Nkoe005551.2
Basic Information
- Insect
- Nemapogon koenigi
- Gene Symbol
- -
- Assembly
- GCA_963924495.1
- Location
- OZ004633.1:4269642-4277378[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.11 7.6 7.8 1.2 3 23 573 594 572 594 0.95 2 24 6.3 4.3e+02 2.2 1.0 4 23 965 986 963 986 0.84 3 24 0.34 23 6.2 0.2 1 21 991 1011 991 1012 0.96 4 24 6.4 4.5e+02 2.2 0.4 1 22 1054 1075 1054 1077 0.82 5 24 0.0015 0.11 13.6 0.7 3 21 1088 1106 1086 1107 0.94 6 24 0.73 50 5.2 0.1 3 23 1116 1137 1114 1137 0.90 7 24 0.002 0.14 13.3 0.1 3 23 1158 1179 1156 1179 0.97 8 24 0.0024 0.16 13.0 3.6 1 23 1185 1208 1185 1208 0.94 9 24 0.14 9.9 7.4 0.0 1 23 1234 1257 1234 1257 0.90 10 24 0.021 1.5 10.0 3.4 1 23 1262 1284 1262 1284 0.97 11 24 0.022 1.5 9.9 0.3 1 23 1290 1313 1290 1313 0.95 12 24 0.0087 0.61 11.2 1.6 1 23 1326 1348 1326 1348 0.97 13 24 0.0002 0.014 16.4 1.8 1 23 1395 1418 1395 1418 0.97 14 24 0.0065 0.45 11.6 1.8 1 23 1477 1500 1477 1500 0.96 15 24 0.0023 0.16 13.0 1.5 2 23 1526 1548 1525 1548 0.95 16 24 0.39 27 6.0 0.1 2 23 1554 1576 1553 1576 0.92 17 24 0.011 0.76 10.9 0.2 1 21 1618 1638 1618 1639 0.95 18 24 0.0014 0.097 13.7 0.6 1 23 1647 1669 1647 1669 0.93 19 24 0.00013 0.0088 17.0 0.3 2 23 1765 1787 1765 1787 0.93 20 24 3.7e-07 2.6e-05 25.0 1.2 3 23 1794 1814 1793 1814 0.98 21 24 0.78 54 5.1 2.6 1 23 1832 1854 1832 1855 0.93 22 24 0.45 31 5.8 0.0 1 23 1881 1903 1881 1903 0.97 23 24 0.38 26 6.1 0.2 1 23 1909 1932 1909 1932 0.95 24 24 0.0071 0.49 11.5 0.6 1 23 1940 1963 1940 1963 0.96
Sequence Information
- Coding Sequence
- ATGAGTGCTAATCGTGAACGTGTTTGTAGACTATGTCTCTCGTGTCGGAGAGATTTGCTGCCCGTGTTTCCGGCGGACGGGACTGACTGTCCGGGCCCCTCTGGGGTCCTACTGGCGACCAAGATAGAGGCATGTGTCGCCGTACAGATAAGCGAGGATGACGGCCTGCCGAGCTCCGTGTGCAGGAAGTGCCTGGACAACGTCAACAACTGGCACATATTCAAGAATGTATGTGAAAAGTCCCAAAACAAGTTGCTTTCTTGGAAAAAAGATTGCAGCCAACTGGAAGAGATTAAAGTGAAAAGTGAGCCTGTTTCTGATGAGGCATATGATGATGGAGTGGTTATTGATGGTTTCTACCCAGAGACTAATCAGaATGCCACTTCATCACATAAATTACAACCTGAAGGCCCTCCAATCTTGGCTTCACTTGGACTCACACCGAGAAGTGATAAGAATTGTGTGGATCCAAGATTGGACTGGCATCGTGTGCATGCAATATTGGATTTGGTGCAAGATGATGAGATCATAGATTCTTTACAATCAATGGAAGAGAGTGATATCGCACAACATTCTGATCATGACTCTGAGAGTGAAGCAGAAATGATATCAGTTCCAGACCAGTATATTGATTGTAAGGAAGGATACATGAGCAAAGATGGAAATGTATTTAGCAAATCTGCAAAGTTGGGCTCCAATACTAAAATAGAATCATTTAAGCTGGAAATAGGTTCGCGTGCACTGAAATATCACACTGCAAAAAATATGTGGCAGCAATTTTTTAGTGATGATATACTAGACCTTATAGTTGATTCCACAAATGAGAATATTGCTAACAATAAAAATGGTGAACCCACTAGTATTACTGAAATAAAAGCTATGATTGGCATCTTATATTACCATGGTGTTGTGAGATCTACACATCCTAATAGAAAAGAGCTTTGGGATGATAGTTTAGGTGCCACAGTAATTAAAAAATGCATGACATTACAAAGGTTTGAATTTCTTTTGAAAAATCTTCATTTTGAATCTGAGAATGTTGaggatattttaaattatgatgTAATGAAAAAGATGAGAAAAGTTTTCGAAATATTTGCACACAATTGCAGAACAGTAAATCAAATTGGCAATAGTGCTGTAGTGGATGAAACTATAGTTCCTGTTCAAGGACCTTGCCCATTTAGATACTCAtctaaaaacaaaaacattgaTACTGGTTTTAAAATGATTGTTGTTGCCGATCCTAACAATTTTTATGTGAGCAACTTGGAGATTGTTACTGACACTATTCAACTACCTgaagatattataaaaagagtaTTGCAACATTTGGCCAACACTGGGCGCACAATTTTCATGGATAGCTGGTTTACATCACTTTCTTTGATGAATCAACTTGGAAAAGAATATCATCTGTACACTGTTGCAGCTTTGAATCCTAATGACAGTTTGATACCACCATTATTTTTATCTCATCAGAGGCCGAGTAATTCATTTATGACAGCCTTTATAAACAATAACACCACATTGACATCCTTCGGCGTCGAGAGTGAAAAAGAAGAAGTAGATGAAAATGAAGACGACGAGCCCGTTGTTGAAACAGAACAATACGCAAAAGTACCTTCAATGCCTGAAGTTTCTATTACTGTAATGAGACCATCCGGAGAAACATTACACGCCCGCCAAGGAATACAACAATTAGCTTCCAAAAATTGTCTCGTGTGTAGTCGAGCGTACAGATATTCTCACAACGCTCGTCGACATGAACTCACAGCGCACGGTTTTGATAGATACACCAACAAAGTGAACAAAGTGAATAAGAAAATGCAGTCTCATATGCAGCCCAAATTGATGCCTAATCCATTTAATCCTAAAGCTCGGCTAATGCCAAATCCTTTAAATCATAAAATGAAATTTTTACCTAAATATATGCCAGGAAAGACACCGCACAAAGTTATACCACAGCCCAGGCCTGTACCAAAACAAATTTCAATTAAACCAACGCAAAATAATTTACCATACCCTCTGCGAATTAAAGCACTTAaagatttacaaataaaaaagaaagaaccacaaatattaaaaacattattgtCATCTAAACCGGAAGTATTAGTTTCTGAACCTGAAATAATGAACTCTGGCCCTGAAAGTCCTGAAACATTGATATCAGAGCCAGAAATTGCTTCTTTCCAAGTAGAAGCTATCCTCTCTGAACCAGACGCATTTGAAAATCAACAAGGTGATGAAGAAGACGCTGAAGGAATGGAAGAAGATACTCATAAGAGCAATACTTATGATACTGTAGATATGGAGTCAGACAATGAAATTGAGATTGCTCGTGAAAGAGAAGACGGTGGCGACGAAAATGAGGAATTAGAAGATCAGCAAATGGATGAAGATAACGGTTTAGATGATAAGTTAAGTGACAACGACAATAATGCCATAAAAGAGGAAGACGAAAGTGAAAATGGTAAAGAACTTGTTAATCATGATGATCAAGACGAAGCCGAATATGATGGAATGGATAAACAAGATGGCGCGGGCAGAGATATGATAACAGATGGTGACGACGGGTTTGATGACAATGACGCTGTTCGTGATGAGAACGAAGAAGATGGCGAAGATGAAGAACCACCTATTTTGGGATTGGCGCCGGTTGTTGAGATCAACGAGGAAGTGCAGGCCAAGTCTTGTAACAGCGAAGTTATGGATGAAGAGGCAGAAGAGGAAATTGACGAGTCTGCTGACATTTCTAACGTTGCCGACGTGGATGATTCAATGAAGATAGAAGCGTACGATCCCGACAAATTGTATGTCACGAAAACGCAAAGGGACTTCATTCAACGACATCGTGACATAATCCAACAGATTAATACAAAACGTTGCTTGTGTTGCAACAAGGAATATCCTCGCAGAAAAGCGGTAATACAACATCTACAGAAAATTGGACACAAAGTTCCTAAACATACTTGTTACAACTGTGTGATTACTTTTGGTCATATTGGGGCTCTCTTAAGTCACATGAGAGCCAACATTTGTACCAATTTGTGGAAAGTTATTTACAATGAAGAAGGCGTTACAGATGATATGGTCATAGGAAGCGAGCCCAAAGGTAACAAAGTTCAATACAAAGATATTTTCAATGCCAGATCTTATGCATGTAAACTCTGTAATGCCAAGTTCCAGTTGAAACAGTTCATAATGAAGCACGTGCTTGATGTACACGAAGATGGCCAATCGTTCGTACCTCTGGCCTGCGTACACTGCGGTTCTAGGTTTAAAGATAAAAGTCTGTGGAAGAAACACATTCGGAACGGAGATTGCACCGTCTATATAGCCTGTGACTTGTGTACAGAAAAGTTTGCCAATATGCAGAGCTTCAACGATCACGCACTGGAAGTTCACGCGGGGAGCTTCGGTCAGTCGGATAATCAAAGCAAAACTGTAGACGGAAGACCCACCGACTGTCCTATATGTGGGAAGAAGAACATTAACTATCCTAATTTAGTTAAACATATAAGAACTATTCACAACGAAGATAAACCGCACTTCTGTCAGCACTGCGACGCTAAGTTCGAACAAACCTCCGACCTTAATAAACATATTTACATGGAGCATTTTGATAAAACGAATACCAACCAAAATTCCGAGCCAGACATGTCCATAGTGAAAGAGGAAGCTGAAGAATATCATTACTCGTGCACCGAATGTAATGCTATATTTGAAACAGTCGATGCGTGGACGGACCACCAGGTCGCCGAACATAATCAAGTAGCGCACCACTGTGACCAGTGTGAAAAGAAATTTTTAAGACCATCCGAGCTAGCTGAAcataaaaatacacatttaaGGGTTAAATTTTACCCTTGTAGCGTGTGTTCCAACTCGTACAGCACACCTCAGAAGCTATCTGATCACGTACAACAGTCTCACTCTGGCTCTGTCGGCGTCACCGCTACGGACGCTGAGTTCTTTTGCGAGCTGTGCATTAGGTCTTTCAAGAGCCGGCAGGCTTACTCCAACCACATGCGTATACATGCCAAAGTACCCACTACCAATAGACGCCCGGAACCTAAAGGATTCACACCGCAAATTATCGGAAAACCTATCAATCAATTTCCGATTTCCAATTCTGGATTTGTATACAAACCTAATTGTAACGTTCCTAACGCACCGTATTCATGTGACATCTGCGGTAAAGGATTTATGCATAAAAAGAACATTTGGAAACACAAGAAGGTTCTGCATGCAGACTTAATCAGCGACCGAAACGACAGCGAGGAGAACACGATGCACGCGTCCACTGAGGATGACGAGTACAATAACGACGAGAACGGCACACAGCTCAGCACGCCGCAGTTCAACAGCTTCAACTTCTCCGGCTTCGGCGGTCTGAGCAGCGCTCAACAAGAGCCCGCGCAGTACTCGTGCGAGCTGTGCTTCAAGAAGTTCCCGCTGCGCACCAGTCTGTGGAAGCACAAACGGGCCAAGCACGGCATCGTTAACATCAACGCCGGCGCTTCCGAGGCCCAGGCGCAGCCCGGGACCTCCGAAGGATCCGGCCGCTCTAGCTGCACCATCTGCAAAATCACCTTCGCCGACAAGAAATCTTACTACCGCCACAGGAAGAACGTGCACAAGTCAAACGTGCAGATGTGCAAGATTTGCGGGAAGCCGCTCGGCTCCACCCTCGAACTGTACGAACATCTGAAGGCGGCGCACGCTCGCGAGCTGCTCGGGTATAATGCCAACCAGGCCGGCAAGCAACCGGAGAGTCAGCCGGACGAGCCCGAGTACGAGCCGGACCGCGAGCCGGTCGACCCTGCCGCCGAGTACCAAGCACGCTACCCGTGCGACACCTGCGGGAAACAGTTCGTGGGGCTGCTCGCGCTGCAGAACCACCAGTGTGTCAATCAGTCGCAGCAGCAGACTTTCGACTGCGAGATCTGCCACAAGAGCTACACCTCGATCGCCGCGCTCAAGAGTCACCGCGGCTGGCACCTGCGCTCGCCAGACGGGAAGGCGGCCGCCAACAACTCCGGTCTCTGGATGCCGCAGCATAAGGTCACCAACAAGGTCAGTAAGCACGAGGTGGTAGATGCGTCCCAGCTGGCGCGCGTGAGCCTCGCGCCACCCTCGCCCGTGCCCACCCCCACCCCCGCCCCATCCACCAAACGCCGGCTGCCGCCTGAGGTGGAGGTGACCGTCGTCAACCCCAACAAGAAGATGCGTTCCGAGGACTCCGAGAGCGAGGTCGCGCAGCCGCCGGCCGGCCCCGACGACCGCTACTGCACTATCTGCGACAAGGAGTTCACGAAGCGCGCCGCCTACCAGCGACACATGGACGAGGTGCACCAGCCCAACTCAGTATTCTGTCCCGTGTGCGACAGGAGTTTCACTCGCAAGTCGACATTGCTCGTCCACATGCGTAAACACTACGGCGAGGAGGAGGGCGGGCCCAGCGCGCCTCCCGCCGACGACGAGCTGCATGCGTGCGACCTGTGCGGCGCGCAGTATCACTCAGACAAGGCGCTGCGAGCTCACCGCGCGAGGCATCACGGAGAGGACTCGCCCGACGAGGACGACGCGCCGCTGTCCGCCAGTCTGCCGTCCGCGATCGCCCCGCCCGGTGAGTTCACGTGTGCGCAGTGCGGTGACGGCGTGGCCACCCCGCGCGACCTGCTCGCCCACCGCACGATCCACGCAACCCCGTCCAGTTTCCACTGCGCCGTGTGCAAGGTGTACTTCGCTCGCGGCCCCGATCTCGCAGCACACACCCGCGCGCGACACTCCGACAATGACAAGGTGTTTTTCCCGTGCGCCATGTGCGACCGCTTCTACCTGAACAAGAAGAGTTTGCAGCGACACATCGAAATGTCGCACTGA
- Protein Sequence
- MSANRERVCRLCLSCRRDLLPVFPADGTDCPGPSGVLLATKIEACVAVQISEDDGLPSSVCRKCLDNVNNWHIFKNVCEKSQNKLLSWKKDCSQLEEIKVKSEPVSDEAYDDGVVIDGFYPETNQNATSSHKLQPEGPPILASLGLTPRSDKNCVDPRLDWHRVHAILDLVQDDEIIDSLQSMEESDIAQHSDHDSESEAEMISVPDQYIDCKEGYMSKDGNVFSKSAKLGSNTKIESFKLEIGSRALKYHTAKNMWQQFFSDDILDLIVDSTNENIANNKNGEPTSITEIKAMIGILYYHGVVRSTHPNRKELWDDSLGATVIKKCMTLQRFEFLLKNLHFESENVEDILNYDVMKKMRKVFEIFAHNCRTVNQIGNSAVVDETIVPVQGPCPFRYSSKNKNIDTGFKMIVVADPNNFYVSNLEIVTDTIQLPEDIIKRVLQHLANTGRTIFMDSWFTSLSLMNQLGKEYHLYTVAALNPNDSLIPPLFLSHQRPSNSFMTAFINNNTTLTSFGVESEKEEVDENEDDEPVVETEQYAKVPSMPEVSITVMRPSGETLHARQGIQQLASKNCLVCSRAYRYSHNARRHELTAHGFDRYTNKVNKVNKKMQSHMQPKLMPNPFNPKARLMPNPLNHKMKFLPKYMPGKTPHKVIPQPRPVPKQISIKPTQNNLPYPLRIKALKDLQIKKKEPQILKTLLSSKPEVLVSEPEIMNSGPESPETLISEPEIASFQVEAILSEPDAFENQQGDEEDAEGMEEDTHKSNTYDTVDMESDNEIEIAREREDGGDENEELEDQQMDEDNGLDDKLSDNDNNAIKEEDESENGKELVNHDDQDEAEYDGMDKQDGAGRDMITDGDDGFDDNDAVRDENEEDGEDEEPPILGLAPVVEINEEVQAKSCNSEVMDEEAEEEIDESADISNVADVDDSMKIEAYDPDKLYVTKTQRDFIQRHRDIIQQINTKRCLCCNKEYPRRKAVIQHLQKIGHKVPKHTCYNCVITFGHIGALLSHMRANICTNLWKVIYNEEGVTDDMVIGSEPKGNKVQYKDIFNARSYACKLCNAKFQLKQFIMKHVLDVHEDGQSFVPLACVHCGSRFKDKSLWKKHIRNGDCTVYIACDLCTEKFANMQSFNDHALEVHAGSFGQSDNQSKTVDGRPTDCPICGKKNINYPNLVKHIRTIHNEDKPHFCQHCDAKFEQTSDLNKHIYMEHFDKTNTNQNSEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCSNSYSTPQKLSDHVQQSHSGSVGVTATDAEFFCELCIRSFKSRQAYSNHMRIHAKVPTTNRRPEPKGFTPQIIGKPINQFPISNSGFVYKPNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLISDRNDSEENTMHASTEDDEYNNDENGTQLSTPQFNSFNFSGFGGLSSAQQEPAQYSCELCFKKFPLRTSLWKHKRAKHGIVNINAGASEAQAQPGTSEGSGRSSCTICKITFADKKSYYRHRKNVHKSNVQMCKICGKPLGSTLELYEHLKAAHARELLGYNANQAGKQPESQPDEPEYEPDREPVDPAAEYQARYPCDTCGKQFVGLLALQNHQCVNQSQQQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTNKVSKHEVVDASQLARVSLAPPSPVPTPTPAPSTKRRLPPEVEVTVVNPNKKMRSEDSESEVAQPPAGPDDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDRSFTRKSTLLVHMRKHYGEEEGGPSAPPADDELHACDLCGAQYHSDKALRAHRARHHGEDSPDEDDAPLSASLPSAIAPPGEFTCAQCGDGVATPRDLLAHRTIHATPSSFHCAVCKVYFARGPDLAAHTRARHSDNDKVFFPCAMCDRFYLNKKSLQRHIEMSH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -