Basic Information

Insect: Nemapogon koenigi
Gene Symbol: -
Assembly: GCA_963924495.1
Location: OZ004631.1:11365944-11370900[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.1 73 4.7 3.6 2 22 85 105 84 105 0.94

2 15 2.1 1.5e+02 3.7 1.0 1 23 201 223 201 223 0.82

3 15 0.19 13 7.0 0.3 2 23 356 377 355 377 0.96

4 15 0.035 2.4 9.3 0.7 3 23 461 481 460 481 0.97

5 15 0.17 12 7.2 0.8 1 23 489 511 489 511 0.97

6 15 0.1 7.2 7.8 3.4 1 23 540 562 540 562 0.95

7 15 0.017 1.2 10.3 4.9 1 23 570 592 570 592 0.99

8 15 0.11 7.4 7.8 3.2 1 23 672 694 672 694 0.97

9 15 0.0051 0.35 12.0 1.7 1 23 749 771 749 771 0.94

10 15 0.36 25 6.1 0.8 2 23 778 799 777 799 0.96

11 15 0.0014 0.096 13.7 0.2 1 23 864 886 864 886 0.96

12 15 0.00095 0.066 14.3 1.6 1 23 892 914 892 914 0.94

13 15 0.0057 0.4 11.8 2.5 1 23 1004 1026 1004 1026 0.97

14 15 7.5e-05 0.0052 17.7 1.2 1 23 1032 1054 1032 1054 0.99

15 15 0.003 0.21 12.7 2.1 1 23 1178 1200 1178 1200 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.1	73	4.7	3.6	2	22	85	105	84	105	0.94
2	15	2.1	1.5e+02	3.7	1.0	1	23	201	223	201	223	0.82
3	15	0.19	13	7.0	0.3	2	23	356	377	355	377	0.96
4	15	0.035	2.4	9.3	0.7	3	23	461	481	460	481	0.97
5	15	0.17	12	7.2	0.8	1	23	489	511	489	511	0.97
6	15	0.1	7.2	7.8	3.4	1	23	540	562	540	562	0.95
7	15	0.017	1.2	10.3	4.9	1	23	570	592	570	592	0.99
8	15	0.11	7.4	7.8	3.2	1	23	672	694	672	694	0.97
9	15	0.0051	0.35	12.0	1.7	1	23	749	771	749	771	0.94
10	15	0.36	25	6.1	0.8	2	23	778	799	777	799	0.96
11	15	0.0014	0.096	13.7	0.2	1	23	864	886	864	886	0.96
12	15	0.00095	0.066	14.3	1.6	1	23	892	914	892	914	0.94
13	15	0.0057	0.4	11.8	2.5	1	23	1004	1026	1004	1026	0.97
14	15	7.5e-05	0.0052	17.7	1.2	1	23	1032	1054	1032	1054	0.99
15	15	0.003	0.21	12.7	2.1	1	23	1178	1200	1178	1200	0.98

Sequence Information

Coding Sequence: ATGTCATTTGTACCAGTTAATACAACGTCATCAATTAAAGGCGATTATCCACCTAAGAAGAAAAACGAATCCTTCTTTGACAAATTAAAGCAGAGATTGCTCAATGAATCGGGCAAAGAGGGTTCTCTCACATGTAAAAACTGTGGGTTTGAAAGTAAATGTTTGTCCGAACATTCGGTCCACGAGAAAACTTGCTCGTCAACCACTAGTCGTGTAGTAGCTAACGCGACCGTCAGTAACACTGGTTCTACAAGATGCCAGAATTGTAGACACAGGTGTAAGTCTAGTGCTGATTTATATCTTCACTTGCAAACATGcactgtaaataataaaatttatcctGAAAATAATACTAAATCACGAAATGATTCTAGTGTTAAAGAAAAGGAAGGCGAGCCACATCCGATGGAAAATGTTGTATTTGTTTGGAATAATATTAATACAGAATCTAACAAATTTGAGACACCTCTAGACATCAATATCAATGATGATTCCACAATAGCAAGAGGTGATCGTCATTATGATCCTAATAACGTAGACGCGTTACATGATGACGAAGGAATGAGTTTGTCACCCACACAGGCCGTGGGAAAGAGGGTTTACAAGTGTCCTCACTGTCCATTCTGGGCTTCTACAGCCTCCAGATTTCACGTTCACATTGTTGGACACTTGAATAAGAAGCCATTTGAGTGTTCTTTATGTCAGTACAAATCTAATTGGCGGTGGGATATAACCAAACATATAAAATTGAAGTCAGCCAGAGATCCTGACCACAACGAAGCTAAAGTATTGATGACAGACGAGACAGGAAGACGGAACTATAGTAAATACCAGAAATTTTTGGCCATGCTCACCCTCAATGATAATGGGGAAAACGTTTTTCAATATATTGATGAGAATACCACGACAATCGAAATTTCGATGGAGGTAGATGAGCCACACAATGGATTTTCAAACGAAAGCAGCATGTCACCAAACGTACAGCCGCTAAACCTACAAACTAAACAACAAAAGGACTCTGACACTAATAGTGATGAGACGAAGAAACCAAAAAGGACACTTTGGAAgtgtaaaaaatgtaattacagGGACCCATCAAAGGAAGCACTGTTGGAACATATTCGTGATCACGCCAAAACCTTTGATGATAATCACGAGGACTCGAAACTAACTAAGAAATCTGAACTCTCCAAAGATCCTGCAGATTTAGCGTACCGTTGCGGACATTGCAATCAATTATCTAACTGGAAACATGTCATACAGAGACACTGCCGCCTTAAGCACGACGGCGTCGTAAAAGTTATAGCCATCGAGAGGCCAAAGCCAGGCGAAGAGAATATTGGAAATAGTATAACACTAAGTGATCTAAATAATGACTTATGTACCAAGTGCCCCTTCAGGTCAAGTGATAAGAAACTGCTAATGGCACATGTACAACAACATACACCTTCACCATTGTCCATATTCAAGTGCTACTTCTGCAATTTCTTCGTGAAAACTGAAATTGAACTGATGCAACATCTCGTCATTCATGGTATTACAGAACCTGAAGAATATGTAGCCAAAGCTATGGGCAATAAAGATCCAATACCGGACCCGGTGATCATAGCAAAACGTCACAAATGCACTGAATGTCCATATGAAACAAACAGCAAGTCGCAGTACATGTACCATGAACAGTTTCATCGTCTACCAGCAAATACTCCATACAGATGTCAAGCATGCAATTATAGCGTTTCCAAGAGACATCTTCTTCATCAACACATGAAGGTCCATGGAATCGTAATACAGAAAAGAGATACCGATGAACTCGAAAACTCAACACTTAACTCTTTAAGCACTGAGACCATTACTGAAAAAATCCATGATGAAATTCCTTACGTGTGGGTGTCTGCCAAAAATGAATTTCATAAGATGCACAAATGCCGATATTGTTCGTATGTGAATTCACAAAAATGCAAAATACCAATTCACGAGAAAGTACACTGCGTAGAGACACTCGCTGCCacttattataaatgtttaGAATGTAAATTCACATGTTCCAGTGCATCTCGATTATCTGATCATTCTAAATGGCACAGCGAGATATATGGTCGAATATACTTTGCAGTCGAAAAAGATGTCCCTGATGAGGAACAAATTGCAAAATTGCGAGAATTTATTGAAGAGGAAAGGAATATGTTATCAACTCATGGTAATGACGATATGGCTAGAAATTGTAATGAAGAAGCAAAAATGTTATTCTTTTGCCAGAAATGTCCGACAAGATTTTTTTCTGAAAGTGAATTGAAGATCCACGTCAGCTTTCACGATAATAGCTTGCCAAACAAATGTCATAAGTGTGAATTTTCCGTTCCTCAAGATAATCAGCTTGTTAATCATGTTTACGTACACACCGATGAGTATCAATCGAAAACAAAAATGCTTAGACTTATCCATGAACCCCACCCCGAATACAAGGAACCTGTTCTTGAACTACAACATTGTTCTGAAACAACGGACAGAACATGGATTGTATCAGAAAATCAAAAttgtgataataaaataaaccatGATATAATTCATCATAAGCATACGATCAAACAATATTCATGTAAATTATGCCCAGCTCAATTTCCTAAAAACTCCGCATTGACTTATCACATGGGGTTGCACGGAGGAAGGGGTGAACATAAATGCAAAACATGTAATTACACTGTAAAGAACAGTGGAAACCTGGCGAAACACGAAGCTCTACACGATGGTAATAATGTAAACACTAATTGTGATTATGAATCTGGAGAAGATGTGGATTACAAAAACATTCCTTTATCTGGGACTGACCTCTTTCAAAGGAAAACAGAGGCCCAGAAAAGAGTGCTGACTGACAAAGATAAACTAGTGAAGCCAAATGATCATTTTCCACCAGTTCTTCAAGCTGATCCTCAATTTGGTTATTTGATGCATGGGAATCCAGAATTTATTTATCCTACTTATTTGAAAAACGGACGCCAAAAAGAGAAACGTTACAAGTGCCATAAATGTCCTTCAGCATTTGAAAAGAGAGAACAGTACAGAATACACCTGTCGCTACATGGATCTAAACAACGGTACAAATGTGAGGTATGCGACTATTCTGTCAAATATTACGCTAATTATGTTCAACATATGAGAAAACATCAAATGAATGATGAGGCACAAGCTGAACGAAAGAAGGGAATTGATATAGCGGAATCTGAAACCCAAGGGAATAGTCAGGACAGTGCAGACAACATTAAATTGGCAATAAAAACTATGCCTAGGGGTATTCCTAAAAGCGATTTCCAACAATTCTCTGTTAGTGATCAACAGACTCTTCGGCTTTTGCAAAGGCGACGATCCATAAACTCTGCAAGTAAAGAAATAACTTCAGCTGACACACCACTCAGCAAAGATCGCAAGCAACATTCGTGTATTCTGTGTCCATATATGAATCAGAGATTGGATGCTTTAATTAATCACCACAGGCGACATGACCCTAATGACAACATTAACAAATTAGGAAACTACCACAAATGCTGGATCTGTGATCTAGTGGTAATTCAGTCACATTTCCTGAGAGATCATCTTAAAACACATTTTACTTACCACAAGTCATATCAGCCACAGTGCTATGCTGCCAATAAGGATTCTATGTTCACAATTACAAAACTTGATGAAGAAATCTCCAGTACTGAAGTCATATTTTCTGAAGAGAAAGCCGAAACATTTGAAACCAATGAAGACAGAGTATTTGTTAATGAAACAGGTGAAGTGGTAGTTATAGCAAAAAATGCATAA
Protein Sequence: MSFVPVNTTSSIKGDYPPKKKNESFFDKLKQRLLNESGKEGSLTCKNCGFESKCLSEHSVHEKTCSSTTSRVVANATVSNTGSTRCQNCRHRCKSSADLYLHLQTCTVNNKIYPENNTKSRNDSSVKEKEGEPHPMENVVFVWNNINTESNKFETPLDININDDSTIARGDRHYDPNNVDALHDDEGMSLSPTQAVGKRVYKCPHCPFWASTASRFHVHIVGHLNKKPFECSLCQYKSNWRWDITKHIKLKSARDPDHNEAKVLMTDETGRRNYSKYQKFLAMLTLNDNGENVFQYIDENTTTIEISMEVDEPHNGFSNESSMSPNVQPLNLQTKQQKDSDTNSDETKKPKRTLWKCKKCNYRDPSKEALLEHIRDHAKTFDDNHEDSKLTKKSELSKDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVVKVIAIERPKPGEENIGNSITLSDLNNDLCTKCPFRSSDKKLLMAHVQQHTPSPLSIFKCYFCNFFVKTEIELMQHLVIHGITEPEEYVAKAMGNKDPIPDPVIIAKRHKCTECPYETNSKSQYMYHEQFHRLPANTPYRCQACNYSVSKRHLLHQHMKVHGIVIQKRDTDELENSTLNSLSTETITEKIHDEIPYVWVSAKNEFHKMHKCRYCSYVNSQKCKIPIHEKVHCVETLAATYYKCLECKFTCSSASRLSDHSKWHSEIYGRIYFAVEKDVPDEEQIAKLREFIEEERNMLSTHGNDDMARNCNEEAKMLFFCQKCPTRFFSESELKIHVSFHDNSLPNKCHKCEFSVPQDNQLVNHVYVHTDEYQSKTKMLRLIHEPHPEYKEPVLELQHCSETTDRTWIVSENQNCDNKINHDIIHHKHTIKQYSCKLCPAQFPKNSALTYHMGLHGGRGEHKCKTCNYTVKNSGNLAKHEALHDGNNVNTNCDYESGEDVDYKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYRIHLSLHGSKQRYKCEVCDYSVKYYANYVQHMRKHQMNDEAQAERKKGIDIAESETQGNSQDSADNIKLAIKTMPRGIPKSDFQQFSVSDQQTLRLLQRRRSINSASKEITSADTPLSKDRKQHSCILCPYMNQRLDALINHHRRHDPNDNINKLGNYHKCWICDLVVIQSHFLRDHLKTHFTYHKSYQPQCYAANKDSMFTITKLDEEISSTEVIFSEEKAETFETNEDRVFVNETGEVVVIAKNA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01042320;
90% Identity: iTF_01042320;
80% Identity: iTF_01042320;