Nkoe022111.1
Basic Information
- Insect
- Nemapogon koenigi
- Gene Symbol
- ZFY
- Assembly
- GCA_963924495.1
- Location
- OZ004656.1:1951872-1971567[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.15 10 7.4 1.6 1 23 210 232 210 233 0.95 2 19 0.0031 0.21 12.6 2.5 2 23 241 262 240 262 0.96 3 19 0.2 14 7.0 2.6 1 23 293 316 293 316 0.95 4 19 0.0026 0.18 12.9 6.9 1 23 319 342 319 342 0.97 5 19 0.011 0.77 10.9 1.8 2 23 346 368 345 368 0.92 6 19 0.31 21 6.4 1.6 3 21 378 396 377 401 0.92 7 19 0.00043 0.03 15.3 0.1 2 23 410 432 409 432 0.91 8 19 1.5e-06 0.00011 23.0 0.7 1 23 438 461 438 461 0.98 9 19 8.8e-05 0.0061 17.5 0.5 3 23 472 492 470 492 0.97 10 19 0.58 40 5.5 0.1 1 19 498 516 498 518 0.90 11 19 0.1 7.2 7.8 2.4 1 17 687 703 687 709 0.89 12 19 0.0027 0.18 12.8 0.4 3 23 743 764 741 764 0.94 13 19 1.8e-05 0.0012 19.7 0.8 2 23 769 790 769 790 0.96 14 19 2.8e-05 0.0019 19.1 1.0 2 23 797 818 796 818 0.96 15 19 0.37 26 6.1 0.9 3 22 829 848 828 852 0.92 16 19 0.024 1.7 9.8 0.7 1 20 860 879 860 880 0.91 17 19 0.17 12 7.1 6.5 1 23 889 912 889 912 0.93 18 19 0.0014 0.098 13.7 1.6 2 23 922 943 921 943 0.97 19 19 0.00017 0.012 16.6 0.2 1 23 949 972 949 972 0.96
Sequence Information
- Coding Sequence
- atggatAATGAGGTTCTAGAAATCAAACATGAATATAATTTGCAGAAAATTAAGAAATGCCAAATATGTTTAAGTGTTAATAGAAAACTGTCTCCTATAGGCCACCTTTCAGCAATGTATATCAATCTATTGCCTACATACTCATTTCACGAagctCATTTATCCACATTAATATGCTGGGAGTGCAAGGCAACACTATGCAAATTCATAGAATTTCAGAAAAAAGTATCTATCGCAGAATCTTTTTTGCTGTATACAACTGAAAATGAGaATCCTCAAAGGGCACTATCAAGTTTAACATCAATTATTATAACAGAAGATAAATATATACACGTAATACACTCCAACAAACCAGACGAAGCAAAActtgaaaatcatgaaaatgaCAGTTTCAGCGACAATGAAAcatctgaaattaaaaatgaaattaaaatggagaaaatcaGCAGTAAAGTTGCCTATGAAAATGTATGGAGAAAAAAGAGAGCAGAGACTAATAAGCATGCTGTGAAAGTTACAGACATAAGCAACAAGAAATAtgcttataaaaaagtgtttataAATCAAGCACTATTAATTGACGCTTTAGACAAGGAAAGACATAGTGATGGGTTTGTTAATGAGCTGCATAAATGTGGAAGTTGCGTCATAAGTTTTGGGACGGGAAAAGATTTGGCGAAACATGAAAGATTGCATCATGATGAGAATATTGGTGATTTAATATGCGACGTATGCCATTCGAGGTTTTCGGACAAGCACCTATTAGCGTCTCATGTCAAAAGTCACTTGTACAAGTATGAATGCATGCACTGTCAATATGGATGTTACAATCATCATTCCATACATCAACATCTGAAGAGGAGGCACAGGAAAATGTATGAGTGCGTCAAATGTGGGCGCCAGTTTTGGAAACGCGTAGACTTTTCTAAACATCACAAGGAGATGCACGAAAACTATATTTGTGATTATTGTGGACTGTGTTTCAAGATGAgatattgtataaaaaaacatataagAAAAAAGCATTGTCCACTCGAATGCAAGCAGTGTAAAAGAAAATTCAGCCGATACAATGGTCTGTGGCTCCATAACAAATTAAAACATCCCGCCCATAAACTGGAGAAGGCGTACTGTGTTGAATGTaacaaatattttgataatatataTTGTTACAAATGGCATCTGAATAATAGCGTGAGACATAAACCGAAGAAAAAAATAAGcgtgCCCTGTCCCGGATGCGATAAAGTGTTCTCTAAGAACATCTACATGAAGAACCATTACGACTTGGTGCATTTGAAGATGTTTAAGTACAGGTGCGAGCAGTGCGACAAGAATTTCGTCCGCAACGCCGACTTAGTGAAGCACACGCGTCGCGTCCACGAGGGGCAACAGAAAccgaaaaataaaatgtgttacATGTGCGGCAGAGGATTCTCGTCAAACAGCATTCTGGCGAACCACATGCGCACTCACACTGGGGAACGGCCATTTCAGTGTCAGTATTGCGCGGCTAGGTTCGCGCAGAAAGTGGCCATGATGGGTCATaaaattgaaGATTTGAAAACATTATCCAATTTGAAGCATGCAGTTAAACAAAACTATGATGCGGAACTTGATCATGCTCAGATTAAAGTAGAGCCTCTGGAATACTTTGAATTCAATAATTGTCATGAAGAATCACTAGAAATGAATGTTAAAGATGAAATAGACGAAATAAACGAAACAGATCACAATTCAGATGTAGACTATGaagataatattaaagaaaatgtattgaAAGCGGCTGAAAAGGAGAatgaaaaaagtataaaaaagaagaaaaatgacAAAAAGAGAGTTTCGAAAATtgcagaaaattggaaaatgacTTTACAATGCAAGCTCAATATAAGAATGATGAGTGAGACAGAGATGGAGAAGTCGAGAGAGCAAGATAGACTGATGAAGTGGTATGAAGAAAGCCAGTATAAATGTAAAACTTGTATAGTTGGTTATAAAAACAAAGGTGTATATGATAAGCATGTAGCTCTCAAACATTCTGAGAAATCTGGAAAATACATTTGTGACATTTGCAAAATGCACTTCTCTACCAAGAAGGACCTCGTCCCCCATTGCACGTCCCACTACAAACTGTATGAATGTAAAATATGTCAAGAATCCCACCATCGACTTAAAGTTATGAGCGCACATTGTATGAAACAACATGAAGACAGAAAGTATGGGTGCAAGATCTGTGGAGCCGAGTTTAGtacatATACAACTTTACGCTATCACCGTGACATAAAACACAAAGAAAAACCAAAATGCGAGGAATGCGGCAGAGTTTTCTCGAATGATACTAATTTGAGGAGACATTCTATGTTGCATACAGAAATACCTATGCTGCAATGTCAGATTTGCCAAAAGATGTACAAAGGCAAGTACGGATTAAAAGCTCATATGAGATTTCATAATAACACTGCGCCTACGGAGCTGGCTTATTGCGCGGAGTGTAATATGCAGTTTAAAAATGTGATTCTGTACAAAAGTCACTTGAAGAAAAGCTCTCGACATGTGGCGCCCGAGTTGAAAAAACACGCGTGCCCCGAGTGCGGCAAACGCTTCCTGGAGAAGAAGTTCCTCGAGCGACACTATGACTGTGTACATCTGAAGAAACGGGAGCATGCCTGTCATATATGTTGTAAGATATACTCCAAGTCTTACTCACTGAGGCAGCACATAAAGTTCGTGCACGAGGGGTCGTCGAGACCGCGGAATAAGGTGTGCGGGGTCTGCAATAAGAGATTTACGGCGCTGCACGTTCTGAAGAACCATGTACGAACGCACAcgggagaaaaaccatatataTGTGGTTTGTGTGAAATGAGATTTACGCAGAAAACGACCTTAGCTACACATATCAGAGGTGTTCACCAGATGGTCAAGAAGAACAGATAG
- Protein Sequence
- MDNEVLEIKHEYNLQKIKKCQICLSVNRKLSPIGHLSAMYINLLPTYSFHEAHLSTLICWECKATLCKFIEFQKKVSIAESFLLYTTENENPQRALSSLTSIIITEDKYIHVIHSNKPDEAKLENHENDSFSDNETSEIKNEIKMEKISSKVAYENVWRKKRAETNKHAVKVTDISNKKYAYKKVFINQALLIDALDKERHSDGFVNELHKCGSCVISFGTGKDLAKHERLHHDENIGDLICDVCHSRFSDKHLLASHVKSHLYKYECMHCQYGCYNHHSIHQHLKRRHRKMYECVKCGRQFWKRVDFSKHHKEMHENYICDYCGLCFKMRYCIKKHIRKKHCPLECKQCKRKFSRYNGLWLHNKLKHPAHKLEKAYCVECNKYFDNIYCYKWHLNNSVRHKPKKKISVPCPGCDKVFSKNIYMKNHYDLVHLKMFKYRCEQCDKNFVRNADLVKHTRRVHEGQQKPKNKMCYMCGRGFSSNSILANHMRTHTGERPFQCQYCAARFAQKVAMMGHKIEDLKTLSNLKHAVKQNYDAELDHAQIKVEPLEYFEFNNCHEESLEMNVKDEIDEINETDHNSDVDYEDNIKENVLKAAEKENEKSIKKKKNDKKRVSKIAENWKMTLQCKLNIRMMSETEMEKSREQDRLMKWYEESQYKCKTCIVGYKNKGVYDKHVALKHSEKSGKYICDICKMHFSTKKDLVPHCTSHYKLYECKICQESHHRLKVMSAHCMKQHEDRKYGCKICGAEFSTYTTLRYHRDIKHKEKPKCEECGRVFSNDTNLRRHSMLHTEIPMLQCQICQKMYKGKYGLKAHMRFHNNTAPTELAYCAECNMQFKNVILYKSHLKKSSRHVAPELKKHACPECGKRFLEKKFLERHYDCVHLKKREHACHICCKIYSKSYSLRQHIKFVHEGSSRPRNKVCGVCNKRFTALHVLKNHVRTHTGEKPYICGLCEMRFTQKTTLATHIRGVHQMVKKNR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -