Basic Information

Gene Symbol
RTase
Assembly
GCA_963924495.1
Location
OZ004647.1:3703994-3722736[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-07 0.00019 22.0 0.1 2 46 1100 1144 1099 1144 0.96

Sequence Information

Coding Sequence
atggacaactggcaaaaagtggacactgttactgatgtatctggacccaccgcaaggtatagaggccgtgaagAAAATTCATATCACACTTTATCTAGCTTGTCGATGGACGATGACGATCTTGAGTGCTCACCTATGCTATCGCCCGATAGGCTCAACAGAAGCTGTCCTGAAAGAACTCTTATTTATGCTAAAGTAGAAGATATGGAACAAACTATTATCGATTTGCGGGAAAGgcCAGTTGATCAGAAAGAATGTTATAATACAATTATGGCATTAAAGAATACAAACTCCTGTGGCTATGACAGTATCACTACTAAAATTCTCAAATCATGTGCCTCCGTCATAAGTTACCCACTTGCTCATATAGTTAACTTATCATTTGCTGAAGGGATTTTCCCGGAGAAACTAAAAACTTCCGTTGTCAAACCGCTATTTAAGAAGGGGGACAAACTGGACCTAAATAATTACAGACCTATAACACTTGTACCAATCTTGTCCAAAGTATTTGAAAGGGTAATACACAAAAGATTAAACGACTTTCTGGGTAAATTTGACATACTACATAAAGATCAATATGGTTTTCGCAAAGGTGGTTCGACCTCACTTGCTTGCTTTAATTTTGTACGTATTATATCGGAAAGTATTAATGACAAAACGAAAGTCATGTCAGTCTTCCTTGATATGAGCAAAGCTTTTGATTTTGTTAATCATACTAAGCTCTTGCACAAGCTTGATCTTTATGGTATCCGAGGCAAAGCTCTTGATTGGATAGAGAGCTATCTTAAAAATAGAAGACAGTGCACTGAGATatcaaaaattattgaaaaaaataatgttctcCTAAGAAAGACTTATAGATCTCAGTTTAAGTTAAATAATACGGGCGTGCCTCAGGGCAGTATACTTCGTCCTTTGCTTTTCCTACTGTATATAAACGATCTGCAGAGTGCCACTTCACACAGATGTATACTGTTTGCAGATGACACGACCATTGTAATAAAACATGACAATAAATACACATTCGAGTTTGAAGCTAACAAGGCTCtatctgatattattaattgGATGGAAGTTAATGATTTgcagataaatataaataaaacaaagttcatgCAGTTTACGTCTTATAATTCATGTCCTGTTCCGATTCAAGTCCGCTATAAGGATGATAAAGTGGATGAAGTAAACACTTTTAAGTTTCTCGGTATAGTTATCGATAATCATTTAAATTGGAAAGAACACGTTGAACATGTATGTAGCCGGTTGAATCGGTTTGTTTTTGCTCTAAAAAGGTTGAGACAGACTGTTTCAATTCAGGCTGCGTTAACAGCATATCATGGATACGTGTCGTCTGTACTTAGCTATGGCCTAGTGCTATGGGGGAACTCGGTGGACCTCGATAGAGCATTTAAGATACAGAATGGCAGCCAGAAAGGTGCGAGTTCTGGTGCTAGCGGAGCGGGTAGCGGCGCGACTGGAGTTTATCGGCCGGGTGACAACAAACCCGTTGAATGTAATCTTTGCCAtcggaaatttaaaaatataccagCTCTAAATGGTCATATGAGATTACATGGCGGTTATTTCAAAAAGGATTCCGACAGCAAAAAGTCTGATAAAAAGGAATCAACCGGCCCTCCCCTACAAACAGCTTCAGTGTCCGTACGCGCCCTCATAGAAGAGAAGATCATAAGTCGCCGTGGAGCTGTAGCATCATCAGCCGCTGCAACTGCAATAACTGAAACAGTAACATCGAGAACAAGTTTCATAGCACCAACGCCGCCCCCGGTCTCTTCTACTCGTGTATCGACCACGTCACCTGCGTCCCCAGCCACGGCACAGTTTCTACCTCCGAGAGCGCCACCTGTTCTCGCTGTGACGCCCGCTTTTGTCCAACGTGACTCCACACTTATAGAACTTTTGAAGAAAGGCAGCACTAAGATTGTAAAAAGATCAGCGTCGGACCCAGGACAATTCTCGCCTCAACCTGACCTTTCATTTAGACCCGAATTATTTGGAGTATCATTTAACTCCGACGATGGTTATTTTTCACCAGCATTGCAAGACGATGCTTTTCAGTTCCCCGCTAATACGGAACATTTAGAAGAACTGGCTCAATTAGAAGACTACGCTTCGGTCGCTGCTTCAATCAGAGATCGGTCTCCTGTCACTTTCCCGTCCAATCGTCGCTTAGCAGCTGTGCTTAACTCTCCGCTGCCAGAATCATTAGCTGATTTCGGCGCTTGTCATGGGGGCTCCCCTGTTCCTTCTCCTGGTATTGCTTATACTGCAAATTCCCCTGGCCTTTCATATACCACTGGAGATTCGCCTGGCCTTGCATATACAGATGCGTCACCTGGTGGAGCTTATTCAGCACATGCGGCTGCTTCTCCAGGATTTGGGTATCCTACTCCTCCAGGATCACAGGATGCTCATTCTCCAGCACATACTGTCCCAAGAGCGTCTTCACCTCTTTCAGCTGCTTTCTTTACTGCCACAATGTCAAGCCAAGAAGAGgtCGAAGAAGCTTTAGAAGAAGTGTTGCCAGAGGAATGCGGTTCCTTAGACGCATTTGCACTAGATCCCTCTCCTGCTCCGCGTCGGATCATGCTGAACTCTGAAGACCCACTTTTATCAAGCAATCCTAGAGACTTTGTTCATCAACGAGTCCGTCGTAACCAACGAGCTGGCACGAGCTCGTCTACCGCCGGTTTACCACCTCATCAATGGCATACACCTCATGATTCGCCTAATTTACAGGTGAATATGGATGGGAGAGATATTGTGTTTGTAAATCCTGGAGAAGTTCCATCTTCACCTCAACGACGTAAACGACGAGCGCCTCCCCCGGGGCCATACAGAACAAGACTACGTCGTTCAGTGGCACACTACACTCCTCAACCTATGCTATATCCTGAACGCGATGGCAGTGGACTGTTTGTTGAACTTAATCCAGGTATTCAAGGAGCGGGAATGGAAAGTAATTGTGAAAATGAAGGGTCACGAACACCCCAGATTAACGTCGGTGAAGATCATCAAGCTGAAATACCGGAGTGGTCAGCGGACCGGGACGATTTGCATCGCGTACCAGAACAATTATTATGGGACCCTGGTATTAATGAATCACTGGATGAAAATGAAGtgCGCATGTTCATGGAGCTTGCGATGTGTGCCGCTATGCCAGTCGGTGGCCACACAAGAGAACATGCTCTGAAAATGCTGGGAGAATGTGGAGGCGATATCAGAGCGGCCACGCTTAGACTGATGCGTCGCGGGCCCGAACGAGGTTTTAGCGAAAGGTGGACTACAGACGAATTGGAAACTTATCTGGCAGCGCTGAGGCATTTTGACAAGGATTTCTATAGGATTTCCCAATTGataagaACGAAATCTTCTAAACAATGCGTCCAATTCTACTATTTCTGGAAAAAATTGACCAAAAACTACAAAACATTGTTCTTGCGAAGCTGGCTAGTAGAATCGAATGATCAGCaggaCATGGAAGACAAGGTACCCACCAATCAAGGGAATTCTGCAACATCTTCACCAAGCCCTTACGAAGGTGAAGAGTTCCCATGCAAGATCTGCGGGAAAGTATTTAACAAAGTTAAAAGTCGTAGCGCGCACATGAAGTCCCATCGGCCTCTCGACGCCGAATCAAAACGGCACAAATACGAAAAGCCTTATGAAAAGGTGGAATAA
Protein Sequence
MDNWQKVDTVTDVSGPTARYRGREENSYHTLSSLSMDDDDLECSPMLSPDRLNRSCPERTLIYAKVEDMEQTIIDLRERPVDQKECYNTIMALKNTNSCGYDSITTKILKSCASVISYPLAHIVNLSFAEGIFPEKLKTSVVKPLFKKGDKLDLNNYRPITLVPILSKVFERVIHKRLNDFLGKFDILHKDQYGFRKGGSTSLACFNFVRIISESINDKTKVMSVFLDMSKAFDFVNHTKLLHKLDLYGIRGKALDWIESYLKNRRQCTEISKIIEKNNVLLRKTYRSQFKLNNTGVPQGSILRPLLFLLYINDLQSATSHRCILFADDTTIVIKHDNKYTFEFEANKALSDIINWMEVNDLQININKTKFMQFTSYNSCPVPIQVRYKDDKVDEVNTFKFLGIVIDNHLNWKEHVEHVCSRLNRFVFALKRLRQTVSIQAALTAYHGYVSSVLSYGLVLWGNSVDLDRAFKIQNGSQKGASSGASGAGSGATGVYRPGDNKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDSDSKKSDKKESTGPPLQTASVSVRALIEEKIISRRGAVASSAAATAITETVTSRTSFIAPTPPPVSSTRVSTTSPASPATAQFLPPRAPPVLAVTPAFVQRDSTLIELLKKGSTKIVKRSASDPGQFSPQPDLSFRPELFGVSFNSDDGYFSPALQDDAFQFPANTEHLEELAQLEDYASVAASIRDRSPVTFPSNRRLAAVLNSPLPESLADFGACHGGSPVPSPGIAYTANSPGLSYTTGDSPGLAYTDASPGGAYSAHAAASPGFGYPTPPGSQDAHSPAHTVPRASSPLSAAFFTATMSSQEEVEEALEEVLPEECGSLDAFALDPSPAPRRIMLNSEDPLLSSNPRDFVHQRVRRNQRAGTSSSTAGLPPHQWHTPHDSPNLQVNMDGRDIVFVNPGEVPSSPQRRKRRAPPPGPYRTRLRRSVAHYTPQPMLYPERDGSGLFVELNPGIQGAGMESNCENEGSRTPQINVGEDHQAEIPEWSADRDDLHRVPEQLLWDPGINESLDENEVRMFMELAMCAAMPVGGHTREHALKMLGECGGDIRAATLRLMRRGPERGFSERWTTDELETYLAALRHFDKDFYRISQLIRTKSSKQCVQFYYFWKKLTKNYKTLFLRSWLVESNDQQDMEDKVPTNQGNSATSSPSPYEGEEFPCKICGKVFNKVKSRSAHMKSHRPLDAESKRHKYEKPYEKVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01042362;
90% Identity
iTF_01042362;
80% Identity
iTF_01042362;