Nkoe018049.1
Basic Information
- Insect
- Nemapogon koenigi
- Gene Symbol
- SMARCC2
- Assembly
- GCA_963924495.1
- Location
- OZ004649.1:6533901-6549125[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.5e-15 7.8e-12 45.7 0.1 3 44 531 572 529 574 0.95
Sequence Information
- Coding Sequence
- ATGAAATGTTTCATGGACCTGAAGGCAGGTGGGTCGCTGTGCACTGTCCTCGCCACCATGTTCCGCTTCAAGTCGGAGCAGCGGTGGCGCAAGTTCGACTTCCAGGTCGGTAAGAACCCGTCCCGGAAGGACCTGAACTTGCAAATGATGATGGAGATTGAGTCGGCCCTCTTGGAGAATGAGAACATCAGGTGCCCCAGTGTGTTCATTCGGCCCGAGGTAGACAAGGCCACGGCTAACAAAGTCAAGGACGTTATTGTTAATCACCAAGGAGAGATTTGTGACGACGAGGAGGACGCGACTCACATAATCTACCCGAGCGTCGACCCGCTAGAGGAGGAGTACGCCCGGCCGGTGTTCCGTCGCGGGAACTCGGTGTTGATGCACTGGTACTACTTCCCGGACAGCCACGACACCTGGGCGGTCGCCGATCTGCCGGTGGATGTACCAGAGAATGTTAGCTGGGAGATGACTCGCAACGAGCCCTGGCGCGTGTCTGCCACGTGGGCGCTGGACATGCCGCAATACAACGAGTGGATGAACGAGGACGACTACGAACTGGACCAGCATGGCAAGAAGAAGGTGCACAAGCTGCGTTTGTCAGTGGATGACATGATGCCGGGCAACGAGCCGACCACCAAAGTCAAGAAAGGGAAACGGAAGCGGTCTCCGTCACCGCCGCCGCAGAAACACGGCAAGAGGAAAAGTCGCCTTCAGAAGCGCGGCCGAGACAACGATCCTGAAGACGAGGAAGACACGACTTCTCGCGACAATACAGACGTCGCGCCTACACCGGACAACGAACGGTCCAATGATGGTGCTGCGAGTACGTCGGGTGACCAAGGCGCTGCGACACCCATTCCCGCGCCGCCCGTGGTCGCTGAGGCGCCCGCCACACCCGCGCCGGCTATAGAGCCTGTTGATGACTCTCAGAGCAAGCAAAGCGATTCTAATACACAGGAAACAACAACAAAGGAAGAGGACAACGTGACAGATCAGACTCATCATATTGTGGTGCCTTCATACTCGGCCTGGTTCGATTACAACTCCATACACACTATCGAGAAGAGAGCCATGCCGGAGTTCTTCAATGGGAAAAATAAGTCCAAAACGCCCGAAATATATCTTGCTTATAGAAACTTCATGATAGATACTTACCGCCTCAACCCCAACGAGTACTTGACGAGCACGGCGTGTCGGCGAAACTTGGCCGGCGACGTGTGTGCGATTATGCGTGTGCACGGATTTCTCGAGCAATGGGGTCTGATCAACTACCAGTTAGACGCAGATGTCCGTCCCACAGCTATGGGCCCGCCGCCCACGTCCCACTTCCACGTGCTGTCAGACACGCCCTCTGGCTTGCAGTCGCTCATGGCGAGAGCCACGCAACCCAGACCAGTGGAAAATGCGGCCGTGCCCAAACTCGAAGCTGGATTACCCAACGGAACAGATCCCGGCACCGCGGCGCCGTGTGTCCCCACGCAGCCCTCGGTGCTCACACCACTTTTGCCAAAAGCGGAGCAAACTCTCGAAATGGGCGGCGCGGCTGGACTTAAAATGGACCAGTATCGCACAGCAGCCCGCGGCCGTGAATGGACAGACCAGGAAACCTTACTGTTACTCGAGGCTTTGGAGTTGCATCGGGACGACTGGAACCGTGTCGCCCAACACGTCGGGTCTCGGACGCAGGACGAGTGCATATTGCATTTCCTGAGACTGCCCATAGAGGACCCTTATTTGGAGGACGCGCCTTCTGgtgGAGTGCTCGGTCCGTTGGCATACCAACCGATACCGTTCAGCAAGACCGGCAACCCTGTCATGAGTACGGTGGCCTTCCTCGCGTCCGTGGTAGACCCGCGAATTGCTAGCAAAGCGACGCGCGCCGCTATGGACGAGTTCGCAGCGATTAAGgaCGAAGTGCCGGCGGCCATGATGGAAGCGCATATAAAGACGGCCGGCGCGAGCGGTGCCGCCGCTTCACTCGCGAGCACCGGTATCGCTGGGACCGCGCCTGACCCACCTCCAACAGatGCACCCACAGAGAAGAAGGAGGGTGGTGATGTGAAAGTAGAGCCGATGGAAGTGGAAGAGCCAGAAAAGGTGAAGGAAGAGCCTACCGACCAGCCTCCAGCCGAAAATACTAAGGATACACCACCAGCACCAGAAAATGTCGAGCAAGTGGACGCCAAACTCCAGTCAGCCGCTGCCGCCGCGCTCGCCGCAGCCGCTGTCAAGGCTAAGCACTTGGCTGGCGTCGAGGAGCGCAAGATCAAGTCTTTGGTCGCGCTGCTAGTTGAGACTCAGATGAAGAAATTGGAGATAAAATTGAGGCACTTTGAGGAGCTTGAGGCCACTATGGAGAGGGAACGGGAAGGTTTGGAGTACCAGCGTCAGCAGTTAATTCAAGAGAGACAACAGTTCCACCTGGAACAGCTGAAGGCGGCAGAGTTTCGTGCCAGACATCAGGCGCATCAGAGGATACAGCAAGAAGGGGTGCCCGTGGGTATACCGAATGCTGTGGGTCCCGCGGGCCCCGTCGGACCTGCTGTGCCGCCGGAACAGCCCCCGGTTGAACAAGCGGTGGTTGCGCCGCCTCACCACGCCTAG
- Protein Sequence
- MKCFMDLKAGGSLCTVLATMFRFKSEQRWRKFDFQVGKNPSRKDLNLQMMMEIESALLENENIRCPSVFIRPEVDKATANKVKDVIVNHQGEICDDEEDATHIIYPSVDPLEEEYARPVFRRGNSVLMHWYYFPDSHDTWAVADLPVDVPENVSWEMTRNEPWRVSATWALDMPQYNEWMNEDDYELDQHGKKKVHKLRLSVDDMMPGNEPTTKVKKGKRKRSPSPPPQKHGKRKSRLQKRGRDNDPEDEEDTTSRDNTDVAPTPDNERSNDGAASTSGDQGAATPIPAPPVVAEAPATPAPAIEPVDDSQSKQSDSNTQETTTKEEDNVTDQTHHIVVPSYSAWFDYNSIHTIEKRAMPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPNEYLTSTACRRNLAGDVCAIMRVHGFLEQWGLINYQLDADVRPTAMGPPPTSHFHVLSDTPSGLQSLMARATQPRPVENAAVPKLEAGLPNGTDPGTAAPCVPTQPSVLTPLLPKAEQTLEMGGAAGLKMDQYRTAARGREWTDQETLLLLEALELHRDDWNRVAQHVGSRTQDECILHFLRLPIEDPYLEDAPSGGVLGPLAYQPIPFSKTGNPVMSTVAFLASVVDPRIASKATRAAMDEFAAIKDEVPAAMMEAHIKTAGASGAAASLASTGIAGTAPDPPPTDAPTEKKEGGDVKVEPMEVEEPEKVKEEPTDQPPAENTKDTPPAPENVEQVDAKLQSAAAAALAAAAVKAKHLAGVEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARHQAHQRIQQEGVPVGIPNAVGPAGPVGPAVPPEQPPVEQAVVAPPHHA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01451410; iTF_01453222; iTF_01452278;
- 90% Identity
- -
- 80% Identity
- -