Nkoe019223.1
Basic Information
- Insect
- Nemapogon koenigi
- Gene Symbol
- SNAPC4
- Assembly
- GCA_963924495.1
- Location
- OZ004651.1:4799358-4801304[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.17 2.4e+02 2.5 0.0 22 33 164 175 150 179 0.77 2 5 1.2e-07 0.00016 22.2 0.1 1 38 195 234 195 241 0.94 3 5 1.6e-10 2.3e-07 31.4 0.2 3 44 249 294 249 296 0.96 4 5 1.8e-14 2.5e-11 44.1 0.0 1 42 302 343 302 345 0.98 5 5 0.0089 13 6.6 0.0 3 44 353 396 351 398 0.76
Sequence Information
- Coding Sequence
- ATGGCTAACATTGATATAAGGGAATGCATTTTAGATGCTATTAAACTAAACAGAGAGGCTCATAATAAACTTAGGGAGTTTGAAAATTTACTAAACCAGAGACTAGTTCAAATCAGAAGACTGCAGAAGGACAAAGGTAAAATTGTACAAAAACCTAAACCTCCCAATTATTATCCATTCTTTAAAGATAAACATGGATCTAGTCCACCTGATAATGAAGATACTGTATATATGAGAGAAGCAGAAATGTATGATTTTTACAGTTGCAGTTCATCATATTTCACAGTAAAAGACAAAGGagactttttaaaaattttattagccATGGCTCGCGAGGCAAAGTCTAAAGAACTATTTAActctattacaaaaattaaaaaagaagagAAAAGCAATACAAACACAGAAAAGTTACAATGTTTGCTCAAGCAGTCCTTTCTTGTAGACAAAATGGAATTGAAAGATTTATATGGACTTGTAAGTGATTTTAATTGGAATACAATTGCTCAAAAACTTAAATACAGACATAAACCTCAGGAGTACCGAGCTATGTGGAACTTATTCCTACATCCATTAATTAACAAACAAGAATGGACAGATAttgaattgttaaaacttaaagaaGTTGCTCAAAATAACAACAACCAGAATTGGGTCAAAATAGCTAGAGAACTAAACACAAGTAGATCTCCATATCAATGCTTTGTCATGTACAGAACTAATATTGACATCAACAGTGGCATTAAGTGGACGAAAGATGAAGATAATACCTTAAAAAATCTTATGGAAAATTGTAAGGATGATTCTGCAATACCTTGGGGTCAAGTAGCTAAATCTCTTGTCAATAAAACTACTGTTCAGGTATATGATAGATGGAACAACTCTGTAAGGCCAGGTCTGAAAAAGGGCAGATTTACTAAGGAAGAGGATGAAGCACTATTAGCCTGTGTCAATAAATATGGCACTGATTTCAATTTAATATCTGAATATATTGTTGGTCGTTCTTCAAAACAGTTGCGACAAAGATATAAATGTCTCGACAAGTTTGTGTCTGTAGAGTGGTCAGTTGAGGAAGATCGAAAACTAATGTATTTAATGGCAGACCCGAGCAATCAAAATAAGTATTCAGAAATAGTACATAACTTTCCAGGGAAGAAAAACTTTAATTTGCGTATGAGATATAAAACTTTAGTAAAGTGGATGAATAAGAATCCTGAAGAAGATTTGGCATTGGCACCTCGTAGACCCCCTCGACGTTTATATCACGGAGAAAACACTAAAAATGTGGAAAAGGCTTTGCAGAAGTTGAAACAAAGTCGCACTGAAGCAGTAAAAAAGCCTTCAAAAGAAaagtatataaattcaattgtaactaaacttattaattataaaatgaaatCCGAGCAGCTGGTCAAACAGAAACAaagaattaaaacaaaaaaacgtaAATCTAAGTATACAAATTTAATGAACAAAAGTTCAGAGGAATTAAAAACCGAAAATTTGAAAAAGCTTCTTATCTTACTTAGAGCATCTGTAGATGAGAAAAGTTTTAAACAGAGTATTTATGCTAAAAAGTATCCAGATCTGTTAAGTCCACTCAAAACAGATGAAACATATTCCAAAGtgaaacttaattttaaaagttcACTTGATATTTGTAATAATACACTGAAAGGAAAAAGTAAATATGTCTTACCTCCAAACTTATCAACCATAATTGGATGCAGAAATTTAATGACAATGTTCAGAGAGCCGCAGGCAGAGAGTGATATATCTATAACAGCTATGTGCAACAAGAGTCCAGAGTTCAAGGTTAGTTGGACTAATTTTGTTAATAGGTTTACAACATTATTCTTTTGGCCTTTAATGTTGTCAAACATTCCACCTAAATCAGTAGGAATGCGCAAAGGTAGTGctctcaaaaataaaaataaaactaagtga
- Protein Sequence
- MANIDIRECILDAIKLNREAHNKLREFENLLNQRLVQIRRLQKDKGKIVQKPKPPNYYPFFKDKHGSSPPDNEDTVYMREAEMYDFYSCSSSYFTVKDKGDFLKILLAMAREAKSKELFNSITKIKKEEKSNTNTEKLQCLLKQSFLVDKMELKDLYGLVSDFNWNTIAQKLKYRHKPQEYRAMWNLFLHPLINKQEWTDIELLKLKEVAQNNNNQNWVKIARELNTSRSPYQCFVMYRTNIDINSGIKWTKDEDNTLKNLMENCKDDSAIPWGQVAKSLVNKTTVQVYDRWNNSVRPGLKKGRFTKEEDEALLACVNKYGTDFNLISEYIVGRSSKQLRQRYKCLDKFVSVEWSVEEDRKLMYLMADPSNQNKYSEIVHNFPGKKNFNLRMRYKTLVKWMNKNPEEDLALAPRRPPRRLYHGENTKNVEKALQKLKQSRTEAVKKPSKEKYINSIVTKLINYKMKSEQLVKQKQRIKTKKRKSKYTNLMNKSSEELKTENLKKLLILLRASVDEKSFKQSIYAKKYPDLLSPLKTDETYSKVKLNFKSSLDICNNTLKGKSKYVLPPNLSTIIGCRNLMTMFREPQAESDISITAMCNKSPEFKVSWTNFVNRFTTLFFWPLMLSNIPPKSVGMRKGSALKNKNKTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -