Basic Information

Insect: Nemapogon koenigi
Gene Symbol: -
Assembly: GCA_963924495.1
Location: OZ004639.1:11175325-11186177[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.014 0.98 10.6 1.0 1 23 314 336 314 336 0.99

2 12 0.15 11 7.3 5.1 1 23 343 366 343 366 0.92

3 12 0.036 2.5 9.3 0.7 2 23 371 392 370 392 0.96

4 12 0.00051 0.036 15.1 2.3 1 23 397 420 397 420 0.95

5 12 0.045 3.1 9.0 0.0 1 23 425 448 425 448 0.94

6 12 0.033 2.3 9.4 0.0 3 20 460 477 459 479 0.96

7 12 0.00019 0.013 16.4 0.0 3 23 489 509 489 509 0.99

8 12 0.0036 0.25 12.4 0.2 3 23 531 552 529 552 0.97

9 12 0.0035 0.24 12.5 4.2 2 23 566 587 565 587 0.97

10 12 8.8e-05 0.0061 17.5 0.3 1 23 593 615 593 615 0.97

11 12 0.00069 0.048 14.7 2.8 1 23 621 643 621 643 0.97

12 12 0.00053 0.036 15.1 3.6 1 23 649 672 649 672 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.014	0.98	10.6	1.0	1	23	314	336	314	336	0.99
2	12	0.15	11	7.3	5.1	1	23	343	366	343	366	0.92
3	12	0.036	2.5	9.3	0.7	2	23	371	392	370	392	0.96
4	12	0.00051	0.036	15.1	2.3	1	23	397	420	397	420	0.95
5	12	0.045	3.1	9.0	0.0	1	23	425	448	425	448	0.94
6	12	0.033	2.3	9.4	0.0	3	20	460	477	459	479	0.96
7	12	0.00019	0.013	16.4	0.0	3	23	489	509	489	509	0.99
8	12	0.0036	0.25	12.4	0.2	3	23	531	552	529	552	0.97
9	12	0.0035	0.24	12.5	4.2	2	23	566	587	565	587	0.97
10	12	8.8e-05	0.0061	17.5	0.3	1	23	593	615	593	615	0.97
11	12	0.00069	0.048	14.7	2.8	1	23	621	643	621	643	0.97
12	12	0.00053	0.036	15.1	3.6	1	23	649	672	649	672	0.95

Sequence Information

Coding Sequence: ATGGTTACCACTATGAAGGGCATATTGGTATGCAAAACTTGTTTGATTACAAATGTGAAAATGTTCCATTTGTTAGATACTTTGGCTAATGCTTATTCGCAACTAACTGGATCGGAATGTGATGGTGTAACAAGGGAATATGTGTGTTACGAATGTGCTGCTCTATTGCTCAAATATCAACAATTTCGCACAAAATGTTTGAGAGCTAATAAAGTGATTTCAgaatttgttggaaaatattGTAAGATAACagagaatattataaatacaatagaCCGTAAATTACATAACCTTGAATCAACaattaataaatttgaaatCAAGGAAAATACATTTAATGAATTTTACAATGAATCCAAATTTGATGGACATGGAAATGACGGACCTGAGCAATCTATTGTGATAGAAATTGATGATGTAATAGTGCCTagtgaaattaaaaatgaaGTAAATCTAAATGATGACAAAGATCAAACTGTTTCAAATGACAATGAGTCATTATATGAAGAGTATTTAGAAGATGATATTGATGTTGTTATAGTAGCTAGTGAAATTAAAGATCAAGTAGAACTATATGATGACAAAAATGTATCAGATGAAAATGGATCATTACATTTAGAAGATGACGTAAGTTTGGACAAAGACtgctttttaaaattagatgATGACTGCAAAGATGATGTAAGAAAAAAGGCAGTGGGTGAAAGAATCGAAATTAAGAAAAAGAAGGGACCacaaagaaataatttagaGCATGAAAGTGTTGAAGAAAGGGAACCTAGTATTAAATTACAGAAGAaatcaagaaaaaaaatcagaaaaagtGAGTTAGCAAGTGGAGAATTGGAAGAATGTGTTACAGTTGTGAACTTAACACCAGAAGAAGCCAAGAAGGAAATTCTGTTAAGGAAGGAGTCTGATAACTACCAGAAAAATCCTTACAAATGTGACTTGTGTTACAGGGGATATGGGGTACTTAATACATATGAAAACCACATGAAAAAACATAATAagGAAATGGGAGAGTACAAGTGTGATTGTTGTCACATAAGGTTTTCAAAAGTTGGTAATCTAACTAAACACAGATATGCTAATCACACCATGAAAGTTTACTGCAAGGTCTGTCCTTACATTTGTTTCAATCAAACCCAGGCAAAAGCCCATATAAATTTGCATAAAGGAAAGAAATATCCATGTCAAGAATGTGACCAGGTATTCAACATGCCAAACACTCTGCGGGCACACCAACATCACAAACATTTGTCATGCGAGTTCGTGTGCGCGCTGTGCGGCACTATATTTGGTAAAGAACGAGGTCTCAGTCTACATATCAGCTTGTTACACAAACAGGAAGCAAACGACCAGAAAGGACCACTATGTGAAGAGTGTGATATACATTTTGCAACTGAAGCTGCTTGGAAGAGACATTTGGTGCTCTCATCTAAACATACTGTCagtaaTGGATGTGAAGTGTGTGGTGAAACTTATGAGAGTGAAGAAGCGTTGAAGAGGCACGCTAGAGTACACACACGAACGATAATTCAGATGACTAAACATAAATACTACCCTCTGAACAAAAAGCCCATCGATTGTAATAtcTGTAAAAAAACGTTGATTGGAAGAGTTAAATATATTGAGCACATGAGGACAGATCACCCAACAGTGGCTCCCAAGACAATAGACTACGACTATGTACAATGTGAAATTTGTGGGAAAATGTGTAGGtatCATTCGTTCTATATGTACCACCAAAAGATACATAGAAGTGAAAGGCCGTACCCGTGTCTAGAGTGCGGTAAGAGTTTCAAAACGCGGACCATATTGAAAATTCACCTCGCGTCACATTCCTCTGTGCACTTGTACAAGTGTCCGCAATGTCCTAAAACATTTGCTTTTCAGAGCTCCCATAGCAAGCATCTTAAggCACACCTCGGTATCCGTCCACACAAGTGTAATATTTGCGACAAAAGTTTTCCGACTCCCTGTGAAGTGAAGTATCATACTCAATACGTCCATCAGAAGTTACCTTGGCCCAAACGGGATCGCAGTAAAAGGAAGAAAAGTGCTCGTGTCGTCTCCTGA
Protein Sequence: MVTTMKGILVCKTCLITNVKMFHLLDTLANAYSQLTGSECDGVTREYVCYECAALLLKYQQFRTKCLRANKVISEFVGKYCKITENIINTIDRKLHNLESTINKFEIKENTFNEFYNESKFDGHGNDGPEQSIVIEIDDVIVPSEIKNEVNLNDDKDQTVSNDNESLYEEYLEDDIDVVIVASEIKDQVELYDDKNVSDENGSLHLEDDVSLDKDCFLKLDDDCKDDVRKKAVGERIEIKKKKGPQRNNLEHESVEEREPSIKLQKKSRKKIRKSELASGELEECVTVVNLTPEEAKKEILLRKESDNYQKNPYKCDLCYRGYGVLNTYENHMKKHNKEMGEYKCDCCHIRFSKVGNLTKHRYANHTMKVYCKVCPYICFNQTQAKAHINLHKGKKYPCQECDQVFNMPNTLRAHQHHKHLSCEFVCALCGTIFGKERGLSLHISLLHKQEANDQKGPLCEECDIHFATEAAWKRHLVLSSKHTVSNGCEVCGETYESEEALKRHARVHTRTIIQMTKHKYYPLNKKPIDCNICKKTLIGRVKYIEHMRTDHPTVAPKTIDYDYVQCEICGKMCRYHSFYMYHQKIHRSERPYPCLECGKSFKTRTILKIHLASHSSVHLYKCPQCPKTFAFQSSHSKHLKAHLGIRPHKCNICDKSFPTPCEVKYHTQYVHQKLPWPKRDRSKRKKSARVVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -