coding Sequence
ATGCCCATCACCCGGTCCACGAAGAACGCGAGGCAGCGGGCGACCGAGTCCCTGCGTGACGAGGCACGTGTGCCACCGAACGACGGATCTACACCTACGTCGTCGGAGCCCGTCACGTCGCCGCCCACTGCCGGAACAACGAGCCGCGAAACGGAGACCGAATGGTCTCACGAGCGACAGTCGGAGGACGAGGCCCCTCCGAAGCACTCAGCGGGCGGTCGTCCCACAGTCGCGACCGCCGGGCCTGAGTGCGTGCCAGAGCAAAGTGCGCCGCTACCTACCGCGCATCATGACGTCACGCGCCGCGACGACGTCGGAGCGGGAGTGTTCGGACATAGTGCAGTGCCCACCGCGCATCATGACGTCACGCGCCGCGACGACGTCGGAGCGCGTGAGTTCGGACCAAGTGCAGTGCCTGCCGCGTATAGTGACGTCAGCGCGCGAGTGTCCGGACCGAGTGTAGTGCCCACCGCGCAGCATGACGTCACGCGTCGCGATGACGTCAGCGCGCAAGTGTTTGGACAAAGTGTAGTGCCGCCTACCGCGCATGCCGGCGTCACGCACCGCGACGACGCCGGCGCGCCAGTGCAAAGACTAAGTGAAGTGCCGCGCGCCGCCCCACCGCGCTCGCGGGCCTCCACCGGACGCGGAGCTGGATCCGTCCGGTCGGCGAGGTCCTCGAAGCTGGTAGCGGAGCTCGCCCTACAAGAGGAGCTCACGCAGCTAGCGCTCGAGGAGGCACAAGCGCGCACAAAAACATTGAAGGCCATCGCGCAACAGGAGCAGGAGGAGGCGCAAGCACGCACGACAGCGCTGAAAGCGAGACTCGAGCGGCTGCAAGCCGAGCAGCTCGAGCGTGCGTCAACGAGCGACGAGGAGGGTGACGACGAGTTGCAGCGGGGCCGCCTTGAAGATTGGATCCAAGGGCACACCCAACACCGGCGGGAGCGAGAGCCACAGCTCGTCCCGCCGACCGAGCGCGAGCGCGCCACCCTTGGACTCCGATCAGAAGCGGTCACCGCGGAGCACCCCCCCAACACCGCCACAGAAGTCAACCTGCACGACGCCGCCGCCGCTGTATGGCGGCAAGACGCACCGCCGCCCGCCTCCGCCGTCGCGGGCACGCGCGCTGCGCTGCCGCCCGCCGCTGCTGCATGGCTGCACGACGCACCGCCGGCCGCCGCCGCGGCCGCGGGCACGCGCGCTGCGCTGCCGCCCGCCGCTGCTGCGTGGCTGTACGCCGCGGCACAGGCTGCGGCCGCCGCCAACACCGCGGAGCCGCACGCCGCGCCGCCGACCGCCGCTGCTGCGTGGCCGTACGCCGCGCCCCAGGCTGCGGCCGCCGCCGATACCGCGGGGCCGCACGCCGCGCCACCGCCCGCCGCCGCTGCGTGGCATCAGGCCGCGCCACAGGCTGCCGCCTCCGCCGATACCGCGGGACCGCACGCCGCGCCGCCGCCCGCCGCCGCCGCGTGGCAACACGCCGCGCCACAGGCTGCGACCTCCGCTGCTACCGCGGGGCCGCACGCCGCGCCGCCGACCGCCGCTGCTGCGTGGCTGTACGCCGTGGCACAGGCTGCGGCCGCCGCCGATACCGCGGGGCCGCACGCCGCTGCTGCGTGGCCGTACGCCGCGCCACTGGCTGCGGCCGCCGCCGATACAGCGGCGCCGCATGCCGCGCCACCGCCCGCCGCCGCTGCGTGGCATCAGGCCGCGCCACAGGCTGCCGCCTCCGCCGATAACGCGAGACCGCACGCCGCGCCGCCGCCCGCCGCCGCCGCGTGGCATCACACCGCGCCACAGGTTGCGGCCTCCGCTGCTACCGCGGGGCCGCACGCCGCGCCACAGCCCGCCGCCGCTACGCGGCCGCACGCCGCTGCCGCCTTCGCTGCTGCCGCGGGGCCGCACGCCGCGCCACCGACCGCCACCGATACGCGGCCGCATGCCGCGTCGCCGGCCGCCTCCGCCGCAGGGACGCAAGCCGCCACCGCCGCCACCACCGCCGCTCCGCCGCATTGGGACGCAGGAGCCGCAGCCGAGGGCCCGTACATGCGAACTAAGATGCCAAAGTTCATGTACGACCTGCCGCAGTTCGACGGATCTCCAGAGAAATGGCTGCGGTACCGCGCCGCGTTCCGTAATACGGAACGATACTTTTCAAACTACGAAAACGCGGCGCGGATCGGACACAGCCTGCGCGGCCCAGCAGAGTCGGCAGTCTCGAGCCGACTCGCCGCCGCGGCCGGAGCGGAGGAGCTGATGACGGCGCTGGAAAGAAGGTTCGGCCAGCCGGAAGCGCTGATCAAACGTGAGCTAGCCAAGCTGCGAGCCCTGCCCAAGCTGCCCGACAGCTCTCGAGACGTATGTACCTTCTCGAGCCAGCTGTCCAACATCGTGCAGACGATCGTGGGGCTCGACCACGCCCACTTGCTGCACAGCGTGGAGCTCCTTCAAGCCGTCACCGACAAGTTCTCCGCAATCATGCGAAACAATTGGCTCCGCCACCCTCAGCGAAAGACGGACACCCGCCCGGCCCTGGTGGTGCTGTCCGACTTCCTGGAAGATGAGGCGGACAATTGCGCCGCGGATGCGACGCTCGGGCCAAGCGGTGGCAAGATGGACATGACGGAGCCGCGCCGCGGCAACCGCGGGGGGCGCAGCACCGAGAAGGCCTACACCGCGGAGAGCGAGGACGAGAAGGACGCGCCCGAGCCAAGCCGCGGCAACAAAAAGGCGCGCGGCACCGAATATGCTTACGCTGCCGAGGCCGAGGAGAAGTCGGAAGGGAAGGAGAAGAAGTGCCCAGCTTGCTCAGCCGAGCACCACCTACCGGACTGCCACCGTTTTAAGTCAGCCGATATAGACGAACGGTGGAAGTTGGTAAAGAAGGAAAGGGTCTGCTTCCGGTGCTTAAAGAGCCGGCACCGGCGCAACAGGTGCAAGGCAGCGAGGTGCGGTGTGGACGAATGCACGATTGGGCACCATTTCCTCCTTCACAACCCGGCAAGGAAAGAAGAGAGTGTTACCACGGCCACAGAGGTAGTCGCGGCAGCGACCCGCGCCGATCGAGTGCTCCTCAAGATTGTTCCTGTGGTGCTGTCTGGACCGGCCGGGACGATAGACACGTTCGCGCTGCTCGACGAGGGATCTACGATCACAATGATCAACGCCACAGTCGCCGAGTTGCTGGGCGCGAAGGGCCGGCCGGATCCCCTGCGAGTGCTGGGGATCAGCGGGACTCACGTCAACGTCACTGGGTCTCGCCGCGTAAACCTGAGTGTCCGCGGCAAGCACGGGACGGAGGTGCACCAACTAGTCGGCGCAAGGACAGTGGACCGGCTGCGATTCCCCAGCCAGGCCGTCACGCACGCTGCGCTACAGGAGTGCAGCCACCTCGCAGGCCTCCAGTCAGTGCTGACGTACGAGCACGCGTCGCCGACCCTGCTCATCGGGCAGGACAACTGGCAGCTCATCATCTCGAGGGAGATCCGGAGCGGCCGCCCCGATGAGCCGGTTGCCTCCCGCACCCAGCTAGGCTGGGTCCTGCACGGCGGGAGGAGCTCGGCGACGACGCCGGTGGAAAGCTGTGGAGTCGCGTGGAGCACAGACCCGGGAGTCGAGGAACGACACCGGCGGGAGCTACGGCCACAACCCGCTCAGCCGACCAAGCTCGAACGCACCATCGTGGTATCGCCGCTAAGTCCTACGCCGCCGCCGCCGCGTAGCAGCACGCCGCCTCCGCCGCGTCGCAGCACGCTGCCGCCGCCGCGTAGCAGCACGCCGCCTCCGCCGCTTCGTAGCACGCCGCCGCCGTCGCGTCGTAGCACGCCGCCGCCGCGTAGCAGCACGTCGCCGCCGCCGCGTCGCAGCACGCCGCCGCATCGCAGCACGCCGCCGCCGCCGCGTCGCAGCACGCCGCCGCCGCCGCGTCGCAGCACGCCGCCGCGTAGCAGCACGCCGCCGCCGCCGCGTCGCAGCACGCCGCCTCCGCCGCGTCGTAGCACGCCGCTGCCGCTGCGTAGCAGCACGCCGCCTCCGCCGCGCCGTAACACGCCGCTGCCGCCACGTCGCAGCACGCCGCTGCCGCTTCGTAGCAGCACGCCGCCGCCGCCGCGTCGCAGCACGCCGCCGCCGCGTAGCAGCACGCCGCCGCCGCCGCGTCGCAGCACGCCGCAGCCGCCGCGTAGCAGCACGCCGCCTCCGCCGCGTCGCAGCACGCCGCCGCCGCCGCGTCGCAGCACGCCGCCTCCGCCGCGTCGCAGCACGCCGCCGCCGCCACGTTGCAGCACGCCGCTGCGTAGCAGCACGTTCCTGCCCTGGCTACAACACCGGCGGGAGCCGCGAAGGCGCGGCAGACTCCCAGAAGGCGGCGGAGGGACTTCGTCACCACGGCAGGCTGCAAACTCCTACGCCACACCTGGTCACGGGCGAGATGGACAAGACGCGCGTCTTCGACGTACTGACTGCGGGACGCCTCTTCAGGATACCGAAGGTCGTTGTCCTTCCTACCGAAGCGGTTCGAGCCGAGCTGCGACGGCGGGAGAATGTTACGGACAACGACAGCCCCGCAGCCAGCGCATGAGAGCACGACGCGCACGTCTTAGCTTAGGGCCTAGAACAGCGAGGAAGCAGCCGTCGTACCAGAGAGAGAGGACCTCCTACAAGTGGAGCACATCGGGAAGACGGCAAGACACAGCGGCATTGCAGAAGAGCTTTCCCGCCGACGCGGTCGACTATCGGCTAGCAAGTGCCGCCGTACTGCCGTCCCTCTCTCTCCGCGCCGCCGCGTTTGTCTCGCTCTGGCAAACCTGTCGCTTCGTCCGTGTTGCTCCGGTACTACTACCGAAGCCTACGGGGCGGCGCGCGGCGCGGCGCGGCGGCAACGCGGCGGCGGGCGGCGGCGCGGCGGCGGGCgtccgcctTTCTCCACCTGCTGCCGGAGCTGATACGCCGCCGGTCGTTGACACCCGAACAGCAGAGCCGGTCGTCGCCAAGACGAACACGCTTCCATCGGCCGGTCCACGACTTCGATACCTCGAACGCTTTCCGTGCCTCGCCAACAGCAAATGCCGCTCCTGGGGGTACTCAACGGAAGGGAGGGAGAGGCTAGGGAGATGGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGCGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAAACGGAAACGGAGTGTTAAAGATTatgatgccgccgcccCGCGCCCCGGTGCGGCAGCGGCGGCGGTGCCCGGCGGCGCGGCGTCTATCATGCGCGGGGCGGATCTCGGCGTGTCGCCGCCGCAGCGGCTCTGCAGAGAACTAATGCATTCGCTGTTCCGCGAGCGCGACTCCTGTGGCGCTCCGGCGGTCACTCTGACTCGGTCCTGCGCGATGCGCATCTCTCCGGGCGACGGCGGGCCCGCTCTCATATGCTCGCAGTGCCTGCAAGAGCTGGAAGTCACGCGAGACTTCTTGAGCAAGTGCGAGAGTGCCGAGAGAACTCTCGCTTCGGTGCTCAACATAAAAAAAGAACCGCACTGGAGCAAAGACGATACAGTGGAAAACGCACACGACAGGTCTGACGGAGAATCAGAGAAAGTGCAGGACACAGTCATCGACGTAGCTGTGAAGAAAGAAAAGAAAGTAAGGAAAAAAGTGAAATCTAAGAAATTGGGAAATGAGCCGGAGAAAATCGCAACGGAAACGGGGTTGACGTGCGATACTTGTGGCCGTGCGTTTGCACACGCGGGAAACCTCAGAACACATCAGCGCCTGCACACTGGAGAGAAGCCCTTTGCTTGTGATATGTGCGAGAAATCATTCTCTAAGAAGGATAACCTCATGGTGCACAGGAAAAGGCACCTGAACAAGCGTTCGTTCTCGTGCGAGACGTGCGGAGCGTCGCACTACACGGCGTACGAGCTGCGTGTGCACGCACGCACGCACACGGGGGACAAGCCGCACGCGTGCGCGGTGTGCGGCCGCCGATTCACCGCGTCCAACAACCTCTACatacaccaacgcacccacactgGTGAAAAACCTTACGTCTGCCCAGTATGCGGCAAGAGATTTACGAGCAACAAGCTGGCCGCGCACGCTCGCACGCACACCGGAGAGAAACAACACGTCTGCACGCTCTGCGGTCGTCAATTCGCATCGCCGAACGTTCTCAAGATCCACATGCGGCGGCACACCGGCGAGAAGCCGTACCGCTGCAGCGTGTGCGGGCAACACTACGCGCACACGCAGTCGCTCAACAAGCACCGGCGCCGGCGGCACGCGCCCGGCACGCCTCGCCCGCCGCTCTACACGCAGGTAGATAGATACCTACACGCCTTACTAGACACCGGCGAGAAGCCGTACCGCTGCAGCGTGTGCGGGCGACACTACGCGCACACGCAGTCGCTCAACAAGCACCGGCGCCGGCGGCACGCGCCCGGCACGCCTCGCCCGCCGCTCTACACGCACGTAGATAGATACCTACACGCCTTACTAGACACCGGCGAGAAGCCGTACCGCTGCAGCGTGTGCGGGCAACACTACGCGCACACGCAGTCGCTCAACAAGCACCGGCGCCGGCGGCACGCGCCCGGCACGCCTCGCCCGCCGCTCTACACGCACGTAGATAGATACCTACACGCCTTACTAGACACCGGCGAGAAGCCGTACCGCTGCAGCGTGTGCGGGCAACACTACGCGCACACGCAGTCGCTCAACAAGCACCGGCGCCGGCGGCACGCGCCCGGCACGCCTCGCCCGCCGCTCTACACGCAGGTAGATAGATACCTACACGCCTTACTAGACACCGGCGAGAAGCCGTACCGCTGCAGCGTGTGCGGGCAACACTACGCGCACACGCAGTCGCTCAACAAGCACCGGCGCCGGCGGCACGCGCCCGGCACGCCTCGCCCGCCGCTCTACACGCAGGTAGATAGATACCTACACGCCTTACTAGACACCGGCGAGAAGCCGTACCGCTGCAGCGTGTGCGGGCAACACTACGAGCACACGCAGTCGCTCAACAAGCACCGGCGCCGGCGGCACGCGCCCGGCACGCCTCGACCGCCGCTCTACACGCAGGAACACAACAAAGGAGACGGCGAACAGTCGGCGGAGAAGCAGAATTACTTCAAATACGAAGATGCCACAAGGAATGCTCTTGCCAATGGATCTGAGTGCGAGGAGGTTCAGAGCAGCCTTAATCTAGTCCCCACCACTCACAACCAACATCTAGACAACATCACGTGA
Protein Sequence
MPITRSTKNARQRATESLRDEARVPPNDGSTPTSSEPVTSPPTAGTTSRETETEWSHERQSEDEAPPKHSAGGRPTVATAGPECVPEQSAPLPTAHHDVTRRDDVGAGVFGHSAVPTAHHDVTRRDDVGAREFGPSAVPAAYSDVSARVSGPSVVPTAQHDVTRRDDVSAQVFGQSVVPPTAHAGVTHRDDAGAPVQRLSEVPRAAPPRSRASTGRGAGSVRSARSSKLVAELALQEELTQLALEEAQARTKTLKAIAQQEQEEAQARTTALKARLERLQAEQLERASTSDEEGDDELQRGRLEDWIQGHTQHRREREPQLVPPTERERATLGLRSEAVTAEHPPNTATEVNLHDAAAAVWRQDAPPPASAVAGTRAALPPAAAAWLHDAPPAAAAAAGTRAALPPAAAAWLYAAAQAAAAANTAEPHAAPPTAAAAWPYAAPQAAAAADTAGPHAAPPPAAAAWHQAAPQAAASADTAGPHAAPPPAAAAWQHAAPQAATSAATAGPHAAPPTAAAAWLYAVAQAAAAADTAGPHAAAAWPYAAPLAAAAADTAAPHAAPPPAAAAWHQAAPQAAASADNARPHAAPPPAAAAWHHTAPQVAASAATAGPHAAPQPAAATRPHAAAAFAAAAGPHAAPPTATDTRPHAASPAASAAGTQAATAATTAAPPHWDAGAAAEGPYMRTKMPKFMYDLPQFDGSPEKWLRYRAAFRNTERYFSNYENAARIGHSLRGPAESAVSSRLAAAAGAEELMTALERRFGQPEALIKRELAKLRALPKLPDSSRDVCTFSSQLSNIVQTIVGLDHAHLLHSVELLQAVTDKFSAIMRNNWLRHPQRKTDTRPALVVLSDFLEDEADNCAADATLGPSGGKMDMTEPRRGNRGGRSTEKAYTAESEDEKDAPEPSRGNKKARGTEYAYAAEAEEKSEGKEKKCPACSAEHHLPDCHRFKSADIDERWKLVKKERVCFRCLKSRHRRNRCKAARCGVDECTIGHHFLLHNPARKEESVTTATEVVAAATRADRVLLKIVPVVLSGPAGTIDTFALLDEGSTITMINATVAELLGAKGRPDPLRVLGISGTHVNVTGSRRVNLSVRGKHGTEVHQLVGARTVDRLRFPSQAVTHAALQECSHLAGLQSVLTYEHASPTLLIGQDNWQLIISREIRSGRPDEPVASRTQLGWVLHGGRSSATTPVESCGVAWSTDPGVEERHRRELRPQPAQPTKLERTIVVSPLSPTPPPPRSSTPPPPRRSTLPPPRSSTPPPPLRSTPPPSRRSTPPPRSSTSPPPRRSTPPHRSTPPPPRRSTPPPPRRSTPPRSSTPPPPRRSTPPPPRRSTPLPLRSSTPPPPRRNTPLPPRRSTPLPLRSSTPPPPRRSTPPPRSSTPPPPRRSTPQPPRSSTPPPPRRSTPPPPRRSTPPPPRRSTPPPPRCSTPLRSSTFLPWLQHRREPRRRGRLPEGGGGTSSPRQAANSYATPGHGRDGQDARLRRTDCGTPLQDTEGRCPSYRSGSSRAATAGECYGQRQPRSQRMRARRARLSLGPRTARKQPSYQRERTSYKWSTSGRRQDTAALQKSFPADAVDYRLASAAVLPSLSLRAAAFVSLWQTCRFVRVAPVLLPKPTGRRAARRGGNAAAGGGAAAGVRLSPPAAGADTPPVVDTRTAEPVVAKTNTLPSAGPRLRYLERFPCLANSKCRSWGYSTEGRERLGRWRERERERERESEREREREREREREREREKRKRSVKDYDAAAPRPGAAAAAVPGGAASIMRGADLGVSPPQRLCRELMHSLFRERDSCGAPAVTLTRSCAMRISPGDGGPALICSQCLQELEVTRDFLSKCESAERTLASVLNIKKEPHWSKDDTVENAHDRSDGESEKVQDTVIDVAVKKEKKVRKKVKSKKLGNEPEKIATETGLTCDTCGRAFAHAGNLRTHQRLHTGEKPFACDMCEKSFSKKDNLMVHRKRHLNKRSFSCETCGASHYTAYELRVHARTHTGDKPHACAVCGRRFTASNNLYIHQRTHTGEKPYVCPVCGKRFTSNKLAAHARTHTGEKQHVCTLCGRQFASPNVLKIHMRRHTGEKPYRCSVCGQHYAHTQSLNKHRRRRHAPGTPRPPLYTQVDRYLHALLDTGEKPYRCSVCGRHYAHTQSLNKHRRRRHAPGTPRPPLYTHVDRYLHALLDTGEKPYRCSVCGQHYAHTQSLNKHRRRRHAPGTPRPPLYTHVDRYLHALLDTGEKPYRCSVCGQHYAHTQSLNKHRRRRHAPGTPRPPLYTQVDRYLHALLDTGEKPYRCSVCGQHYAHTQSLNKHRRRRHAPGTPRPPLYTQVDRYLHALLDTGEKPYRCSVCGQHYEHTQSLNKHRRRRHAPGTPRPPLYTQEHNKGDGEQSAEKQNYFKYEDATRNALANGSECEEVQSSLNLVPTTHNQHLDNIT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-