Basic Information

Gene Symbol
Kdm5
Assembly
GCA_946902865.1
Location
CAMPPV010002138.1:25854-28343[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.2e-23 2.4e-19 70.4 0.0 4 89 119 200 117 200 0.92

Sequence Information

Coding Sequence
ATGGCCGACACGGTGGTGCCAGGCCGTTCGGACGCAAAGGACGTGCCCAGCATCGGGGATATCAAGGAGGGACCTAAATGCTCGGACATCCAAAAGCAGGCGATGCATCGCAGCGCCGAATTCTCGTTCGAGCCGCCGCCCGAAGCTCCCGTATTCGAGCCTTCGCTCGAGGAGTGGGCCGATCCGCTCGGCTACATCGCCAAGATACGCCCGATCGCCGAGCTCACGGGAATTTGTAAAATAAAGCCTCCTTCGCGCTGGCAGCCTCCGTTCGCCCTCGACATCGACAAACTCAGGTTTGTCCCGCGAATCCAAAAGGTGAACGAGTTGGAGGCGATAACGCGCCTCAAGCTGATCTTCCTCGAGAAGATCCTCAAGTTCTGGGAGCTGCAGGGCAGACCGCTCAAGATTCCAACCATCGACAACAAGCCGCTGGACCTGTACCTGCTGCACTTCTGGGTGAAGGAGGAGGGCGGCTTCGAAGCTTGTACGGCGGGCAAGAAGTGGAGGAAGATAGCCAACATCATGAACTACGGCCGAGGGCCGCCCACTATAGCTTTTCTGCGCAACCACTACGAGAAGATTCTCTTGCCCTACGACCTATTTGAGAACAGCAAGCCCAACATAAAGAGTGTGAAGAAATCTAAGCACAAGGTCGATGTAGATCACGATGATTTCGAAAGTATCGATATCTCCGACGAAGGCTCACCCAGTAAAATACCAAAATTGGAAGTCAAGGAAGAAACGGACGATACAGAGAAGCCTAAAAGTATTATAAAGAAAACCAAAACAGGCACGGAGATAAAGGGTGAAACCGAGTCAGAAAAGTGCAGCAGGGAGATGAAGAAACTGAAAACTTACGGGGCCGGTCCAAAAATGCCAGGGGTCAACGACGAGGAGTTTGACATAACAAAATGCAGAAAGAGACCTAAAATGGACCTAGATCCTCTGGCCACATACGAGTGTACGATCTGCAACAGGACGCACCGAGATGATGTGATGCTGATCTGCAACGGCTGCTCGTACACGTACCACACGTTCTGCTTGACTCCGCCGCTGAGCGCGGTACCGGACGGGGACTGGCGCTGCCCGAGTTGCATCGCGGAGGAGGTGCTCAAGCCCACAGAGGCGTTCGGCTTCGCTCAGGCCGAGAACGAGTATACACTGCAGGAGTTCGGCGAGATGGCGGACAGGTTCAAGTCCAACTACTTCGGCATGTCGGGCCACCTGGTTCACACTACCACCGCCGAGCAGGAGTTCTGGAGGATCATCTCATCTGTAGAGGAGGAGGTGACGGTCGAATACGGTGCGGATCTACACTCGATGGATCACGGCTCCGGCTTTCCCACTAAGTCTTCCATCAACCTGCATCCCGGCGACCAGGAGTACGTAGACTCGGGATGGAATTTGAACAACTTGCCGGTGATGGACGGCTCCGTACTGAGATTTATAAATGCCGACATATCCGGCATGACGGTCCCGTGGATGTACGTGGGGATGTGCTTTGCTGCCTTTTGTTGGCACAACGAGGATCACTGGAGCTACTCCATCAATTATCTGCATTGGGGCGAAGCCAAGACCTGGTACGGGGTTCCCGGGAGCGGGGCGGAGCTTCTGGAGAACACAATGAAAGCCGCCGCTCCGGACCTTTTCAAATCTCAACCAGACCTGCTGCACCAGCTTGTGACCATCATGAATCCCAATATTTTGATGAAGGCCAACGTACCGATATACAGAACCGATCAAAACGCCGGTGAATTTGTCGTTACCTTCCCTCGGGCGTATCACACTGGCTTCAATCAAGGCTACAATTTCGCCGAAGCTGTCAATTTCGCTCCACCGGACTGGCTCCCCATCGGCCGCGATTGCATTCAGCACTACAAGAAACTGAAAAGGTTCTGCGTGTTCTCTCACGACGAGTTAATTTGTAAGATGGCTTTAGAGGGTGATCGTTTGGATTTAGCGACCGCTTTGGAGACACAAAAGGAACTGGTGCACGCAACAAAGGAGGAGGGATGCCTGCGGGAAGGACTGAAGGCGAGAGGTATTAAGAGTGTCCGGCGAACCGCATTCGAGCTGCTGGGCGACGACGAGCGCCTGTGCGAGATCTGCAAGACGACATGCTTCCTATCTTCTGTATTTTGTGCCAACTGCAAGCACATGGCTTGCCTAGCGCACGCGGACGTAGTCTGCAAGTGCACCATCGATAAGTTAACCCTCAACTACCGATACGACATGGACGAGCTGCACATAATGCTGCAGAGTCTCGACTATCGGGTGAGCAGTTTCGATAGATGGATAAAGGATACGAAGAAGGCGCTACTGGCCGCCGCGTCGGAGTTTGGGAGAGTCCAAAAATTGAAAAATCTGGTGGATAACGCGGACGAGCTGAGAATACCAAAGTGTGCTCTGCTGACTCGGCTGAGAGATGAATACACGAAAGTGAGCGAGAATGATGAGGTCGTAATTATAGACCTCGATGACGACTAA
Protein Sequence
MADTVVPGRSDAKDVPSIGDIKEGPKCSDIQKQAMHRSAEFSFEPPPEAPVFEPSLEEWADPLGYIAKIRPIAELTGICKIKPPSRWQPPFALDIDKLRFVPRIQKVNELEAITRLKLIFLEKILKFWELQGRPLKIPTIDNKPLDLYLLHFWVKEEGGFEACTAGKKWRKIANIMNYGRGPPTIAFLRNHYEKILLPYDLFENSKPNIKSVKKSKHKVDVDHDDFESIDISDEGSPSKIPKLEVKEETDDTEKPKSIIKKTKTGTEIKGETESEKCSREMKKLKTYGAGPKMPGVNDEEFDITKCRKRPKMDLDPLATYECTICNRTHRDDVMLICNGCSYTYHTFCLTPPLSAVPDGDWRCPSCIAEEVLKPTEAFGFAQAENEYTLQEFGEMADRFKSNYFGMSGHLVHTTTAEQEFWRIISSVEEEVTVEYGADLHSMDHGSGFPTKSSINLHPGDQEYVDSGWNLNNLPVMDGSVLRFINADISGMTVPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEAKTWYGVPGSGAELLENTMKAAAPDLFKSQPDLLHQLVTIMNPNILMKANVPIYRTDQNAGEFVVTFPRAYHTGFNQGYNFAEAVNFAPPDWLPIGRDCIQHYKKLKRFCVFSHDELICKMALEGDRLDLATALETQKELVHATKEEGCLREGLKARGIKSVRRTAFELLGDDERLCEICKTTCFLSSVFCANCKHMACLAHADVVCKCTIDKLTLNYRYDMDELHIMLQSLDYRVSSFDRWIKDTKKALLAAASEFGRVQKLKNLVDNADELRIPKCALLTRLRDEYTKVSENDEVVIIDLDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-