Nkoe013795.1
Basic Information
- Insect
- Nemapogon koenigi
- Gene Symbol
- stc
- Assembly
- GCA_963924495.1
- Location
- OZ004643.1:10088961-10103355[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.61 8.1e+03 -2.5 0.6 14 19 365 370 360 370 0.72 2 14 0.054 7.2e+02 0.9 0.7 2 10 397 405 397 405 0.90 3 14 0.00033 4.4 8.0 19.0 3 19 412 428 411 428 0.93 4 14 4.2e-07 0.0056 17.2 12.8 1 19 464 482 464 482 0.94 5 14 1.3 1.8e+04 -3.5 1.6 7 11 486 490 486 492 0.85 6 14 5.2e-06 0.07 13.7 14.4 1 18 523 540 523 541 0.98 7 14 2.5e-07 0.0034 17.9 13.1 1 19 582 604 582 604 0.85 8 14 2 2.7e+04 -5.1 2.2 6 10 634 638 634 638 0.94 9 14 0.0031 42 4.9 7.6 1 11 644 654 644 656 0.95 10 14 0.0001 1.4 9.6 12.0 3 19 673 689 665 689 0.87 11 14 0.1 1.4e+03 -0.0 17.6 1 18 728 744 728 745 0.81 12 14 1.1 1.5e+04 -3.3 1.3 8 13 750 755 749 756 0.80 13 14 2.6e-08 0.00035 21.1 13.7 1 17 781 799 781 805 0.83 14 14 0.0038 50 4.6 10.2 1 14 811 823 811 836 0.85
Sequence Information
- Coding Sequence
- ATGTCTAACTGGAATAATACTTATTCATACAATTCCTCACAACATGAGGAACAAAGCGCATGGCAAGCTGATCAAAATATACAGTATTTGGAACAGGGGTCAAACCATTACCCTAACCAACAATATTCCCAAAATGGTCAATATGTTTCTTTTAATGAATTTTTATCACAAATCCAACCAAATGGAGCAGGCCCTAGTGATAACTATCAATACCAAAATTATAGAGGTCAATTAAATTATCCTGGTGTGTCTAATCAGAATCCAAGCCAATTAAATCATATGTATGATGCACCAAGTAACAACCAGCCTAATGTACAGAACCAGGCTGCACCTGTTCAATCTGATACGAGCCATACTTATGATGAGGAAACTGTTTCCAAGTCCAAACTAACTGCCACTGCTACAGAATTTGTTCCTAAAAGTTCACAAAATCAAAAAGTAACAAATAATGTAGAACCATCCACATCAAAACATGATAAACCTAGATACGAAACAAATGAAAGGGTAcattcaaaaaaagaaggaaatcTACCAAGCAGAAGTCATCATGAAGTAAATGGCCATCCCGGGGCCTCTAGACAACCTTATGAAAATAATAGGAATCCGAGAAAATACAGTTCTAGACCAAGTGCAAGAGAACATGATGCGGGCCGTACATTTTACAATAGCAAATCCAGCCAAGATGTAAGAAATGGTGGTAAGTTTTATGATACTGGAAATAACAGAAATAGGAACTGGCCTGGATCCCAGAGAATACGCATATCAGACAGAAACACTGCGGAAGATGAAcaatatgcaaataattattatcaacaTAGTAAAGATGATAAGGAAGAGAAAATAGATAAAACCCCCAAAACTCACTTTAGTCCAATGAGGAATAAGAGTAAACCTAATTCAGAaaaaaATAAAGAATTGACACAGAGGGAGCGACTCAGTGAACAGCTTGACAAAGGTGGGCTGGAGTGTCTGGTGTGCTGTGAGAGAGAGAAACAGTTTGAGGCTGTGTGGTCCTGTGGTACTTGCTACCATGTATTCCATCTGCGATGCATCAAGAAATGGGCTAAGAGCAGCTTACATGAGGGAAAATGGCGATGCCCTGCCTGCCAAACCTCCGAAGAGAACGTCCCCGTCGACTACTTTTGCATGTGCGGCGCCATCCGCGACCCGGAGAATCAATACGGTATTGGGGCCCACACTTGTGGGATGCCCTGCAGCCGCACCCGCTCCTGTCATCATCCGTGCACACTGCTCTGCCATCCGGGACCTTGTCCGCAGTGCCAGGCTACTGTTGAAAAaTGCTGCGGTTGCGGTGCGGAGAAGCGCTCCGTATTGTGCAGCAGTAAGTTAGACCAGGTGTGCGGCAGGACGTGCGACAAGCAACTTTCGTGCACCTTACATCGCTGCAAGCAGTCTTGTCACGAAGGGCCCTGTGATGAGTGCAAGGAGGCTGTCAAACAAGTGTGCCACTGTCCCGCTGGTAAGAGTCGCGAGATCCCCTGCACCCGCTCGACGGCGGACGAGTCGCACTTTGCATGCGGAGACGCGTGCGGACGCGTGCTGTCGTGCGGCGCGCACGTGTGTCGACAGCTGTGCCACCCGCCGCCGTGCCCGCCGTGCGCGTTGTTGCCGGAAAACGTGCTCTTGTGTCCCTGTGGACATACCAAaatagaCAAAGACCAACGTAAATTGTGCACGGACCCCATCCCGCTTTGCGGTAACATTTGTGCTAAACCGCTCGCCTGCGGACTGGCCGGTGACGAGCATTTCTGCAAACAGGAATGTCATGAAGGTCCCTGTCCCCCGTGCCCTGATAAGACCGTGGTAAACTGCCGCTGCGGCCACACTAACATGGAAGTACCGTGCTCGGAGCTTTCTCAGAAGATTGGCAATATATTCTGTCAGAAAAAATGTAACAAGAAGCTGGGATGCGGCCGTCACCGTTGTCGCGAGCGATGTTGCGCGACTGACACCCACGAATGTTTAGCGATGTGCGGTCGACTGCTCACATGTCAGACTCATCGCTGCGAGATGTTGTGTCACATGGGTCACTGTTCACGGTGTCCAATTTACGTGTGGGAGGAGATATCGTGTGAGTGCGGTCAGGAGGTGCTGTTCCCGCCGGTACCGTGTGGAGCGCGCGCGCCCCCGTGCTCCAGCGATTGCACAAGAACGCGCCCTTGCGGCCACCCGCCACATCACTCATGCCATACTGGGGAGTGTCCCCCGTGTGTGGTGCAAACTACGAAGAGCTGTCATGGTGGTCATGAGGAAAGAAAAACTATACTCTGTTCCCAAGAAGACTTCTCGTGCGGTTTGCCGTGTGGTAAGCCGTTACACTGTGGGAAACATACCTGTATCAAAACATGTCATAAGGGACCCTGTGACACAGAGAAATGTACTCAACCGTGTCAAGAGAAGCGGCCATCTTGCGGTCACCCTTGCGGTGCGGTTTGCCACGCGGGTGAGGGAGCGAGCCCCGTCTGTCCGTCGAGCACGCCGTGTCGACGTCTCGTGAACGCTACGTGCTCGTGTCGGCGACGTGTACAGCAGCGATCATGTGCGGAAAACGCCAGAGATCTCTCCAAAATATTGAACACCCTAGCTGCAGTTAAGATACAAGAAGGTGGCGGCACCGTCGACCTGGCAGAAGTCACTCGTCCTCTCAACAGCCTAAAAACGCTAGAATGCGACGACGAATGCCGCCTGGAAGCCCGCACGCGACAGATGGCGCTCGCTCTGCAGATCCGCAACCCGGATGTGTCGTCCAAGTTGGCCCCGAGGTATAGTGACCACGTGCGGCAGTGGGCCACCAGGGACCCGACGTTCGCGCAGCACATACACAACAAAATGACCGAGCTGGTGCAGCTCGCTAAGAAGTCCAAACAGAAGACCCGTTCTCACTCGTTCCCCTCCATGAACTGGCAGAAGCGACAATTCATTCACGAGTTGTGCGAGCACTTCGGCTGTGAGAGCGTTGCATACGATGCGGAGCCTAACAGGAATGTAGTTGCCACCGCTGACAAGGAAAAGTCATGGTTGCCTGCTATGAGCGTGTTGGAAGTGCTAAGCCGGGAGGCGGGGAAACGTCGTGTGCCGCCACCTATGATGCGGGCTACCATCGCGCCTGCTACCACCGCCGCACCGGCCAGTAGCAACACCGCTGCAACCTCCACAAGATCAACAACCGGGTGGGCGTCTTCGGCTAACTCGTGGGCAGCGCGCACTCAACAAAAACCGAAACCTTCCGAGCCTCCTAAACGTCCGGTTATAGATTATTTCGACAATCCCCCTGAGGACTAA
- Protein Sequence
- MSNWNNTYSYNSSQHEEQSAWQADQNIQYLEQGSNHYPNQQYSQNGQYVSFNEFLSQIQPNGAGPSDNYQYQNYRGQLNYPGVSNQNPSQLNHMYDAPSNNQPNVQNQAAPVQSDTSHTYDEETVSKSKLTATATEFVPKSSQNQKVTNNVEPSTSKHDKPRYETNERVHSKKEGNLPSRSHHEVNGHPGASRQPYENNRNPRKYSSRPSAREHDAGRTFYNSKSSQDVRNGGKFYDTGNNRNRNWPGSQRIRISDRNTAEDEQYANNYYQHSKDDKEEKIDKTPKTHFSPMRNKSKPNSEKNKELTQRERLSEQLDKGGLECLVCCEREKQFEAVWSCGTCYHVFHLRCIKKWAKSSLHEGKWRCPACQTSEENVPVDYFCMCGAIRDPENQYGIGAHTCGMPCSRTRSCHHPCTLLCHPGPCPQCQATVEKCCGCGAEKRSVLCSSKLDQVCGRTCDKQLSCTLHRCKQSCHEGPCDECKEAVKQVCHCPAGKSREIPCTRSTADESHFACGDACGRVLSCGAHVCRQLCHPPPCPPCALLPENVLLCPCGHTKIDKDQRKLCTDPIPLCGNICAKPLACGLAGDEHFCKQECHEGPCPPCPDKTVVNCRCGHTNMEVPCSELSQKIGNIFCQKKCNKKLGCGRHRCRERCCATDTHECLAMCGRLLTCQTHRCEMLCHMGHCSRCPIYVWEEISCECGQEVLFPPVPCGARAPPCSSDCTRTRPCGHPPHHSCHTGECPPCVVQTTKSCHGGHEERKTILCSQEDFSCGLPCGKPLHCGKHTCIKTCHKGPCDTEKCTQPCQEKRPSCGHPCGAVCHAGEGASPVCPSSTPCRRLVNATCSCRRRVQQRSCAENARDLSKILNTLAAVKIQEGGGTVDLAEVTRPLNSLKTLECDDECRLEARTRQMALALQIRNPDVSSKLAPRYSDHVRQWATRDPTFAQHIHNKMTELVQLAKKSKQKTRSHSFPSMNWQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLSREAGKRRVPPPMMRATIAPATTAAPASSNTAATSTRSTTGWASSANSWAARTQQKPKPSEPPKRPVIDYFDNPPED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -