Basic Information

Insect: Nemapogon koenigi
Gene Symbol: -
Assembly: GCA_963924495.1
Location: OZ004639.1:11231126-11242442[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.01 0.72 11.0 3.9 1 23 259 281 259 281 0.99

2 10 2.1e-05 0.0014 19.5 0.6 1 23 342 365 342 365 0.96

3 10 0.0009 0.062 14.3 0.1 1 23 369 392 369 392 0.96

4 10 0.05 3.4 8.8 0.1 3 20 404 421 403 423 0.96

5 10 0.0014 0.094 13.8 0.0 3 23 433 453 433 453 0.99

6 10 0.0069 0.48 11.5 0.2 3 23 470 491 468 491 0.97

7 10 9.4e-07 6.5e-05 23.7 0.9 1 23 509 531 509 531 0.98

8 10 0.00041 0.028 15.4 0.9 1 23 537 559 537 559 0.96

9 10 1.4e-05 0.001 20.0 6.7 1 23 564 587 564 587 0.97

10 10 6.1e-05 0.0042 18.0 1.5 1 23 593 615 593 615 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.01	0.72	11.0	3.9	1	23	259	281	259	281	0.99
2	10	2.1e-05	0.0014	19.5	0.6	1	23	342	365	342	365	0.96
3	10	0.0009	0.062	14.3	0.1	1	23	369	392	369	392	0.96
4	10	0.05	3.4	8.8	0.1	3	20	404	421	403	423	0.96
5	10	0.0014	0.094	13.8	0.0	3	23	433	453	433	453	0.99
6	10	0.0069	0.48	11.5	0.2	3	23	470	491	468	491	0.97
7	10	9.4e-07	6.5e-05	23.7	0.9	1	23	509	531	509	531	0.98
8	10	0.00041	0.028	15.4	0.9	1	23	537	559	537	559	0.96
9	10	1.4e-05	0.001	20.0	6.7	1	23	564	587	564	587	0.97
10	10	6.1e-05	0.0042	18.0	1.5	1	23	593	615	593	615	0.98

Sequence Information

Coding Sequence: ATGAAGGGTGTATTGGTCTGTAAAACTTGTTTGATTACAAATGTGAAAATGTTCCATTTAGATATTCTGGCTAATGCTTATTCTGAATTAACTGGATTACAatgtGATGATGCAACAACAGAATATGTGTGTTACGAGTGTACTGCTCTTTTGCTCAAATTTCAACAATTTCGCACAAAATGTCTGAGAGCTAACCAAGTGATCTCAAAATTTGTTGACAAATGTTGTAAGGTAACCGAGGATGTAGTAAATATGATTGACCGTAAATTGCACAACCTTGAATCAACAATTGTTAAAAttgatattaaagaaaatattgtaagtgaattttacaatgaatccaaatttaatataaaagaaaacaaaggACCTGAGGTATCTATTAAAATAGAAATTCTTAATGAAGCTAGTGAAATTAAATGTGAAGTCTATGACGATAATGATCAAGCTGTATCAAGCATAAATGAGCCATTACAGTTAACAAATGATATAAGGTTAGATAAAGAACCAATAACATTGTTGGTAAAACAAGAGACGGAAGATGAAAGCAcgaaaattatgaaaaagacTGAACCACCACTGAAACCACTGAAGAGGAAGAAATTAAGACAAGAAAGTattgaagaaaagaaaaataattcaagTACAGGAATCATAAACAAAGGAGATAATAGCTTAATGgaagaatatataaaaattgtgaaTTTGACACCAGAGGAGGCCAAGAAGGAAATTCTGTTAAGGAAGGAGTCCAGTAACTACAAGACAAATCTTTACAAATGTGACCTGTGTTACAGAGGATATGGGACACATCAGACATATGAAAACCACATGAAAAAACATAACAAGGAAAGTGGAGAGCATGACTGTGACTGTTGCCACATAAGGTTTTCGGCACGGCGTTATCTATATAGACATGTACTAAAATGTCACACCAACAAATTTTGCTGCATACTTTGTTCATACACTTGTTTCGATTCTGGCCAAGCAAAAATCCATCTAAATCTACACAAAGGAAAGCAATACCCATGTAAAGAATGTGGACAGATCTTCAGCATGCCAAACAGTCTAATGACACATCAACGTTTCAAACATACGTCAGAGTTCGTGTGCGCGCTGTGTGGCACTGTGTTTGGTAAAGAACGAGGCCTCAAACAACATATCAATTTGTCACACAAACAGcaaACAAACGACCAGAAAGGTCCACTGTGTGAAGAATGTGATGTACATTTTGCAACTGAAACTGCTTGGAAGAGACATTTGGTGCTCTCATCTAAACATACTGTCAGtAATGGGTGCGATGTGTGCGGCGAAACTTATGAGAGTGAAGAAGCGTTGAAGATACACTCCAGAGTACACGCACGGGAATATAATCCGATGAATAGAAGTATCAAGCAGTACATCGATTGTACCATGTGTGAAAAAACGCTGGTTGGAAGAAGAGAATATCTTATGCACATGAGGACAGGTCATCCAGAAATGGCTCCCAAACTAGAAGACTATGATGATACTAGAAATATGCCATATGTATGTGAAGTTTGTGGGAAAACGTTTAAGttGCAGAAACTCCTCACATACCACCAAAGGATACATACAGTTGAAAGACCGTATTCATGCGCTGAGTGTGGTAACAGCTACAAACGGAGAAAAGAACTAAAAATTCACTCTGACAAACATTCGTCTTCGCGTCACCAATGTCACCTGTGTGAGAAGACCTTCGTGTATCGGAGCTCGCTTAAGAAGCATATTAagAAACAGCATGGTGCCGTTCGTCCATACAAGTGTAATATCTGCGAGAAAGCTTTTGCGAGTCCCTCTGAAGTGAAGTATCATAAACACTCCCATGAGAAAGTACCGGGGCCTGGGCCCAAACGGATTCGtagtaaaagaaagaaaattgcTCAGAAGTCTACTTCTGTGACTTCATAA
Protein Sequence: MKGVLVCKTCLITNVKMFHLDILANAYSELTGLQCDDATTEYVCYECTALLLKFQQFRTKCLRANQVISKFVDKCCKVTEDVVNMIDRKLHNLESTIVKIDIKENIVSEFYNESKFNIKENKGPEVSIKIEILNEASEIKCEVYDDNDQAVSSINEPLQLTNDIRLDKEPITLLVKQETEDESTKIMKKTEPPLKPLKRKKLRQESIEEKKNNSSTGIINKGDNSLMEEYIKIVNLTPEEAKKEILLRKESSNYKTNLYKCDLCYRGYGTHQTYENHMKKHNKESGEHDCDCCHIRFSARRYLYRHVLKCHTNKFCCILCSYTCFDSGQAKIHLNLHKGKQYPCKECGQIFSMPNSLMTHQRFKHTSEFVCALCGTVFGKERGLKQHINLSHKQQTNDQKGPLCEECDVHFATETAWKRHLVLSSKHTVSNGCDVCGETYESEEALKIHSRVHAREYNPMNRSIKQYIDCTMCEKTLVGRREYLMHMRTGHPEMAPKLEDYDDTRNMPYVCEVCGKTFKLQKLLTYHQRIHTVERPYSCAECGNSYKRRKELKIHSDKHSSSRHQCHLCEKTFVYRSSLKKHIKKQHGAVRPYKCNICEKAFASPSEVKYHKHSHEKVPGPGPKRIRSKRKKIAQKSTSVTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -