Nswa027771.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nematopogon swammerdamellus
Gene Symbol
-
Assembly
GCA_946902865.1
Location
CAMPPV010001244.1:122897-132701[+]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 5.3e-07 0.0014 19.5 0.8 17 44 3 28 2 28 0.96
2 15 1e-06 0.0027 18.6 0.9 17 44 32 57 30 57 0.96
3 15 2.7e-07 0.00071 20.4 0.4 17 44 70 95 64 95 0.94
4 15 2.3e-07 0.00059 20.7 0.3 17 44 108 133 102 133 0.94
5 15 2.7e-07 0.00071 20.4 0.4 17 44 146 171 140 171 0.94
6 15 2.7e-07 0.00071 20.4 0.4 17 44 184 209 178 209 0.94
7 15 2.3e-07 0.00059 20.7 0.3 17 44 222 247 216 247 0.94
8 15 2.7e-07 0.00071 20.4 0.4 17 44 260 285 254 285 0.94
9 15 2.7e-07 0.00071 20.4 0.4 17 44 298 323 292 323 0.94
10 15 2.3e-07 0.00059 20.7 0.3 17 44 336 361 330 361 0.94
11 15 2.7e-07 0.00071 20.4 0.4 17 44 374 399 368 399 0.94
12 15 2.7e-07 0.00071 20.4 0.4 17 44 412 437 406 437 0.94
13 15 2.3e-07 0.00059 20.7 0.3 17 44 450 475 444 475 0.94
14 15 2.7e-07 0.00071 20.4 0.4 17 44 488 513 482 513 0.94
15 15 2.7e-07 0.00071 20.4 0.4 17 44 526 551 520 551 0.94

Sequence Information

Coding Sequence
ATGACGGTGCGCTGCAAGCTGTGCAGCGGTACGTACAGCTCTGCCGTCAGCAACATGCGTAAGCACCTCGCCTCCAAGCACCCGCTCATGACGGTGCGCTGCAAGCTGTGCAGCGGTACGTACAGCTCTGTCGTCAGCAACATGCGCAAGCACCTCGCCTCCAAGCACCCGCGCGTGTCCGACCAAGCTGCCGCCGGCAACATGACGGTGCGCTGCAAGCTGTGCAGCGGCACGTACAGCTCTGCCGTCAGCAACATGCGTAAGCACCTCGCCTCCAAGCACCCGCTCGTGTCCGACCAAGCTGCCGCCGGCAACATGACGGTGCGCTGCAAGCTGTGCAGCGGCACGTACAGCTCTGCCGTCAGCAACATGCGCAAGCACCTCGACTCCAAGCACCCGCTCGTGTCCGACCAAGCTGCCGCCGGCAACATGACGGTGCGCTGCAAGCTGTGCAGCGGTACGTACAGCTCTGCCGTCAGCAACATGCGTAAGCACCTCGCCTCCAAGCACCCGCTCGTGTCCGACCGAGCTGCCGCCGGCAACATGACGGTGCGCTGCAAGCTGTGCAGCGGCACGTACAGCTCTGCCGTCAGCAACATGCGTAAGCACCTCGCCTCCAAGCACCCGCTCGTGTCCGACCAAGCTGCCGCCGGCAACATGACGGTGCGCTGCAAGCTGTGCAGCGGCACGTACAGCTCTGCCGTCAGCAACATGCGCAAGCACCTCGACTCCAAGCACCCGCTCGTGTCCGACCAAGCTGCCGCCGGCAACATGACGGTGCGCTGCAAGCTGTGCAGCGGTACGTACAGCTCTGCCGTCAGCAACATGCGTAAGCACCTCGCCTCCAAGCACCCGCTCGTGTCCGACCGAGCTGCCGCCGGCAACATGACGGTGCGCTGCAAGCTGTGCAGCGGCACGTACAGCTCTGCCGTCAGCAACATGCGTAAGCACCTCGCCTCCAAGCACCCGCTCGTGTCCGACCAAGCTGCCGCCGGCAACATGACGGTGCGCTGCAAGCTGTGCAGCGGCACGTACAGCTCTGCCGTCAGCAACATGCGCAAGCACCTCGACTCCAAGCACCCGCTCGTGTCCGACCAAGCTGCCGCCGGCAACATGACGGTGCGCTGCAAGCTGTGCAGCGGTACGTACAGCTCTGCCGTCAGCAACATGCGTAAGCACCTCGCCTCCAAGCACCCGCTCGTGTCCGACCGAGCTGCCGCCGGCAACATGACGGTGCGCTGCAAGCTGTGCAGCGGCACGTACAGCTCTGCCGTCAGCAACATGCGTAAGCACCTCGCCTCCAAGCACCCGCTCGTGTCCGACCAAGCTGCCGCCGGCAACATGACGGTGCGCTGCAAGCTGTGCAGCGGCACGTACAGCTCTGCCGTCAGCAACATGCGCAAGCACCTCGACTCCAAGCACCCGCTCGTGTCCGACCAAGCTGCCGCCGGCAACATGACGGTGCGCTGCAAGCTGTGCAGCGGTACGTACAGCTCTGCCGTCAGCAACATGCGTAAGCACCTCGCCTCCAAGCACCCGCTCGTGTCCGACCGAGCTGCCGCCGGCAACATGACGGTGCGCTGCAAGCTGTGCAGCGGCACGTACAGCTCTGCCGTCAGCAACATGCGTAAGCACCTCGCCTCCAAGCACCCGCTCGTGTCCGACCAAGCTGCCGCCGGCAACAGGTATGAGAGTTCGCGCTTGAAGGGTGAAGAGTCGAGTGCGGACGACAGATCCGACCAACAGGAGGCTCCGCCGGACCACCAGTTCACAGAGCTGTACATCGAAGAGCCGCCGCAGTCGCCCGACGCCGAGTCGCTGAGCCCGCCGCCGCCGCCGCCGCCGCCGCCACCCCGGCAACGGCAACACAAACGGCAACTGAGGCAACGCAGTCGGAAGCGCGGCAGGAGTAGACAGTCTCGAAGGGCTGACTCCACAGATTCTGAAGATGGTGCACCGAGAGACAGGCGCAGGCGTAGAGAGAATAGTGCAGAGTCCGAGGAGGACGCGATCGATCAGTTCGGGCGCTACGTGTCGGTGCTGCTGCGCCGCCTGCCGCCGCACGTCGCCAACAGGCTGCAGGCCGAGCTGGTCGCGCAGATCATGCAGGCGCAGGTGAGAGAGAAGAGTGCAGAGTCCGAGGAGGACGCGATCGATCAGTTCGGGCGCTACGTGTCGGTGCTGCTGCGCCGCCTGCCGCCGCGCGTCGCCAACAGGCTGCAGGCCGAGCTGGTCGCGCAGATCATGCAGGCGCAGGTGAGAGAGAAGAGTGCAGAGTCCGAGGAGGACGCGATCGATCAGTTCGGGCGCTACGTGTCGGTGCTGCTGCGCCGCCTGCCGCCGCGCGTCGCCAACAGGCTGCAGGCCGAGCTGGTCGCGCAGATCATGCAGGCGCAGGTGAGAGAGAAGAGTGCAGAGTCCGAGGAGGACGCGATCGATCAGTTCGGGCGCTACGTGTCGGTGCTGCTGCGCCGCCTGCCGCCGCGCGTCGCCAACAGGCTGCAGGCCGAGCTGGTCGCGCAGATCATGCAGGCGCAGGTGAGAGAGAAGAGTGCAGAGTCCGAGGAGGACGCGATCGATCAGTTCGGGCGCTACGTGTCGGTGCTGCTGCGCCGCCTGCCGCCGCGCGTCGCCAACAGGCTGCAGGCCGAGCTGGTCGCGCAGATCATGCAGGCGCAGGTGAGAGAGAAGAGTGCAGAGTCCGAGGAGGACGCGATCGATCAGTTCGGGCGCTACGTGTCGGTGCTGCTGCGCCGCCTGCCGCCGCGCGTCGCCAACAGGCTGCAGGCCGAGCTGGTCGCGCAGATCATGCAGGCGCAGGTGAGAGAGAAGAGTGCAGAGTCCGAGGAGGACGCGATCGATCAGTTCGGGCGCTACGTGTCGGTGCTGCTGCGCCGCCTGCCGCCGCGCGTCGCCAACAGGCTGCAGGCCGAGCTGGTCGCGCAGATCATGCAGGCGCAGGTGAGAGAGAAGAGTGCAGAGTCCGAGGAGGACGCGATCGATCAGTTCGGGCGCTACGTGTCGGTGCTGCTGCGCCGCCTGCCGCCGCGCGTCGCCAACAGGCTGCAGGCCGAGCTGGTCGCGCAGATCATGCAGGCGCAGGTGAGAGAGAAGAGTGCAGAGTCCGAGGAGGACGCGATCGATCAGTTCGGGCGCTACGTGTCGGTGCTGCTGCGCCGCCTGCCGCCGCGCGTCGCCAACAGGCTGCAGGCCGAGCTGGTCGCGCAGATCATGCAGGCGCAGGTGAGAGAGAAGAGTGCAGAGTCCGAGGAGGACGCGATCGATCAGTTCGGGCGCTACGTGTCGGTGCTGCTGCGCCGCCTGCCGCCGCGCGTCGCCAACAGGCTGCAGGCCGAGCTGGTCGCGCAGATCATGCAGGCGCAGGTGAGAGAGAAGAGTGCAGAGTCCGAGGAGGACGCGATCGATCAGTTCGGGCGCTACGTGTCGGTGCTGCTGCGCCGCCTGCCGCCGCGCGTCGCCAACAGGCTGCAGGCCGAGCTGGTCGCGCAGATCATGCAGGCGCAGGTGAGAGAGAAGAGTGCAGAGTCCGAGGAGGACGCGATCGATCAGTTCGGGCGCTACGTGTCGGTGCTGCTGCGCCGCCTGCCGCCGCGCGTCGCCAACAGGCTGCAGGCCGAGCTGGTCGCGCAGATCATGCAGGCGCAGGTGAGAGAGAAGAGTGCAGAGTCCGAGGAGGACGCGATCGATCAGTTCGGGCGCTACGTGTCGGTGCTGCTGCGCCGCCTGCCGCCGCGCGTCGCCAACAGGCTGCAGGCCGAGCTGGTCGCGCAGATCATGCAGGCGCAGGTGAGAGAGAAGAGTGCAGAGTCCGAGGAGGACGCGATCGATCAGTTCGGGCGCTACGTGTCGGTGCTGCTGCGCCGCCTGCCGCCGCGCGTCGCCGTAACTGTCACGGAAGCCATCAAGCTAAAACTATACAGTCAGTCCATAGAGTGCGACAGCATGTGCACAGCGGCGCGGTTGGAAGCGAGCGCGCCGCCCGAGCCCCCACACACGGAGCCGCAACACGACGCGAGCAGCGATCCTCTTCCCAACTGA
Protein Sequence
MTVRCKLCSGTYSSAVSNMRKHLASKHPLMTVRCKLCSGTYSSVVSNMRKHLASKHPRVSDQAAAGNMTVRCKLCSGTYSSAVSNMRKHLASKHPLVSDQAAAGNMTVRCKLCSGTYSSAVSNMRKHLDSKHPLVSDQAAAGNMTVRCKLCSGTYSSAVSNMRKHLASKHPLVSDRAAAGNMTVRCKLCSGTYSSAVSNMRKHLASKHPLVSDQAAAGNMTVRCKLCSGTYSSAVSNMRKHLDSKHPLVSDQAAAGNMTVRCKLCSGTYSSAVSNMRKHLASKHPLVSDRAAAGNMTVRCKLCSGTYSSAVSNMRKHLASKHPLVSDQAAAGNMTVRCKLCSGTYSSAVSNMRKHLDSKHPLVSDQAAAGNMTVRCKLCSGTYSSAVSNMRKHLASKHPLVSDRAAAGNMTVRCKLCSGTYSSAVSNMRKHLASKHPLVSDQAAAGNMTVRCKLCSGTYSSAVSNMRKHLDSKHPLVSDQAAAGNMTVRCKLCSGTYSSAVSNMRKHLASKHPLVSDRAAAGNMTVRCKLCSGTYSSAVSNMRKHLASKHPLVSDQAAAGNRYESSRLKGEESSADDRSDQQEAPPDHQFTELYIEEPPQSPDAESLSPPPPPPPPPPRQRQHKRQLRQRSRKRGRSRQSRRADSTDSEDGAPRDRRRRRENSAESEEDAIDQFGRYVSVLLRRLPPHVANRLQAELVAQIMQAQVREKSAESEEDAIDQFGRYVSVLLRRLPPRVANRLQAELVAQIMQAQVREKSAESEEDAIDQFGRYVSVLLRRLPPRVANRLQAELVAQIMQAQVREKSAESEEDAIDQFGRYVSVLLRRLPPRVANRLQAELVAQIMQAQVREKSAESEEDAIDQFGRYVSVLLRRLPPRVANRLQAELVAQIMQAQVREKSAESEEDAIDQFGRYVSVLLRRLPPRVANRLQAELVAQIMQAQVREKSAESEEDAIDQFGRYVSVLLRRLPPRVANRLQAELVAQIMQAQVREKSAESEEDAIDQFGRYVSVLLRRLPPRVANRLQAELVAQIMQAQVREKSAESEEDAIDQFGRYVSVLLRRLPPRVANRLQAELVAQIMQAQVREKSAESEEDAIDQFGRYVSVLLRRLPPRVANRLQAELVAQIMQAQVREKSAESEEDAIDQFGRYVSVLLRRLPPRVANRLQAELVAQIMQAQVREKSAESEEDAIDQFGRYVSVLLRRLPPRVANRLQAELVAQIMQAQVREKSAESEEDAIDQFGRYVSVLLRRLPPRVANRLQAELVAQIMQAQVREKSAESEEDAIDQFGRYVSVLLRRLPPRVAVTVTEAIKLKLYSQSIECDSMCTAARLEASAPPEPPHTEPQHDASSDPLPN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-