Nswa008366.1
Basic Information
- Insect
- Nematopogon swammerdamellus
- Gene Symbol
- Mblk-1
- Assembly
- GCA_946902865.1
- Location
- CAMPPV010000253.1:753441-768137[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.6e-16 2.2e-12 47.3 0.0 1 39 226 265 226 268 0.95 2 2 5.5e-19 1.9e-15 57.2 0.0 1 43 463 506 463 508 0.95
Sequence Information
- Coding Sequence
- ATGATGGCGGCGCTGGCGGCACTCGGCAGCGGGCTGATGCCGCAGGCTGCACTCTCGCAGGCGTGGATCCTGCAGCGGCTGCAGCAGAACCAGATGTTACATCAACAGCAGCAGCACGTTGACAGAATCGACAAATCGCCCGTAACGAGCGTTCGCGGCGGAGCGGCGGCGGCGGCGGCGGCGTACCTCAGGGCTGCGCGCTCGGTCCGCCGCCATTTGAAATTTAAATACGGACGCTCCTCGGAATGCGCCGAACGAATCGTCGCCTCATTGTGCGAGTACCCCGCCGTCGCCGTCGCGGTGCCATGCCGCGGCTCCCCTAGATACGTGCGGCACAATAAAGTGATGTCGCGAGCGGGGCGGCTCACCGCAGACATGGGAGAGAAGGTGACGGTATCGAAATGCTCTCCGTCCTTCTCGGGCGGCGGTGGTGCGGGCTCGGGGGTGGGGGGTGGCAGCGGCGCCAGCGGACCGGAGCAGCCCCTGGACCTCAGCGCCCGCTCCGGATCCAGCACCGGAGAGCCGGCCACTCCGCCGCCCAGCGACATCAAGCTGCCGAGTCGAGTGCCGCCGATAGACCCCAAGTTCTTGGCTAATGTTCGAATGAAGCGGCCGGCGGAGGGTGTGTGCGGCGCGGTGGCGGGTGCGGGCGCGGGTGCCGGCCGGCGAGCCTACACCGAGGAGGAGCTGCAGAGCGCCCTGCGCGACATCCAGTCCGGCCGGCTCGGCACGCGCCGCGCCGCCGTCATCTACGGCATCCCGCGCTCCACGCTCCGCAACAAGGTATACAAGCTGGCGCTCGACCCGCCGCCAGACGCCGACCCCGAGCGCGACTCCGCCGACGACGACGACCACGACCCATTTTACCGTTCGCTTCTGCTGCAGGCGGCCGACCGCGACCCGCCCGCACGCGACGACGAGGACTCGCCCGGCGTCATCCTCAAGATACCGACCTTCCCGCCGCCCGAGCGCGACGAGACACCGCCGCCGGCCGCCGCCTCCCGCCTCCTCCCCGACCTGCCCTACGCCTCGCCGCTCGCCTACGCCTCGCCGCACGCGCACCCACCCCACGGCCCGCCCGGCGAGACCCTCTTCAGCCTGCGGGACGTGATCGCCAAGAGCATCAGCCAGAAGTTCCAGCAGCCTCCGGACGTGCGCCTGGAGCCGGAGCTCGGGTTCGCGCACCGCGCGCCGCCCGACCGACACATCTCCGTCATCAAGCACCTGCCGGACAACCCGCGCGCCGCCGCCTACCAGCACCAGCACCAGCACCAGCACCACGCCAACAGCGTCGGCGGCCGCGGCAACAACGGCGCGACGCCCTCCCAGGCGCAGCCCGCCGGCGGCAAGGGCACCCGGCCCAAGCGCGGCAAGTACCGCAACTACGACCGCGACAGCCTCGTGGAGGCCGTGAAGGCGGTGCAGCGCGGCGAGATGTCGGTGCACCGCGCCGGCTCCTACTACGGCGTGCCGCACTCCACGCTCGAGTACAAGGTGAAGGAGCGGCACCTCATGCGGCCGCGCAAGCGCGAGCTCAAGCAGCCGCCGCCGGACGCGAAGCCGCCGGCTCCGCCGAAGCCGCCGCCGCCGAAGCCGCACGCGAAGCCCGGCTTCCCGAACGGCATGAACGGGCCGGAGTCGCTCGGCGGCGCCGGCGCCGGCTCGCCGTACCCTCCCACCGGCTACCCGTTCTGGTCGCACTCGCCGGCGTTCCCGCTCGCCGGCGGCTCCTTCCCGCCCGGCGGCGACATGTTCGCCTCGCACATGATGCAGCGGCTGCGCGACGAGTCCGCCCCGCCGGCGCCGCCCGCCAACGGCTCCTCATTCCTCGAGGGCATCATCCGCTCGAGCCTCGAGCGGCCCGGCGCGCTGCTGCAGCGGCTAGCCGGGGAGCCGCCTCCGCCGCACGCCAACTCGCAGCGCACCAACGACGTGAGCGCGTTCAACGCGAAGGCGAACGCGAGCCTGCTGCAGCGGCTGACCGGCGACGGGGGCGCGTCGCCGGGCCCCGGCGCGAGTCTTCTGCAGCGGTTGACGAGCGAGTCGACGTCGGCGGGCGGCGGCTCGGACGAGGGCTCGCCGCCGCCGGCGCGCCGCCCGCGACTCTCCAGCTCGGACCGGCAGCTGGCCGTGGAGATGCGCGAGGCGGTGCAGCGGTTGCGGGCGGACAAGCTGCGCGCGGCGGGACGCAACGGCACGCCGACCCCGCCGGCGGCGGGCGCGCAGCCCGCGCCCGCCGACCGAGCTTAG
- Protein Sequence
- MMAALAALGSGLMPQAALSQAWILQRLQQNQMLHQQQQHVDRIDKSPVTSVRGGAAAAAAAYLRAARSVRRHLKFKYGRSSECAERIVASLCEYPAVAVAVPCRGSPRYVRHNKVMSRAGRLTADMGEKVTVSKCSPSFSGGGGAGSGVGGGSGASGPEQPLDLSARSGSSTGEPATPPPSDIKLPSRVPPIDPKFLANVRMKRPAEGVCGAVAGAGAGAGRRAYTEEELQSALRDIQSGRLGTRRAAVIYGIPRSTLRNKVYKLALDPPPDADPERDSADDDDHDPFYRSLLLQAADRDPPARDDEDSPGVILKIPTFPPPERDETPPPAAASRLLPDLPYASPLAYASPHAHPPHGPPGETLFSLRDVIAKSISQKFQQPPDVRLEPELGFAHRAPPDRHISVIKHLPDNPRAAAYQHQHQHQHHANSVGGRGNNGATPSQAQPAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRELKQPPPDAKPPAPPKPPPPKPHAKPGFPNGMNGPESLGGAGAGSPYPPTGYPFWSHSPAFPLAGGSFPPGGDMFASHMMQRLRDESAPPAPPANGSSFLEGIIRSSLERPGALLQRLAGEPPPPHANSQRTNDVSAFNAKANASLLQRLTGDGGASPGPGASLLQRLTSESTSAGGGSDEGSPPPARRPRLSSSDRQLAVEMREAVQRLRADKLRAAGRNGTPTPPAAGAQPAPADRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -