Nkoe020661.1
Basic Information
- Insect
- Nemapogon koenigi
- Gene Symbol
- nfxl1_1
- Assembly
- GCA_963924495.1
- Location
- OZ004653.1:8371068-8373536[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 2.7e+04 -7.8 5.6 15 19 127 131 126 131 0.81 2 19 0.065 8.6e+02 0.7 0.4 4 10 162 168 161 168 0.96 3 19 0.0014 19 6.0 11.5 3 18 179 194 178 195 0.94 4 19 2 2.6e+04 -4.1 0.8 1 8 220 226 220 227 0.50 5 19 1.6e-08 0.00021 21.8 12.0 1 19 230 248 230 248 0.93 6 19 1.3 1.7e+04 -3.5 1.8 6 10 273 277 272 277 0.89 7 19 2.8e-09 3.8e-05 24.2 10.8 1 19 283 301 283 301 0.99 8 19 1.9e-06 0.025 15.2 19.6 1 19 337 354 330 354 0.90 9 19 0.22 2.9e+03 -1.1 0.6 1 5 363 367 363 372 0.84 10 19 0.00018 2.4 8.9 17.5 1 18 388 405 388 406 0.94 11 19 3.5e-10 4.7e-06 27.1 11.9 1 19 415 433 415 433 0.97 12 19 1 1.3e+04 -3.2 2.1 5 10 441 446 441 446 0.92 13 19 0.00061 8.2 7.1 9.5 7 18 479 490 472 491 0.85 14 19 0.0023 31 5.3 7.7 1 12 501 511 501 511 0.97 15 19 0.25 3.3e+03 -1.2 3.4 14 19 540 545 540 545 0.87 16 19 0.14 1.9e+03 -0.5 0.5 8 12 561 565 560 572 0.79 17 19 7.9e-05 1.1 10.0 2.9 1 11 581 591 581 592 0.97 18 19 0.0035 47 4.7 13.3 4 18 623 638 621 639 0.86 19 19 1.2e-06 0.016 15.7 13.0 1 18 680 698 680 699 0.89
Sequence Information
- Coding Sequence
- ATGTCGAGACGATACCAGGACGCCGCTGCTAAATTGCAGCAAAGTGTCCAAAAGCATTTAAAGGAGGCACCGGATTTATCATCTTCCGAAGATGATGAGCCTTTAGCTGGAAGTATTTTGGAAGATACTCTTCGTAGATACCGTGACGGAGGCGATACCCGTCTTAGAGCGTTTCTAGAAGATGCCATCACCGGCCGGTCTACCTGTCTAATATGTATCAGTTCTGTTCGTCGCGAACATCCCATCTGGTCGTGCGACCACTGCTACTCTCACTTCCATCTCTCTTGTATACAGAAATGGGCTAACGATAGTTTATCGTTACGAGAAAACGATACGACAACGGTCGCTGTCGTTCGTCCACCTAAAATAGAATGGTGCTGTCCGAAATGTCGCACTTCATACAACAAAGATGAAGTTCCGCAGAGGTATAGATGTTTCTGTACCAAATTAAGTGATCCACCGTTTCATCCGTGGCTGATACCTCACTCGTGCGGTGAGGTTTGTCAGAAGAGACTGTCTTTAGGACAAGGATGCAAGCACATCTGTATGCTGCTCTGTCACCCGAAGCAGTGTCCTCCATGTGCGCAGACTGTGAATGCACCATGCTATTGTGGAGATGAAACTAAGAAATTAAGATGCAGCTCATCTAAATGGTCTTGCGGTAAAACTTGTAAACAACTCCTGTCTTGTAATTCACACAAATGTGAAGAAGTTTGCCATGACGGGGCCTGTCCACAGTGTAGTTATACAAGTTTGCAGACATGCGAGTGTGGCAGGGAAAAGCAGAAACGACCATGCAATGATACTAAATGGCAATGTAAGAAAGTCTGCAGTAGTCCTTATTCATGTGGATATCACAATTGTGAAAAGGTTTGTCATTTTGGAGAATGCGGCTCTTGTCCTAATTCAGGCACACGCTCATGTCCATGCGGAGCTAACCAGAGATATGTCCAGTGTCCAGATATCATGGAGACTTGTATGGGTACTTGTGGAAAGAATCATGATGAATGCAGTCATAACTGTCCAGAAAAATGTCACAGAGGCCCGTGCCCCCCTTGTCAAGTGTTAGTGGAAAAGAATTGTCATTGTGGAACTCACACTCGTCCAATGCCATGCAGCCGTGACTTTAAATGTGATACAAAATGTAGAGGGATCCGTCCGTGCAACAAACACAACTGTGGCAGAAAATGTTGCAATGGTAACTGTCCTCCATGTGAAAAAGTGTGTGACAAACCTCTCCAATGCGGTCGCCACAAATGCACCATGGTGTGTCACTCGGGCCCATGCTACCCGTGTACTCGGGAGTCCAAAATAGTGTGTCGATGCAAACAAACCTGTATCCTGGTGGTGTGTGGCAGAGAGAAGCACACTAAACCTCCAAAATGTTGCTTACTCTGCAAATTGAAGTATAAATGTGGGCACACAGACGAAAATCAACATACTTGCCATTTTGGTGACTGTCCACCATGTGAAGCCTTCTGTAAAAAGCAATATGAAACCTGCGGCCATGAATGTATATCTAAATGTCACAAGTCAGTGGCAGTTGTGTTCCAACAAGTGGACAAACCAGCCACACCGTGGGAAGTGCAGCCTCCAAAAACCAAAATAATGGCCCTAGATTGCCCTCCTTGTACTGCTAAGGTTATGGTACAATGTTATGGTAGACATGAAACTGTAAGTCAAGTTTGTCATGAAGCTCAGAAGAGACCGTGTGGTAGGGAATGTGGAAGAGCTCTTGATTGTGGAAATCACTTGTGTGCTATGCTCTGCCATTTGTATTCACGGGATCCTAAATACCCTAATGTACCTTCAGAATGCGAACAATGTGTTAAAGAATGTGAGGTACCTCGCCCTGCAAACTGCACCCACAAATGCTCCCTGCAAAATTGCCACCCTGGTGAATGTCCTCGATGTGACATTCTACAGAAGATCAAATGCCACTGTGGTTTGACAGATAAATATATTAGATGCCACCAACTGGCAAAGGTGACAGAAGAAATGTTGTCTTGTAACCAGCAATGCCCTAAAAACTTGGAATGTGGCCACAGATGTAAGAACCTGTGCCACAGTGGAGATTGCAAGGGACAAGAATGTACCAAGAAGTTGAAAACCTACTGTGATTGTGGGAACATCAGGAAAGAGTTGACATGCAATTTGGTCAGAAGTGGGAACGCTAAAGTGCCCTGTGATGACAGTTGTGAAGTGAAGAAGCAAGCTGCtcaaatagagaaagaaaaagaagagaAGAGACAGAAGGTGttggaagaagaaaaaaacaaaagagaATTGGAAGAGTATGCATGGAAGTTTGAGAAGAAAAAGAAGCACAAGGAAAAGAAAGTTAGGGTGCTTAAAGATGATAGgagttttttcaaaaaatattggatatCTGTATATACATCTGTACTTGTACTTGTGATTGCTGTAATTTCCTATATAGTCCTTAACGAATTTGTTAATGTTAATTAA
- Protein Sequence
- MSRRYQDAAAKLQQSVQKHLKEAPDLSSSEDDEPLAGSILEDTLRRYRDGGDTRLRAFLEDAITGRSTCLICISSVRREHPIWSCDHCYSHFHLSCIQKWANDSLSLRENDTTTVAVVRPPKIEWCCPKCRTSYNKDEVPQRYRCFCTKLSDPPFHPWLIPHSCGEVCQKRLSLGQGCKHICMLLCHPKQCPPCAQTVNAPCYCGDETKKLRCSSSKWSCGKTCKQLLSCNSHKCEEVCHDGACPQCSYTSLQTCECGREKQKRPCNDTKWQCKKVCSSPYSCGYHNCEKVCHFGECGSCPNSGTRSCPCGANQRYVQCPDIMETCMGTCGKNHDECSHNCPEKCHRGPCPPCQVLVEKNCHCGTHTRPMPCSRDFKCDTKCRGIRPCNKHNCGRKCCNGNCPPCEKVCDKPLQCGRHKCTMVCHSGPCYPCTRESKIVCRCKQTCILVVCGREKHTKPPKCCLLCKLKYKCGHTDENQHTCHFGDCPPCEAFCKKQYETCGHECISKCHKSVAVVFQQVDKPATPWEVQPPKTKIMALDCPPCTAKVMVQCYGRHETVSQVCHEAQKRPCGRECGRALDCGNHLCAMLCHLYSRDPKYPNVPSECEQCVKECEVPRPANCTHKCSLQNCHPGECPRCDILQKIKCHCGLTDKYIRCHQLAKVTEEMLSCNQQCPKNLECGHRCKNLCHSGDCKGQECTKKLKTYCDCGNIRKELTCNLVRSGNAKVPCDDSCEVKKQAAQIEKEKEEKRQKVLEEEKNKRELEEYAWKFEKKKKHKEKKVRVLKDDRSFFKKYWISVYTSVLVLVIAVISYIVLNEFVNVN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -