Basic Information

Insect: Nematopogon swammerdamellus
Gene Symbol: lolal
Assembly: GCA_946902865.1
Location: CAMPPV010000790.1:307861-333560[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.3e-15 4.4e-12 46.4 0.0 3 42 2515 2555 2514 2558 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.3e-15	4.4e-12	46.4	0.0	3	42	2515	2555	2514	2558	0.94

Sequence Information

Coding Sequence: ATGGACATCCCTAACACCAGCGAAAAACAGCTAAAATTAAGACTATGGTTCTACGGAGTGTGCTCGGTGCATTTCGTCGCTTTGGGGCTGGCACTGCTGGGTATAGACTACGAGGCGTATGGGGACGAGAGAATTGTGGTGTATAGAAGTCTGCGGTTCAAGTTTTTGACAATTTGGATAAACGTTATGCACCTAATATACTTCCCGCTATGCCTGACGCTTACCTGGATGGAGTACAAGGGGAGGCAATTAAGCCGGAACTTTCAGGCGCTCGAGAGATTCAGGAACTTTTGGTTCACGGCCATCATCTTTCCTGCCACATTGTTCATCTGCATTGTATTCTGGCGAGTTTGGCTGACGGATCGTGAGGCGATAGTGCCGCGCTACTGCGACAGATTTCTTCCTCTGTGGGCGCAGCACGGTCTCCACACGAACACGATAATATTCTGTGTGCTGGAGCTGCTCGCGGTGCCTAGAATTCGGCCGCAATCAACCAACCTGCACCGTCGGGCGCTCAACATTTTACTGTTGACTTATTTCGTTACTCCACTAACGACTATCGAAAGGGCCTGCCGGGGTCTCCGAGGCCGGAGCCACGCCCGGGGTCAACATTTTGGACCTTCTCGCCGCATAGACGAGCTGTGCTTTGCCTGTGCAGTTCCCGGCTCTTCTCGACATAGAGCCCGGAACGTTCGCTCGCTGTCTCGCCTCGCACCTCGCTCCGTTCGCGTCGCGCGCACCACGACCACACGCACTGCGAGTGCCGCGCGCTCCGTACTGCAAGCGCTTCTCGACCCGCGCTCCGCGCCGCTCGCTCGGCGCGCTCGCTCCGCAATGCCTCGCCGTCGTCCGCCCGCACATTCGCCGAAGACGGTCAAGACGCGCTCCGATACGGCAAAGGAGCAAGACGGCCAGCCTGCCTTGCCGACCGATCCGCTCAACCAGTCTGTCGTCTCTATGGTGAGATCGTCGGAGATAGACCAGTCCGTCGTCCCGCCCAGAACCGCCTCAAGAGTGTCGTCGAGGCGAACCACCGCATCCGCCACAGCCAGACGAAAGCGGGAAGCTGAACTCGCCGCGGCTGAGAAGCTTGCCGCGCTCGAGAGACTAAGGTTAGAGCTTGAGGCTGACTTAGTAAAGAAGAGGCTACAAATGGAGCTTGAAAATATTGCAGATGAGGAGGCAGAGCTCAGCGACGAAAACGAAGCTTCTGATGTCCAGCAGGAAGCTAACGATGACCTCAGGAAGTCTATGGAACGCGCAGAGCAGTGGGTGCGCGACACCGCACCCCCGCGCCCCCCGCCGTTATCCAGCGACCGACGCGACGACGGCGTGAGGCGCACTGACGACACACGTGCTGCCGGAGGGACTTCCGAAATATCGCAGCTAGCCAAAGCGATTGCGGAGCTCGGCTCCCGCCCCGACCGCTACTGGCTACAACTGCCCGACTACAGCGGAAGTACCGGCGATTGGCTTGCTTTCAAAGCGGCCTACGAAGACAGCAAGACCAAATTCTCGATTAAAGAAAATTTGGCTCGCCTGCGCAGGTGCTTGCGCGGCGAGGCCAAGGCGGCCGTCTGCCACCAGTTAATCGGGAAAGGCCAACCAGAAGAAATAATGGACTCGCTCGGACGGCTCTTTGGTCGGGCTGAATTCATTATCGACGAGGAACTACAGGGCCTGCGCGACCTTCCGATGATGACGGACGTACCGCAACAAATAAATTTATTTGCGTGTCGGGTACGAAATGCCGTGGCTGCCCTTCGAGCACTCGATGAGGAGGAGTACCTCAGGAACACGGACATCGTTCGCGCGGTCAAGGCGAAGATGCAGGCTCTTATGACGCCGTGGTCCGATTACGCCTTTCCCAGACTGCAGGACACGACGCCGGAGCTAGTCAAGATAAGTGACTTTTTGACTGAGCATGCTGACAAACTCGCCCTGACCTGGCGAGTTGAGCGTCGCGACACGCCGACCGCGTCCAACCCGCCGCGCTCTGCGCCGCCGCCGCCGCCGCAAGATACACGGGCGGAGCGAGCGCGGGTCACACGCGGCGCGCAACCGCCGCCGGCAGCCCCCCAGCGAGCTCAGAAACAAGGTGTGCATGCGACCACCGATGAGGCCAGCGCCGCATGCACTATGTGTGCTTCGACCGTGCACTGCATCTCCAATTGCGGAAAGTTTAAGAAGGCGTCATCGGAGGCGAGATGGGATCATGTGAGGTCGGCGAAGTTATGCTTCCGCTGCCTACAATCTGGACACCGTTCCTTCCTGTGCCGCACGAAGAAGGGATGCAGTATTAAGGACTGTCATCGACGACATCACACCCTGCTTCACGGCGCGCCGCAGATGTCGGCGCAGACTACCACAGAAGCGCACGCGAGCGTGGACCTTCCCGAAGAGCAGCCGGAAACCGTTGCCTGCGCTCAGACCTGCCGCGGCCGCGCCCTACTAAAGATCATTCCTGTCTCGGTGCACGGGCCGCATGGCAGCCATAAGACTTTCGCTCTGTTGGACGACGGTAGTACGATCACTCTCGTGAAGACGAGCCTGGCACAAAGGATCGGCGCAAGCGGGCCTCAGGAGCCGCTCTCCATCTCCGGCATCGGATCGTCTCGCGCTATCCCCGACTCCCGGCGCGTCTCCTTCGAGATCTCCGGCCCCAACGGCAAGCGGTTCACGCTTCAAGACGCGCGCACCGTCGACCAGCTGCAACTCACGGTGCAGTCCGTGGATGGCTTCACGCACCTACCGCACCTACAAGATGTACCTGTGCGGTGCTACAGTAacgccgtcccggagctgctgattgggcaggacaactggcacctgctcataacggaagagttgcgatgcggtagccgcgacaacccagctgcttcgcgaacgccactcggatgggttcttcacggCGGCGCCGGGGGGAGCCACCATCGGGCAGTCTATTTCGCGCAACATTTTGTCGGGCACACGGCGCACTCAGATGACTGCTTGGACGCGCTTATCAAAGAGCACTACAGGCTTGAGGCGCTCGGCGTCTCGACGATCTTGCGGCAGAGCACTGACGACGGAAAGGCGCTCCGAACTCTGGAGCGGTCGTGCCGCCGAGTTGGAGAGGGACAGCGATGGCAGGCGGGTCTACTCTGGCGCAACGAGGATGTCGCCATGCCACCCAGCCGTAATAGCGCGCTCAAGAGGCTAAACAGCCTGGAAAGAAAAATGGATGCAAACCGTGACTTTGGTGAAGCTTACGTCGCTCAAATGGACCGACTCATCGACGCCGGCTACGCTACCATCGTGTCACCGACCACCTCCCCGAAGTTGtggttcctgcctcacttcgcggtcacaaatccaaataaaccaggaaaagttcggatcgttttcgatgcagcggcccgagtaagcggtcgctcgcttaatgacgaactgctaactgggcccgacctgctacaatcactgctcggtgtgctcttcaagttccgcgaaagaagagttgccgtctctgctgacgtccgcgagatgtttctgcgcgtgaagattgcacccgacgaccgaccggctcagcgattcctgtggcgggggtgggaccgagtggagccgcctcaagagtttgaaatgaccagcatgatttttggcctcgcttcatcacccactacggccatcttcgttaaaaaccagaacgctgctgactacaaagaagagttccccgaggctgctctctcggtggaaaaacaattttacatggatgactatctagagagcttcgacagtgcggagcaagcgacacgcattgcgcgtgccgtcgacgagattaatcggcgaggtggcttccatcttaccgggtgggcctcgaacgacccagaagtattgctgaggatagacccgaacaggggcaccgagttcaagagcctagatctacagactatacaggagaaaacgctcggactgcgttgggacacggcgaatgacactctgggcttcaacttgaacatggcacgcgtcccgaccgacatcgcgactggagggcgccgaccgaccaagagacagatgctcagcgtcatcatgtcgatcttcgaccctctcgggctcctgactccgattctgattcaggcgaaggtgatcctgcagcaagtgtggcgttccggcatcacgtgggacCAGTATCTCCCTGACGAAGAAGCCTCCCAGTGGGCACTATGGCTGCAAAGGCTCCGCGTCTCATGGGCGTGTCGAGTGCCTCGCTGCTACTTCGAAGGCGTCGCCGGAGCCGACATCGAGATCCATACATTCTGCGATGCCAGCCAGGACGCCTACGCGGCTGTCTCATACTTCAGATTCTCCCTGCGCGACGAGCGAGTCTAcacggcgctcgtagcgagcaagtcacgcgtcactccgctcaaaccggtctccattcctcgcctcgagctccaggcggctctcctcggaagtcgacttgctgccacgatcaagaaggaacacacacttcgtccgttgcgacaagtgtattggacagactcgcgcaccgtcctcgcgtggattcatagtgacgcgcacaactacaagtcgtttgtttcctaccgactgagcgagattgacgaactaactgacagagcagaatggcgctgggtgccaacggtggataacgtggcagacgatgctacgagatcactcgatgaactgacaccggagcatcgatggttccacggtcccgactttctacagcaactcgagcaagaatggcctgctcaaccgaccaacgtcacagcgagcgacgaagaACTTCTGAAGACAGCCCGAGCGACAAGCAGCAACATTGCAGCGACTTACGCGACTAGCATACGCGAGCGAGCCGTACCGGACGCCGCGCGGTTCTCTCGCTGGTCGCGTCTCACTCGCGCCGCGGGCTTCGTGTTGCTGTTCATCGAGAAGTGCCGAGGACGCCACATCGGAGGACTGGAGCGTCGCCACCTCGACTGGGCCGAGATTCAACTCATTCAGAAGTCACAAGAGGATGCGTTCGGAGCTGAATTAGCAAGTATGCAAGCCAAGCAACCTCTGCCGCGCGGTAGCCGCTTGCAGCATCTGTCGCCCTACCTTGACCCGTCGGGAACAATACGCCTGCGCGGCCGGACCAGCGCCGCGCCGGGCATCCCTCAGCACACGGCTGAGCCGGTGATCATGTGTGGCCGACACCGCATCACTCGGCTGCTGGTGCTTCACTACCACGTCCTCGCgcaccacgccaaccacgaggccgtgattaaccatctacgtcagcgttactgggtcgtccacttgcggcccacggtgcgagccgtggcacggcagtgccaagtctgccgtctgcgcaccgccacaccacagacaccacccatgggagaccttccggcggcgcgcctcggccaccaccaccggccgtttacgtactgtggcgtcgactacatgggcccattcgacgtgacagtgggccgtcgacatgagaagaggtactgcgcgctcttcacctgcctggtgacgcgcgcggtgcatttggagatcgccgccagcctaacaaccgactcggcgatctgcgccttgcgacgcatgatggcgcgcaggggcgccccggtcgagatctacagcgacaacggcaccaacttccacggtgccgacgtcgagcttcgccgggcctgggcggagctagacctggagaagattaagaccttcgcgctgaccagaggcgcgaactggcgcttcatcccaccggccgccccattcatgggcggtgcatgggaacgactggtgggctctgtgcgccgagctctccgcgccacacttcaccagcgagcacccacggacgaggtgcttgccacgctgctcgcagaggccgagcatactgtaaatgctcggcccctcacccatgtttcagttcaccctgcagaccctgaggcgataacgcctaaccacttcttactgggcagcgcgtccggtgtggctacaccgggcgccttcgacgacaccgacctcgtgcgtcggcgccagtggcgcgcagctcagcggctggcagaccacttctgggagcgctgggtgcgcgagtacctgccgaccttacttccgcgccccaaacaaggcgaggctcgcccagaactacgtgttggcgacctggtcgtcatagtggatgcagctcaacctcgcaatgtctggccgcgaggagtcatcgagcgcgtcctgccaggccgagatggacacgtacgagtggtcgaagtacgcaccgtcggaggactgctgcgacgtccggcgaagaggatcgtccgtcttccggtccatgaggtcGTCGGAGACCAGCCTTCGACCGAGGGGAGTAGTCTGTTCACGGCGCACCCGTCTCGGCACCCGATCGTGATCATCAAAGACGTTGGCTACGCGGACCTGCGCGTGCTGGTCGACTTCATGTACTACGGCGAGGTGAACGTTACCGAGGACCAGCTGCCCAGGATCTTGGACACGGCGAGACTTCTCAAGATCAAAGGACTGACAGAGATGCCGGACTCTACGCGACACGGCAGCCCGGGCGACGGCGGCGCCGCGGAGCCCGGCAGCCCCGAGCGGCGAGCGTGCGGCGGCAAGGAGTGCGAGGACGGCGGCGGCGGCGCGCAGTGGGAGCAGCCGGCCGGCTCGCCCGCCAGCAGGGACGCGCAGCTCAAGAGGAAGAGCCCGGGCGACGGCGGCGCCGCGGAGCCCGGCAGCCCCGAGCGGCGAGCGTGCGGCGGCAAGGAGTGCGAGGACGGCGGCGGCGCGCAGTGGGAGCAGCCGGCCGGCTCCCCAGCCAGCAGGGACGCGCAGCTCAAGAGGAAGAGCCCGGGCGACGGCGGCGCCGCGGAGCCGGGCAGCCCCGAGCGGCGAGCGTGCGGCGGCAAGGAGTGCGAGGACGGCGGCGGCGGCGCGCAGTGGGAGCAGCCGGCCGGCTCCCCAGCCAGCAGGGACGCGCAGCTCAAGAGGAAGAGCCCGGGCGACGGCGGCGCCGCGGAGCCCGGCAGCCCCGAGCGGCGCAAGACGTGCGACGAGCCGGCGGGTGCCGCGCCGGAGCCGGCGAAGGAGCTGTCGGCGGAGGCGGCGGCGGCGGCGGCGTGCGTCGCCGAGGCGGCCGGCCGCACCGCGCTGCTGCAGAACTGTCTGCCTCAGCAGAACGGCATCTATCAGCTGCCCGAGATAGCGGGCGTCTACAGCAGCGTGCTGGCGCATAGAACAGAATCAGAGGACAACAGTTTGAGAACATCGCAACATACGTACGTGGACCAGAACACGGCCTACAACCATCAAGCGATGCCGTGGGTGAACCACGGCTACGTTCACACCGCAGAGGCCTTCGCCGACAGGCAGGAGGGCGTCAACTTCACACCGGTCTCAGCCAGCGAATACTCGGAGGCTATGCCCACACCGACGGCTCCGGCATCCTCCGATATACCCGTGGACATGCAGACGCAAGGCGAGGTGCCATCCCAGCGGCCGGTGGAGACGCCCGGCAAGCGGCGGCGGACGTCGAACCCGCAAGCCGCTGAAAACTTCCAACGGGCCATCGAGGCCGTCAGATTTGGGGGCATCGGGTTTTGCAAGGCTGCCAGAATATTCGGCGTGAACAACCGAACACTCTGGCTGGAGTACAAGAAGAAGGGCTACCCCAACCACCGTCCCAGCATCCGGGAGCGGATCAAGCGCGAGCCTGCGGAGCCCCCGGCGGACGCAGCCGAGCCGGCCGCTGTCGAGGACGTGCAGGAGATAGCCAACGCACCACAGCAGCCCATCGGCTACATGATGAACCAGACGTGCTTTCAGTACCTTCAGGATAACTCGCTCCAAGGATTTTGA
Protein Sequence: MDIPNTSEKQLKLRLWFYGVCSVHFVALGLALLGIDYEAYGDERIVVYRSLRFKFLTIWINVMHLIYFPLCLTLTWMEYKGRQLSRNFQALERFRNFWFTAIIFPATLFICIVFWRVWLTDREAIVPRYCDRFLPLWAQHGLHTNTIIFCVLELLAVPRIRPQSTNLHRRALNILLLTYFVTPLTTIERACRGLRGRSHARGQHFGPSRRIDELCFACAVPGSSRHRARNVRSLSRLAPRSVRVARTTTTRTASAARSVLQALLDPRSAPLARRARSAMPRRRPPAHSPKTVKTRSDTAKEQDGQPALPTDPLNQSVVSMVRSSEIDQSVVPPRTASRVSSRRTTASATARRKREAELAAAEKLAALERLRLELEADLVKKRLQMELENIADEEAELSDENEASDVQQEANDDLRKSMERAEQWVRDTAPPRPPPLSSDRRDDGVRRTDDTRAAGGTSEISQLAKAIAELGSRPDRYWLQLPDYSGSTGDWLAFKAAYEDSKTKFSIKENLARLRRCLRGEAKAAVCHQLIGKGQPEEIMDSLGRLFGRAEFIIDEELQGLRDLPMMTDVPQQINLFACRVRNAVAALRALDEEEYLRNTDIVRAVKAKMQALMTPWSDYAFPRLQDTTPELVKISDFLTEHADKLALTWRVERRDTPTASNPPRSAPPPPPQDTRAERARVTRGAQPPPAAPQRAQKQGVHATTDEASAACTMCASTVHCISNCGKFKKASSEARWDHVRSAKLCFRCLQSGHRSFLCRTKKGCSIKDCHRRHHTLLHGAPQMSAQTTTEAHASVDLPEEQPETVACAQTCRGRALLKIIPVSVHGPHGSHKTFALLDDGSTITLVKTSLAQRIGASGPQEPLSISGIGSSRAIPDSRRVSFEISGPNGKRFTLQDARTVDQLQLTVQSVDGFTHLPHLQDVPVRCYSNAVPELLIGQDNWHLLITEELRCGSRDNPAASRTPLGWVLHGGAGGSHHRAVYFAQHFVGHTAHSDDCLDALIKEHYRLEALGVSTILRQSTDDGKALRTLERSCRRVGEGQRWQAGLLWRNEDVAMPPSRNSALKRLNSLERKMDANRDFGEAYVAQMDRLIDAGYATIVSPTTSPKLWFLPHFAVTNPNKPGKVRIVFDAAARVSGRSLNDELLTGPDLLQSLLGVLFKFRERRVAVSADVREMFLRVKIAPDDRPAQRFLWRGWDRVEPPQEFEMTSMIFGLASSPTTAIFVKNQNAADYKEEFPEAALSVEKQFYMDDYLESFDSAEQATRIARAVDEINRRGGFHLTGWASNDPEVLLRIDPNRGTEFKSLDLQTIQEKTLGLRWDTANDTLGFNLNMARVPTDIATGGRRPTKRQMLSVIMSIFDPLGLLTPILIQAKVILQQVWRSGITWDQYLPDEEASQWALWLQRLRVSWACRVPRCYFEGVAGADIEIHTFCDASQDAYAAVSYFRFSLRDERVYTALVASKSRVTPLKPVSIPRLELQAALLGSRLAATIKKEHTLRPLRQVYWTDSRTVLAWIHSDAHNYKSFVSYRLSEIDELTDRAEWRWVPTVDNVADDATRSLDELTPEHRWFHGPDFLQQLEQEWPAQPTNVTASDEELLKTARATSSNIAATYATSIRERAVPDAARFSRWSRLTRAAGFVLLFIEKCRGRHIGGLERRHLDWAEIQLIQKSQEDAFGAELASMQAKQPLPRGSRLQHLSPYLDPSGTIRLRGRTSAAPGIPQHTAEPVIMCGRHRITRLLVLHYHVLAHHANHEAVINHLRQRYWVVHLRPTVRAVARQCQVCRLRTATPQTPPMGDLPAARLGHHHRPFTYCGVDYMGPFDVTVGRRHEKRYCALFTCLVTRAVHLEIAASLTTDSAICALRRMMARRGAPVEIYSDNGTNFHGADVELRRAWAELDLEKIKTFALTRGANWRFIPPAAPFMGGAWERLVGSVRRALRATLHQRAPTDEVLATLLAEAEHTVNARPLTHVSVHPADPEAITPNHFLLGSASGVATPGAFDDTDLVRRRQWRAAQRLADHFWERWVREYLPTLLPRPKQGEARPELRVGDLVVIVDAAQPRNVWPRGVIERVLPGRDGHVRVVEVRTVGGLLRRPAKRIVRLPVHEVVGDQPSTEGSSLFTAHPSRHPIVIIKDVGYADLRVLVDFMYYGEVNVTEDQLPRILDTARLLKIKGLTEMPDSTRHGSPGDGGAAEPGSPERRACGGKECEDGGGGAQWEQPAGSPASRDAQLKRKSPGDGGAAEPGSPERRACGGKECEDGGGAQWEQPAGSPASRDAQLKRKSPGDGGAAEPGSPERRACGGKECEDGGGGAQWEQPAGSPASRDAQLKRKSPGDGGAAEPGSPERRKTCDEPAGAAPEPAKELSAEAAAAAACVAEAAGRTALLQNCLPQQNGIYQLPEIAGVYSSVLAHRTESEDNSLRTSQHTYVDQNTAYNHQAMPWVNHGYVHTAEAFADRQEGVNFTPVSASEYSEAMPTPTAPASSDIPVDMQTQGEVPSQRPVETPGKRRRTSNPQAAENFQRAIEAVRFGGIGFCKAARIFGVNNRTLWLEYKKKGYPNHRPSIRERIKREPAEPPADAAEPAAVEDVQEIANAPQQPIGYMMNQTCFQYLQDNSLQGF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01042827;
90% Identity: iTF_01042827;
80% Identity: iTF_01042827;