Basic Information

Insect: Nemapogon koenigi
Gene Symbol: -
Assembly: GCA_963924495.1
Location: OZ004631.1:11354464-11362302[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 7.6 5.3e+02 2.0 0.6 1 23 38 61 38 61 0.92

2 19 0.13 8.7 7.6 4.6 1 23 68 91 68 91 0.97

3 19 1.4 97 4.3 5.4 1 23 134 156 134 156 0.97

4 19 0.23 16 6.7 0.6 2 23 162 183 161 183 0.95

5 19 1.4 96 4.3 3.6 2 22 443 463 442 463 0.94

6 19 2.8 1.9e+02 3.3 1.0 1 23 559 581 559 581 0.82

7 19 0.25 17 6.6 0.3 2 23 714 735 713 735 0.96

8 19 0.046 3.2 9.0 0.7 3 23 819 839 818 839 0.97

9 19 0.22 15 6.8 0.8 1 23 847 869 847 869 0.97

10 19 0.14 9.5 7.5 3.4 1 23 898 920 898 920 0.95

11 19 0.023 1.6 9.9 4.9 1 23 928 950 928 950 0.99

12 19 0.14 9.8 7.4 3.2 1 23 1030 1052 1030 1052 0.97

13 19 0.0067 0.47 11.6 1.7 1 23 1107 1129 1107 1129 0.94

14 19 0.47 33 5.8 0.8 2 23 1136 1157 1135 1157 0.96

15 19 0.0018 0.13 13.4 0.2 1 23 1222 1244 1222 1244 0.96

16 19 0.0012 0.087 13.9 1.6 1 23 1250 1272 1250 1272 0.94

17 19 0.0075 0.52 11.4 2.5 1 23 1362 1384 1362 1384 0.97

18 19 9.9e-05 0.0069 17.3 1.2 1 23 1390 1412 1390 1412 0.99

19 19 0.004 0.28 12.3 2.1 1 23 1536 1558 1536 1558 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	7.6	5.3e+02	2.0	0.6	1	23	38	61	38	61	0.92
2	19	0.13	8.7	7.6	4.6	1	23	68	91	68	91	0.97
3	19	1.4	97	4.3	5.4	1	23	134	156	134	156	0.97
4	19	0.23	16	6.7	0.6	2	23	162	183	161	183	0.95
5	19	1.4	96	4.3	3.6	2	22	443	463	442	463	0.94
6	19	2.8	1.9e+02	3.3	1.0	1	23	559	581	559	581	0.82
7	19	0.25	17	6.6	0.3	2	23	714	735	713	735	0.96
8	19	0.046	3.2	9.0	0.7	3	23	819	839	818	839	0.97
9	19	0.22	15	6.8	0.8	1	23	847	869	847	869	0.97
10	19	0.14	9.5	7.5	3.4	1	23	898	920	898	920	0.95
11	19	0.023	1.6	9.9	4.9	1	23	928	950	928	950	0.99
12	19	0.14	9.8	7.4	3.2	1	23	1030	1052	1030	1052	0.97
13	19	0.0067	0.47	11.6	1.7	1	23	1107	1129	1107	1129	0.94
14	19	0.47	33	5.8	0.8	2	23	1136	1157	1135	1157	0.96
15	19	0.0018	0.13	13.4	0.2	1	23	1222	1244	1222	1244	0.96
16	19	0.0012	0.087	13.9	1.6	1	23	1250	1272	1250	1272	0.94
17	19	0.0075	0.52	11.4	2.5	1	23	1362	1384	1362	1384	0.97
18	19	9.9e-05	0.0069	17.3	1.2	1	23	1390	1412	1390	1412	0.99
19	19	0.004	0.28	12.3	2.1	1	23	1536	1558	1536	1558	0.98

Sequence Information

Coding Sequence: ATGCTGCGGCGCACCCCGCCGCCCGCGCCCGCCCTCGCGCCCGACGGCACGGCCTCCTCCGAAGTCTCATCGGACGACGCCGAGCTCCCGCAGTGCAAGATTCGTCGCAACTACACCTGCTCCAAGTGCGCCTTCTACACCCAAAACCCGCGCGCCTTCCTCACACACGCGCGCGACGTGCACTACGAGAAGTTCAAGATCTACGACTGTCCACACTGCGTGTACGCCTCGCGTCACCACCAGAAGCTGATGCGTCACGAGAGGATGGTGCACGGTccggccgccgccgccgccgcgcgCGCTGTCGACCTGTCCGATACCGAGGATCTGCTGGAAGAGGTCGAGGACGCGCCCGAGCCGCCCCCCACTACCGGCTCCGCCGACCGCAAGTCAAAGTTCTTCTCGTGCGAAAAATGTAACTATGTGACGCACCTCAAGTCTCGCTTCACGAAGCACGTGAAGTACCACTCGATGCCGATGATCAAGTGCGCGCTGTGCGACTTCCGCACACCGTACAAGTGGAACCTGGACCGGCACAACAAGAACCACGGCGGCGGCGGCGCGTTCTGCTGCTGCGTGTGTAACTTCACGGCGGACATCAAGCAGAGCCTCACTGTGCACGAGATGAATCACCACACTCCGCCTGCCGGTGTGGGACACTCGGCCACCACACGTCGCCGCAGCCGGCCGCCCGCTGCCACCGCGGCGCGCCTCACTTTGCTAGCCTCACTCGCGCTCGACGAGGGGAGCGGAGACTCGCTGTCGTTgtcgGAAGTGGGGTCACAACAATCAGAAATGTCTGAAATGTATAATAATGACTCTAACGACATGATTATTGAAGTGACAAATAAAGACGAACCAAGTCAGGATCGAGTACAAAGTTTTAATCATATAGACGACATGATACAGCCAAATAGAAAGAGAGCAAGGCCGATGCCACAGCTCATTCCTTTAAATACATCTACGCCAGTTCAAGGCAAGAGTTCGTATGAACCTTCACCAAAGAGTTTTAAGGAAGGCGCAACTTTATCAGAAACTGAATACGgacaaaaattaaatgaattacCTGCAGATATGTCATTTGTACCAGTTAATACAACGTCATCAATTAAAGGCGATTATCCACCTAAGAAGAAAAACGAATCCTTCTTTGACAAATTAAAGCAGAGATTGCTCAATGAATCGGGCAAAGAGGGTTCTCTCACATGTAAAAACTGTGGGTTTGAAAGTAAATGTTTGTCCGAACATTCGGTCCACGAGAAAACTTGCTCGTCAACCACTAGTCGTGTAGTAGCTAACGCGACCGTCAGTAACACTGGTTCTACAAGATGCCAGAATTGTAGACACAGGTGTAAGTCTAGTGCTGATTTATATCTTCACTTGCAAACATGcactgtaaataataaaatttatcctGAAAATAATACTAAATCACGAAATGATTCTAGTGTTAAAGAAAAGGAAGGCGAGCCACATCCGATGGAAAATGTTGTATTTGTTTGGAATAATATTAATACAGAATCTAACAAATTTGAGACACCTCTAGACATCAATATCAATGATGATTCCACAATAGCAAGAGGTGATCGTCATTATGATCCTAATAACGTAGACGCGTTACATGATGACGAAGGAATGAGTTTGTCACCCACACAGGCCGTGGGAAAGAGGGTTTACAAGTGTCCTCACTGTCCATTCTGGGCTTCTACAGCCTCCAGATTTCACGTTCACATTGTTGGACACTTGAATAAGAAGCCATTTGAGTGTTCTTTATGTCAGTACAAATCTAATTGGCGGTGGGATATAACCAAACATATAAAATTGAAGTCAGCCAGAGATCCTGACCACAACGAAGCTAAAGTATTGATGACAGACGAGACAGGAAGACGGAACTATAGTAAATACCAGAAATTTTTGGCCATGCTCACCCTCAATGATAATGGGGAAAACGTTTTTCAATATATTGATGAGAATACCACGACAATCGAAATTTCGATGGAGGTAGATGAGCCACACAATGGATTTTCAAACGAAAGCAGCATGTCACCAAACGTACAGCCGCTAAACCTACAAACTAAACAACAAAAGGACTCTGACACTAATAGTGATGAGACGAAGAAACCAAAAAGGACACTTTGGAAgtgtaaaaaatgtaattacagGGACCCATCAAAGGAAGCACTGTTGGAACATATTCGTGATCACGCCAAAACCTTTGATGATAATCACGAGGACTCGAAACTAACTAAGAAATCTGAACTCTCCAAAGATCCTGCAGATTTAGCGTACCGTTGCGGACATTGCAATCAATTATCTAACTGGAAACATGTCATACAGAGACACTGCCGCCTTAAGCACGACGGCGTCGTAAAAGTTATAGCCATCGAGAGGCCAAAGCCAGGCGAAGAGAATATTGGAAATAGTATAACACTAAGTGATCTAAATAATGACTTATGTACCAAGTGCCCCTTCAGGTCAAGTGATAAGAAACTGCTAATGGCACATGTACAACAACATACACCTTCACCATTGTCCATATTCAAGTGCTACTTCTGCAATTTCTTCGTGAAAACTGAAATTGAACTGATGCAACATCTCGTCATTCATGGTATTACAGAACCTGAAGAATATGTAGCCAAAGCTATGGGCAATAAAGATCCAATACCGGACCCGGTGATCATAGCAAAACGTCACAAATGCACTGAATGTCCATATGAAACAAACAGCAAGTCGCAGTACATGTACCATGAACAGTTTCATCGTCTACCAGCAAATACTCCATACAGATGTCAAGCATGCAATTATAGCGTTTCCAAGAGACATCTTCTTCATCAACACATGAAGGTCCATGGAATCGTAATACAGAAAAGAGATACCGATGAACTCGAAAACTCAACACTTAACTCTTTAAGCACTGAGACCATTACTGAAAAAATCCATGATGAAATTCCTTACGTGTGGGTGTCTGCCAAAAATGAATTTCATAAGATGCACAAATGCCGATATTGTTCGTATGTGAATTCACAAAAATGCAAAATACCAATTCACGAGAAAGTACACTGCGTAGAGACACTCGCTGCCacttattataaatgtttaGAATGTAAATTCACATGTTCCAGTGCATCTCGATTATCTGATCATTCTAAATGGCACAGCGAGATATATGGTCGAATATACTTTGCAGTCGAAAAAGATGTCCCTGATGAGGAACAAATTGCAAAATTGCGAGAATTTATTGAAGAGGAAAGGAATATGTTATCAACTCATGGTAATGACGATATGGCTAGAAATTGTAATGAAGAAGCAAAAATGTTATTCTTTTGCCAGAAATGTCCGACAAGATTTTTTTCTGAAAGTGAATTGAAGATCCACGTCAGCTTTCACGATAATAGCTTGCCAAACAAATGTCATAAGTGTGAATTTTCCGTTCCTCAAGATAATCAGCTTGTTAATCATGTTTACGTACACACCGATGAGTATCAATCGAAAACAAAAATGCTTAGACTTATCCATGAACCCCACCCCGAATACAAGGAACCTGTTCTTGAACTACAACATTGTTCTGAAACAACGGACAGAACATGGATTGTATCAGAAAATCAAAAttgtgataataaaataaaccatGATATAATTCATCATAAGCATACGATCAAACAATATTCATGTAAATTATGCCCAGCTCAATTTCCTAAAAACTCCGCATTGACTTATCACATGGGGTTGCACGGAGGAAGGGGTGAACATAAATGCAAAACATGTAATTACACTGTAAAGAACAGTGGAAACCTGGCGAAACACGAAGCTCTACACGATGGTAATAATGTAAACACTAATTGTGATTATGAATCTGGAGAAGATGTGGATTACAAAAACATTCCTTTATCTGGGACTGACCTCTTTCAAAGGAAAACAGAGGCCCAGAAAAGAGTGCTGACTGACAAAGATAAACTAGTGAAGCCAAATGATCATTTTCCACCAGTTCTTCAAGCTGATCCTCAATTTGGTTATTTGATGCATGGGAATCCAGAATTTATTTATCCTACTTATTTGAAAAACGGACGCCAAAAAGAGAAACGTTACAAGTGCCATAAATGTCCTTCAGCATTTGAAAAGAGAGAACAGTACAGAATACACCTGTCGCTACATGGATCTAAACAACGGTACAAATGTGAGGTATGCGACTATTCTGTCAAATATTACGCTAATTATGTTCAACATATGAGAAAACATCAAATGAATGATGAGGCACAAGCTGAACGAAAGAAGGGAATTGATATAGCGGAATCTGAAACCCAAGGGAATAGTCAGGACAGTGCAGACAACATTAAATTGGCAATAAAAACTATGCCTAGGGGTATTCCTAAAAGCGATTTCCAACAATTCTCTGTTAGTGATCAACAGACTCTTCGGCTTTTGCAAAGGCGACGATCCATAAACTCTGCAAGTAAAGAAATAACTTCAGCTGACACACCACTCAGCAAAGATCGCAAGCAACATTCGTGTATTCTGTGTCCATATATGAATCAGAGATTGGATGCTTTAATTAATCACCACAGGCGACATGACCCTAATGACAACATTAACAAATTAGGAAACTACCACAAATGCTGGATCTGTGATCTAGTGGTAATTCAGTCACATTTCCTGAGAGATCATCTTAAAACACATTTTACTTACCACAAGTCATATCAGCCACAGTGCTATGCTGCCAATAAGGATTCTATGTTCACAATTACAAAACTTGATGAAGAAATCTCCAGTACTGAAGTCATATTTTCTGAAGAGAAAGCCGAAACATTTGAAACCAATGAAGACAGAGTATTTGTTAATGAAACAGGTGAAGTGGTAGTTATAGCAAAAAATGCATAA
Protein Sequence: MLRRTPPPAPALAPDGTASSEVSSDDAELPQCKIRRNYTCSKCAFYTQNPRAFLTHARDVHYEKFKIYDCPHCVYASRHHQKLMRHERMVHGPAAAAAARAVDLSDTEDLLEEVEDAPEPPPTTGSADRKSKFFSCEKCNYVTHLKSRFTKHVKYHSMPMIKCALCDFRTPYKWNLDRHNKNHGGGGAFCCCVCNFTADIKQSLTVHEMNHHTPPAGVGHSATTRRRSRPPAATAARLTLLASLALDEGSGDSLSLSEVGSQQSEMSEMYNNDSNDMIIEVTNKDEPSQDRVQSFNHIDDMIQPNRKRARPMPQLIPLNTSTPVQGKSSYEPSPKSFKEGATLSETEYGQKLNELPADMSFVPVNTTSSIKGDYPPKKKNESFFDKLKQRLLNESGKEGSLTCKNCGFESKCLSEHSVHEKTCSSTTSRVVANATVSNTGSTRCQNCRHRCKSSADLYLHLQTCTVNNKIYPENNTKSRNDSSVKEKEGEPHPMENVVFVWNNINTESNKFETPLDININDDSTIARGDRHYDPNNVDALHDDEGMSLSPTQAVGKRVYKCPHCPFWASTASRFHVHIVGHLNKKPFECSLCQYKSNWRWDITKHIKLKSARDPDHNEAKVLMTDETGRRNYSKYQKFLAMLTLNDNGENVFQYIDENTTTIEISMEVDEPHNGFSNESSMSPNVQPLNLQTKQQKDSDTNSDETKKPKRTLWKCKKCNYRDPSKEALLEHIRDHAKTFDDNHEDSKLTKKSELSKDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVVKVIAIERPKPGEENIGNSITLSDLNNDLCTKCPFRSSDKKLLMAHVQQHTPSPLSIFKCYFCNFFVKTEIELMQHLVIHGITEPEEYVAKAMGNKDPIPDPVIIAKRHKCTECPYETNSKSQYMYHEQFHRLPANTPYRCQACNYSVSKRHLLHQHMKVHGIVIQKRDTDELENSTLNSLSTETITEKIHDEIPYVWVSAKNEFHKMHKCRYCSYVNSQKCKIPIHEKVHCVETLAATYYKCLECKFTCSSASRLSDHSKWHSEIYGRIYFAVEKDVPDEEQIAKLREFIEEERNMLSTHGNDDMARNCNEEAKMLFFCQKCPTRFFSESELKIHVSFHDNSLPNKCHKCEFSVPQDNQLVNHVYVHTDEYQSKTKMLRLIHEPHPEYKEPVLELQHCSETTDRTWIVSENQNCDNKINHDIIHHKHTIKQYSCKLCPAQFPKNSALTYHMGLHGGRGEHKCKTCNYTVKNSGNLAKHEALHDGNNVNTNCDYESGEDVDYKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYRIHLSLHGSKQRYKCEVCDYSVKYYANYVQHMRKHQMNDEAQAERKKGIDIAESETQGNSQDSADNIKLAIKTMPRGIPKSDFQQFSVSDQQTLRLLQRRRSINSASKEITSADTPLSKDRKQHSCILCPYMNQRLDALINHHRRHDPNDNINKLGNYHKCWICDLVVIQSHFLRDHLKTHFTYHKSYQPQCYAANKDSMFTITKLDEEISSTEVIFSEEKAETFETNEDRVFVNETGEVVVIAKNA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01042320;
90% Identity: iTF_01042320;
80% Identity: -