Nswa026248.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nematopogon swammerdamellus
Gene Symbol
ARID5B
Assembly
GCA_946902865.1
Location
CAMPPV010001136.1:24641-39245[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.6e-19 9.8e-16 58.8 0.0 3 89 283 365 281 365 0.92

Sequence Information

Coding Sequence
ATGCCCGTTCTCTCTCTCTCTTTCCAGGATGAGGTGCTCGCGATCAACGAGAAGGTGGTCGTGCGCGTGGGCGAGCTGCTCAGCTGGGTGTGGACCGGCGAGGAGTGGCGGTGGGGGCTGCCGGCCGTGTGGCGCGGCGCGTGCGCATCGCCGCCCGCGCAGCTCGACCCGCCGGAGCCGCTGCACGCGTCGCACCTCGACTTCGCAGACGTCGACAAGGAGAAGGCGACGCTCGGTGACTGGGTGTGGACCGGCGAGGAGTGGCGGTGGGGGCTGCCGGCCGTGTGGCGCGGCGCGTGCGCATCGCCGCCCGCGCAGCTCGACCCGCCGGAGCCGCTGCACGCGTCGCACCTCGACTTCGCAGACGTCGACAAGGAGAAGGCGACGCTCGAGGACCCCGAAGCTCCGGCTGTGGTGGTGTTCTCGTACCCCCGCTACTGCCGCTACCGCGCCCTCCTGCGCCGCCTCGAGGGGCTGCAGTCGGCGTGGCTGCGAGACTCCCTGGTCGCGGCGCTCGGCGGATACGCGGCGCCGACTAAACGCACCAGGATTCTGTTTTGCAAGGACACGTTCGAGTACCCCGAGCTGGAGGGTCACGAGTTCGTGTGCAACCACCTCGCGCCGCGGCTGAAGGGGAGGCCGCGCGGCCGCCGGCGGCGACGCGTCCGCTCGCACTCCGTCGACCCGCCCTCCGACCAGGACTCGGACACCTCCGTCTCCAGCGAGAGGGAGCGGGACAAGACAGAGTTGGCGCCGCCGGCGCGCGCGTCGCTGCGCAACGGCACCGGGCGGAGCGGCGTGGGCGCAGGCGCGGCGAGCGACAGCGCCGAGGAGCGCGCCACCGACCGCGCGTTCATGTCTCAGCTGCGCGCGTTCCACCGCGACCAAAGCACGCCGCTCAAGCACGCGCACAACCTCAAGGACCTGCGGCTGAGATCACTGTACCAGTCGGTGGTACAGCGCGGCGGGTACGAGCAGGTGTGCCGCGACAAGGGCTGGCGCACGCTGCACGGCGCGCTGCAGGGCCGGCCCGCCTCGCCGAGTCGCGCGGCACTCACGCGCAGGCACTACGAGAGAGTGCTGCTTCCGTTCGAAAAATACGAAAGGAGAAACGGCTCGAAATGGTGGAAGATGCCCAAGCTGCAGAACGGAACTAGCAAGGAACCGACATCTCCCAAGCAGGAGCGGAAGAAACTCCTCGACACTATGCCCATCACTACGATAGACATCACGGCCGAATCTCCCGTCAGAGAAATCGTAGACAAGCGTGAGACGTCAGTGCCGAGGCTACGAACTCCGTCCCCTAATCGCATCGACACTATAACACTCAATTCATCAGGCAATGATAGTCTGATTATCGACGAAAAGCCAAAAGACTCATACGACCCCTCAAACTTACTGACGAAAGACGAGAAAGACGATACCAAAGAACAGCACAAACCCGCAGCAGATCTCAACCAGGAATTCCTCGATTCGCTCCCTAAAGCGGAGAGTGAAAAAATCGAATCACCCATCAAAATCAGTGTCAAACCCGTCGAAAAACTGATCGAACGAAACACGCCACCTTCCGCTTACGTAGAAACCAATCAATCGTTTACAAACAAACTCCTAGGTACGCCCGGATTGACGGAATACCTCCACAAGCAAAGCCTGACGGACCTGAGTACGTCACTGCTAGAGATGGCGGCGAAGCAAAATTCTCAAACGCCCGCATCTCTCCTGGCCGACATCGCGAGCAAGCAGAGCTTCAACGAAATGAGCAACAGCTTACTCGCCGAGATCGCGGCGAAACAGACAATGGGGGATACGAATTTTTTCCGAGATTTGGCCGCGAAGAAAAGCATGGGCGAGATTAATACGAACTTCTTGGCGGAGATCGCGAAGGCGCAGCAAGACTTGCTGAGCTCTACAGCTTTGAGCAGCCTCGGCGGCCTGGGCGACAAGCTAGCGAACTATGCCACGCTTGCAGCCGCCGGACTGACGAACGGACAGTTGCCCAATGGGACCATGATTACAATGCAGCAAGCTTCAGATAAGCTGCAGAGTATGAGCGTTGGCGGAGGCGCCGGCGGCGGCGGCGGGGGCGGCGGGGCGGGGGCGGGGCGCACGGCGTCGCCGCCGTCGCGGCCCGCCGGCCGCAGCTCGCTGCGCTCGGTGCGCGTCAAGCCGACGCGCACCGCAAACACGGCGCCCCCTACACCGTGCGTGACGCCCCTCCGGCCGGACTCGGCGTCGCGCTCGCCGCCGGTGACGTCGTCTGCGCCCGCGCCGCCCGCCCTCACCAACTTCGGCATCAACTACGTCGGCGGCGGCGGCGGCGGCGGCGAGAGGAGCAACCACGTGACCTCCTCCACCGCCTCCTCCGCGGCCACCGCGCACGATCCCGCGCACCATTCCGACGACGAGATTATAGAGGTGCCCTACAAGCCCAAGACTCCCGAGATCATAGACCTGGACGACTACGAGTCCCCCGAGAGCCCGCAGGCCATCAAGAAGAAGAAACTCGACATCCTCAAGGAGAGAGGTCTCGAAGTCACCGCCGTATCGACAGACTGGCCGACGACTCCCGCGCCCGCGGCGTCGACCATCCCCGCGCCGGCTCTAGCGGCCGCCGTCCTACATCCCAACCCTATGCTAGGCCTCAATCCGGCGGTACAGCAACAGATCATGACGCAGGCGCAGTTCTTTCAAATGTACAACACTATCATGCCGCAGGGATACACAAACGGTCTGACCCCACCGAAAGTCATCCAAGGGAAATCGATTTACGGATCACCCGGGCCAGAAAAAACGGTCTACGGCAATCCGAAAGACCCATTTATGCCTCCACCGCATGTTCTTCAAGGGGCGCCACCTCAGAAGCATCCGAGATGCCTCCAACCGACCCCGCAAACACCCGGACCTGATATTCTCGATTTGAGCAGCAAGCAAGGCGTAGCTCCTCAAAAACCGGCCGTGGAGATTGTCAGGATACCGTCAGTTCCATCCCCTGCGAAGCCTATATCGAGTACAGCGCCCCAGAACCTTTCCTCAAAGAGTTATTCCCTCATAGATGGGAAAGCGGTGGTCGGATCAAATCTGGAAATAACACTAGTCGGTCCGAAAACGCCTCAACAGACTCCACCGAAAGTGCCCCGGCCTAGACAGAAACGCTCCTCGACCGGGCAGTTCATGTCGAATAAAACTCCGACTACAAGAGACAGTCCGAGCTACACCAAGTCCTACACATCGCCGTGCGGTCCCAACGTAGCGACGTCCACTTCAAGATCGCAGGACATGTACAAATCGGATAGGGCGAAGCAAGCGACGAATATAGTCATCCCTAACTATCAAATGTCTAATTCGAGCCGCGATAGCGATGTTTCACCGACTTCTTCGACTAGCAGTCGCGACGGCGGCGGTATAGCCGCTTTAACGTCCAGTCTCCTGCAAGTCGCCGGCGGTGCTTTGCTCCAAAACCCGGCCAAAGTTCCGCCGAACCTAGCGCAGATCATGGAGATGCAAGCCAAGAGCACGGCGCAAAGTTTAGCTTCCTTCATGGATCCGTCTGTGTACATGAGCGCGGTGTACAACAGTCTCGCCGGGCAGTTGACTCCTGGCCTGCCGGAGCAACAGCTCGCGATGTACCAGAATTTGATGTCGAGCCGACTAATGAGGAACTATCCGGGCCTTCTGAATATGAGCAGCGTGACATCTACACCGACAACGAAGAATTGA
Protein Sequence
MPVLSLSFQDEVLAINEKVVVRVGELLSWVWTGEEWRWGLPAVWRGACASPPAQLDPPEPLHASHLDFADVDKEKATLGDWVWTGEEWRWGLPAVWRGACASPPAQLDPPEPLHASHLDFADVDKEKATLEDPEAPAVVVFSYPRYCRYRALLRRLEGLQSAWLRDSLVAALGGYAAPTKRTRILFCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRRVRSHSVDPPSDQDSDTSVSSERERDKTELAPPARASLRNGTGRSGVGAGAASDSAEERATDRAFMSQLRAFHRDQSTPLKHAHNLKDLRLRSLYQSVVQRGGYEQVCRDKGWRTLHGALQGRPASPSRAALTRRHYERVLLPFEKYERRNGSKWWKMPKLQNGTSKEPTSPKQERKKLLDTMPITTIDITAESPVREIVDKRETSVPRLRTPSPNRIDTITLNSSGNDSLIIDEKPKDSYDPSNLLTKDEKDDTKEQHKPAADLNQEFLDSLPKAESEKIESPIKISVKPVEKLIERNTPPSAYVETNQSFTNKLLGTPGLTEYLHKQSLTDLSTSLLEMAAKQNSQTPASLLADIASKQSFNEMSNSLLAEIAAKQTMGDTNFFRDLAAKKSMGEINTNFLAEIAKAQQDLLSSTALSSLGGLGDKLANYATLAAAGLTNGQLPNGTMITMQQASDKLQSMSVGGGAGGGGGGGGAGAGRTASPPSRPAGRSSLRSVRVKPTRTANTAPPTPCVTPLRPDSASRSPPVTSSAPAPPALTNFGINYVGGGGGGGERSNHVTSSTASSAATAHDPAHHSDDEIIEVPYKPKTPEIIDLDDYESPESPQAIKKKKLDILKERGLEVTAVSTDWPTTPAPAASTIPAPALAAAVLHPNPMLGLNPAVQQQIMTQAQFFQMYNTIMPQGYTNGLTPPKVIQGKSIYGSPGPEKTVYGNPKDPFMPPPHVLQGAPPQKHPRCLQPTPQTPGPDILDLSSKQGVAPQKPAVEIVRIPSVPSPAKPISSTAPQNLSSKSYSLIDGKAVVGSNLEITLVGPKTPQQTPPKVPRPRQKRSSTGQFMSNKTPTTRDSPSYTKSYTSPCGPNVATSTSRSQDMYKSDRAKQATNIVIPNYQMSNSSRDSDVSPTSSTSSRDGGGIAALTSSLLQVAGGALLQNPAKVPPNLAQIMEMQAKSTAQSLASFMDPSVYMSAVYNSLAGQLTPGLPEQQLAMYQNLMSSRLMRNYPGLLNMSSVTSTPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-