Nswa027768.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nematopogon swammerdamellus
Gene Symbol
-
Assembly
GCA_946902865.1
Location
CAMPPV010001244.1:87253-115040[+]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 29 5.8e-09 1.5e-05 25.8 0.0 3 44 46 84 44 84 0.96
2 29 0.28 7.4e+02 1.2 0.0 31 44 99 112 92 112 0.88
3 29 0.28 7.4e+02 1.2 0.0 31 44 127 140 120 140 0.88
4 29 0.28 7.4e+02 1.2 0.0 31 44 155 168 148 168 0.88
5 29 0.28 7.4e+02 1.2 0.0 31 44 183 196 176 196 0.88
6 29 0.28 7.4e+02 1.2 0.0 31 44 211 224 204 224 0.88
7 29 0.28 7.4e+02 1.2 0.0 31 44 239 252 232 252 0.88
8 29 0.28 7.4e+02 1.2 0.0 31 44 267 280 260 280 0.88
9 29 0.28 7.4e+02 1.2 0.0 31 44 295 308 288 308 0.88
10 29 0.28 7.4e+02 1.2 0.0 31 44 323 336 316 336 0.88
11 29 1.3e-12 3.5e-09 37.4 6.6 1 44 362 403 362 403 0.98
12 29 0.24 6.3e+02 1.4 1.4 28 44 464 480 452 480 0.84
13 29 0.24 6.3e+02 1.4 1.4 28 44 541 557 529 557 0.84
14 29 0.24 6.3e+02 1.4 1.4 28 44 618 634 606 634 0.84
15 29 0.24 6.3e+02 1.4 1.4 28 44 695 711 683 711 0.84
16 29 0.093 2.4e+02 2.7 1.2 25 44 769 788 767 788 0.88
17 29 0.24 6.3e+02 1.4 1.4 28 44 849 865 837 865 0.84
18 29 2 5.3e+03 -1.6 2.7 27 43 925 941 917 942 0.87
19 29 0.24 6.3e+02 1.4 1.4 28 44 1003 1019 991 1019 0.84
20 29 0.24 6.3e+02 1.4 1.4 28 44 1080 1096 1068 1096 0.84
21 29 0.24 6.3e+02 1.4 1.4 28 44 1157 1173 1145 1173 0.84
22 29 2 5.3e+03 -1.6 2.7 27 43 1273 1289 1265 1290 0.87
23 29 0.24 6.3e+02 1.4 1.4 28 44 1351 1367 1339 1367 0.84
24 29 0.25 6.5e+02 1.4 2.0 27 44 1427 1444 1418 1444 0.88
25 29 1.3 3.5e+03 -1.0 0.1 35 44 1512 1521 1503 1521 0.90
26 29 0.24 6.3e+02 1.4 1.4 28 44 1582 1598 1570 1598 0.84
27 29 2e-11 5.2e-08 33.7 0.1 1 44 1626 1667 1626 1667 0.98
28 29 3.6e-07 0.00094 20.0 0.4 17 44 1680 1705 1674 1705 0.94
29 29 0.053 1.4e+02 3.5 0.3 17 36 1718 1735 1713 1736 0.88

Sequence Information

Coding Sequence
ATGACGCAGCTTGGTCGGCGTGGTCAGTTGGTGTCGCGTACTGCTGACGTAGTCCTCTGTGGAGGCGCGCGGCGGCGGGGCGAGCCCGGCGAAGAAGACAAAAATTCGGCCAAGGGACACGTACAGCAAAGCTGGCTGTGGGACTTTTTTGAAAAAGTCGATGGCAATGAAGCGCGCTGCATAATCTGCCAGCAGACGTATGCGTACGCCCCCATCAGCAACCTGGCGGAGCATCTAGACGGGAAGCACCCCACGCTGGCCTATCCCGACGACCGCGACTGCGCTGATGAGCTAGACATCAGCAACCTGGCGGAGCATCTAGACGGGAAGCACCCCACGCTGGCCTATCCCGACGACCGCGACTGCGCTGATGAGCTAGACATCAGCAACCTGGCGGAGCATCTAGACGGGAAGCACCCCACGCTGGCCTATCCCGACGACCGCGACTGCGCTGATGAGCTAGACATCAGCAACCTGGCGGAGCATCTAGACGGGAAGCACCCCACGCTGGCCTATCCCGACGACCGCGACTGCGCTGATGAGCTAGACATCAGCAACCTGGCGGAGCATCTAGACGGGAAGCACCCCACGCTGGCCTATCCCGACGACCGCGACTGCGCTGATGAGCTAGACATCAGCAACCTGGCGGAGCATCTAGACGGGAAGCACCCCACGCTGGCCTATCCCGACGACCGCGACTGCGCTGATGAGCTAGACATCAGCAACCTGGCGGAGCATCTAGACGGAAAGCACCCCACGCTGGCCTATCCCGACGACCGCGACTGCGCTGATGAGCTAGACATCAGCAACCTGGCGGAGCATCTAGACGGGAAGCACCCCACGCTGGCCTATCCCGACGACCGCGACTGCGCTGATGAGCTAGACATCAGCAACCTGGCGGAGCATCTAGACGGGAAGCACCCCACGCTGGCCTATCCCGACGACCGCGACTGCGCTGATGAGCTAGACATCAGCAACCTGGCGGAGCATCTAGACGGGAAGCACCCCACGCTGGCCTATCCCGACGACCGCGACTGCGCTGATGAGGCGGAGGGGGAGGAGGACGCGAGGAGCCGGCGGACGAGTCGCGTGTGGAATTTCTTCCATCGTATTAATGCGTCCAAGGCGCAGTGCAAGACTTGCCACCAGCTGTACAATCACAGCACCACCACAACCAACCTGCGCAGACACGTCGAGCGCAAACATCCGCACATCTCCTGGCACACAGAACTACCGGCGCGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCGCGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCGCGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCGCGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCGCGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCGCGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCGCGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCACGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCGCGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCGCGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCGCGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCGCGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCGCGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCGCGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACACAACTACCGGCACGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCGCGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCGCGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCGCGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCACGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCACGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCACGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCTGCACATCTCCTGGCACACAGAACTACCGGCACGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCTGCACATCTCCTGGCACAAAGAACTACCGGCACGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCGCGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCGCGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCGCGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCGCGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACACAACTACCGGCACGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCGCGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCGCGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCACGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCACGCACGACATCCGCACATCTCCTGGCACACAGAACTACCGGCACGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCACGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCACGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCTGCACATCTCCTGGCACACAGAACTACCGGCACGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCGCGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCGCGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCGCGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCGCGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCACGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCACGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCACGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCGCGCACGGTAAGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCACGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCGCGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCGCGCACGGTACGTATCTACTGTACAAACACATCGAGCGCAGACATCCGCACATCTCCTGGCACACAGAACTACCGGCACGCACGACTCCGACGAAGAGTGAAGACGCGAAGAGGAGAATTCCCCACCGGAGCCGAGTGTGGCGATTCTTCACGAGCGTCGATGCGGATGCGATGACGGTGCGCTGCAAGCTGTGCAGCGGCACGTACAGCTCTGCCGTCAGCAACATGCGCAAGCACCTCGCCTCCAAGCACCCGCTCGTGTCCGACCAAGCTGCCGCCGGCAACATGACGGTGCGCTGCAAGCTGTGCAGCGGCACGTACAGCTCTGCCGTCAGCAACATGCGCAAGCACCTCGCCTCCAAGCACCCGCTCGTGTCCGACCAAGCTGCCGCCGGCAACATGACGGTGCGCTGCAAGCTGTGCAGCGGTACGTATAGCTCTGCCGTCAGCAACATGCGTGTGCGCAATTGCACCAGTGAACTGTAA
Protein Sequence
MTQLGRRGQLVSRTADVVLCGGARRRGEPGEEDKNSAKGHVQQSWLWDFFEKVDGNEARCIICQQTYAYAPISNLAEHLDGKHPTLAYPDDRDCADELDISNLAEHLDGKHPTLAYPDDRDCADELDISNLAEHLDGKHPTLAYPDDRDCADELDISNLAEHLDGKHPTLAYPDDRDCADELDISNLAEHLDGKHPTLAYPDDRDCADELDISNLAEHLDGKHPTLAYPDDRDCADELDISNLAEHLDGKHPTLAYPDDRDCADELDISNLAEHLDGKHPTLAYPDDRDCADELDISNLAEHLDGKHPTLAYPDDRDCADELDISNLAEHLDGKHPTLAYPDDRDCADEAEGEEDARSRRTSRVWNFFHRINASKAQCKTCHQLYNHSTTTTNLRRHVERKHPHISWHTELPARTVRIYCTNTSSADIRTSPGTQNYRRARYVSTVQTHRAQTSAHLLAHRTTGAHGTYLLYKHIERRHPHISWHTELPARTVRIYCTNTSSADIRTSPGTQNYRRARYVSTVQTHRAQTSAHLLAHRTTGAHGTYLLYKHIERRHPHISWHTELPARTVRIYCTNTSSADIRTSPGTQNYRHARYVSTVQTHRAQTSAHLLAHRTTGAHGTYLLYKHIERRHPHISWHTELPARTVRIYCTNTSSADIRTSPGTQNYRRARYVSTVQTHRAQTSAHLLAHRTTGAHGTYLLYKHIERRHPHISWHTELPARTVRIYCTNTSSADIRTSPGTQNYRRARYVSTVQTHRAQTSAHLLAHTTTGTHGTYLLYKHIERRHPHISWHTELPARTVRIYCTNTSSADIRTSPGTQNYRRARYVSTVQTHRAQTSAHLLAHRTTGAHGTYLLYKHIERRHPHISWHTELPARTVRIYCTNTSSADIRTSPGTQNYRHARYVSTVQTHRAQTSAHLLAHRTTGTHGTYLLYKHIERRHLHISWHTELPARTVRIYCTNTSSADICTSPGTKNYRHARYVSTVQTHRAQTSAHLLAHRTTGAHGTYLLYKHIERRHPHISWHTELPARTVRIYCTNTSSADIRTSPGTQNYRRARYVSTVQTHRAQTSAHLLAHRTTGAHGTYLLYKHIERRHPHISWHTQLPARTVRIYCTNTSSADIRTSPGTQNYRRARYVSTVQTHRAQTSAHLLAHRTTGAHGTYLLYKHIERRHPHISWHTELPARTVRIYCTNTSSADIRTSPGTQNYRHARHPHISWHTELPARTVRIYCTNTSSADIRTSPGTQNYRHARYVSTVQTHRAQTSAHLLAHRTTGTHGTYLLYKHIERRHLHISWHTELPARTVRIYCTNTSSADIRTSPGTQNYRRARYVSTVQTHRAQTSAHLLAHRTTGAHGTYLLYKHIERRHPHISWHTELPARTVRIYCTNTSSADIRTSPGTQNYRRARYVSTVQTHRAQTSAHLLAHRTTGTHGTYLLYKHIERRHPHISWHTELPARTVRIYCTNTSSADIRTSPGTQNYRHARYVSTVQTHRAQTSAHLLAHRTTGAHGKYLLYKHIERRHPHISWHTELPARTVRIYCTNTSSADIRTSPGTQNYRRARYVSTVQTHRAQTSAHLLAHRTTGAHGTYLLYKHIERRHPHISWHTELPARTTPTKSEDAKRRIPHRSRVWRFFTSVDADAMTVRCKLCSGTYSSAVSNMRKHLASKHPLVSDQAAAGNMTVRCKLCSGTYSSAVSNMRKHLASKHPLVSDQAAAGNMTVRCKLCSGTYSSAVSNMRVRNCTSEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-