Basic Information

Transcription Factor Domain

TF Family: GTF2I
Domain: GTF2I domain
PFAM: PF02946
TF Group: Other Alpha-Helix Group
Description: This region of sequence similarity is found up to six times in a variety of proteins including GTF2I. It has been suggested that this may be a DNA binding domain [2, 1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.0075 2.5e+02 3.0 0.0 36 51 46 61 40 66 0.85

2 7 0.013 4.4e+02 2.2 0.0 38 51 68 81 63 86 0.85

3 7 0.013 4.4e+02 2.2 0.0 38 51 88 101 84 107 0.84

4 7 0.0038 1.3e+02 3.9 0.0 36 51 126 141 102 146 0.55

5 7 0.014 4.7e+02 2.1 0.0 38 51 148 161 143 165 0.85

6 7 0.0032 1.1e+02 4.1 0.0 35 51 185 201 163 208 0.59

7 7 0.0037 1.3e+02 3.9 0.0 36 51 206 221 183 227 0.54

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.0075	2.5e+02	3.0	36	51	46	61	40	66	0.85
2	7	0.013	4.4e+02	2.2	38	51	68	81	63	86	0.85
3	7	0.013	4.4e+02	2.2	38	51	88	101	84	107	0.84
4	7	0.0038	1.3e+02	3.9	36	51	126	141	102	146	0.55
5	7	0.014	4.7e+02	2.1	38	51	148	161	143	165	0.85
6	7	0.0032	1.1e+02	4.1	35	51	185	201	163	208	0.59
7	7	0.0037	1.3e+02	3.9	36	51	206	221	183	227	0.54

Coding Sequence: ATGCTTCCCGACGTGATTGAGTCACCGGCCGTGGCGTCACCCGCCGACACCGCGGCAGAGAATACGCCGCGCGTCTGTGCTAGAAGCGGCACTATCATACGGCTGAGTCAGATAGGCCAGAGCATCAGAGCGCATGCTCTGACCAGCAATACCATCCCCGAGAACGTGACATATAGGAGACCTCTCTTTGGATTGGCTCTGACCAGCAATACCATCCCCGAGAACGTGACATATAGGAGACCTCTCTTTGGATTGGCTCTGACCAGCAATACCATCCCCGAGAACGTGACATATAGGAGACCTCTCTTTGGATTGGCTCTGACCAGCAATACCATCCCCGAGAACGTGACATATAGGAGACCTCTCTTTGGATTGGCTCTGACCAGCAATACCATCCCCGAGAACGTGACATATAGGAGACCTCTCTTTGGATTGGCTCTGACCAGCAATACCATCCCCGAGAACGTGACATATAGGAGACCTCTCTTTGGATTGGCTCTGACCAGCAATACCATCCCCGAGAACGTGACATATAGGAGACCTCTCTTTGGAATGGCTCTGACCAGCAATACCATCCCCGAGAACGTGACATATAGGAGACCTCTCTTTGGATTGGCTCTGACCAGCAATACCATCCCCGAGAACGTGACATATAGGAGACCTCTCTTTGGATTGTTGGCTATACTGGACTAG
Protein Sequence: MLPDVIESPAVASPADTAAENTPRVCARSGTIIRLSQIGQSIRAHALTSNTIPENVTYRRPLFGLALTSNTIPENVTYRRPLFGLALTSNTIPENVTYRRPLFGLALTSNTIPENVTYRRPLFGLALTSNTIPENVTYRRPLFGLALTSNTIPENVTYRRPLFGLALTSNTIPENVTYRRPLFGMALTSNTIPENVTYRRPLFGLALTSNTIPENVTYRRPLFGLLAILD

Sequence clustering based on sequence similarity using MMseqs2