Nkoe017418.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nemapogon koenigi
Gene Symbol
ct
Assembly
GCA_963924495.1
Location
OZ004648.1:7044106-7047793[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.3e-32 3.5e-28 98.0 0.0 4 77 344 418 342 420 0.96
2 2 7.9e-31 5.3e-27 94.2 0.0 3 75 547 620 545 624 0.95

Sequence Information

Coding Sequence
ATGCTGTTTATAAATCAACTTCTAAATAGTAGCGGTGGACATTGTGCGTCCGCGCAGAGACAATATGTTGACAGGATGAATGTTGGAACAAAAGATGGAACTATTGGAGCAGGGTTTGGGAGACCTGATGGCGATGGTGACGATCGTTTGGCTCATATTCTCAATGAAATGAAACATCCGATGGGACAACAGAGCAACGATGACTCTAGAAGTAATGATGATTCTTGCTCTCCAAGAACGCAATGCCCATCGCCTTTTTCAAAGGATTCGAGTCAAAACCGTAGgttgaaaaaatatgaaaacgaTGACATTCCGCAAGAAAAGGTCGTTCGTATCTACCAGGAAGAGTTAGCAAAAATTATGAGTAAAAGGGTTGAAGACATGCGACACAACAGAGAAGGATTTCATGGTATGTTTCCTCCGTTTTTCAGCGGCGGAATGCCACCACACATGGAGCGACCCCCTGAAGATATACGAATGGCTTTAGAAGCATATCATCGAGAACTAGCAAAAATTCAACCTGGTGGAAATATACCAAATCTTCACAATATGCCTGGAATGCCACCCTTCCCAAATATTTTGGCACTTCAACAACAAGCAATGCACCAAGCGCAGAATCACCACGTTAACGGTTCTGGCGCCATTCAAGACCTGTCCCTTCCTAAAGAAAAGAGCGCTAAAATAAATGGTATGACTGATAGTGATAAGGATAAGCCCATAGATGCTGAAGAAGCGATAAGGCATGCCGGTAGCGCATTTAGTTTGGTGAGGCCGAAACTGGAACCTGGTTCGCATCAATCGACAGGTTCGTCAGCCTCTAGTCCGCTTGGTAATACAATTCTCCCGCCTGCCATCACGCCTAATGATGATTTTAATAGTTCAGCGGCCGCAAGTCCGCTTCAAAGAATGGCTTCCATTACAAACAGTTTGATATCACAACCTACAAACCCTCCACATCATAATCCTCCGCAAAGATCTATGAAAGCAGTTCTGCCTCCAATTACCCAGCAACAATTTGACCTGTTTAATAATCTGAACACCGAAGACATCGTAAGAAGGGTCAAGGAAGCCCTGAGTCAGTATTCTATCAGCCAAAGGCTATTCGGAGAATCCGTATTGGGTTTATCACAGGGTTCCGTTAGCGATTTATTAGCACGACCCAAACCGTGGCATATGTTAACACAAAAAGGAAGGGAGCCATTTATCCGAATGAAAATGTTTCTAGAAGACGATAATGCTGTGCACAAACTAGTGGCGTCGCAATACAAGATAGCACCTGAAAAACTCATGCGCACAGGCAACTACAGTGGAGCACCACccTGTCCACCAAACATGAACTTGAACAAGCCGATGCCGCCAACACATAAAATGTTATCTGATGCCAGCCACCTACTATCTAAAATGCAGCAAGAGCAGCTCCTACCGGGACACCTCGGTCCACTCGGTCAGCCGCCACCGCTACTACTTACGCCGCCAGGCTTCCCCCCACATCATGCGGTTACCCTCCCGCCTCAACATCACGACAACAATAACAAAGAGCGTAAACCACCGCCGCCACCACCGCACCATCAGCCACCAATCATGCGCAGCCTCCATCAACACATATCGCCGAGTGTCTATGAAATGGCTGCGTTAACGCACGACCTAGACACTCAAACCATAACAACCAAAATAAAGGAAGCTCTACTGGCCAAtaatatcggtcaaaaaataTTCGGCGAAGCTGTCCTTGGCCTGTCGCAAGGTTCCGTTAGCGAACTGCTATCCAAACCTAAGCCTTGGCACATGCTGAGCATTAAAGGTCGCGAGCCTTTCATTCGCATGCAGCTGTGGCTTAGTGATGCTCACAATATAGATCGCTTACAAGCCCTGAAGAACGAGAGACGTGAGGCCAACAAACGACGACGTTCCAGCGGCCCCGGACAGGACAATTCTTCAGATACCTCGTCAAACGATACTTCCGAATTCTACCATTCTAGTTCACCAGGACCAACATCTGGAGTTCCGTCTGCTAAAAAACAACGAGTTTTGTTCTCCGAGGAGCAAAAGGAAGCTTTAAGATTAGCATTCGCTTTAGACCCATATCCTAATACACCCACGATAGAATTCTTAGCTGCGGAACTAGGCCTTTCCACCAGGACCATCACCAACTGGTTTCATAACCATAGAATGAGACTGAAGCAGCAAGCACCTCACGGCCTACCGGCAGAACCACCGGCAAGAGATCAATCCTCCGCTCCGTTCCAGCCTGCTCAATTCCGTTTGCTACTGAATCAGCGATTGCTTGAGCTGCAAAAAGAAAGAATGGGTTTAGGAAGTGTGCCGTTACCATACCCACCCTTCTTCGCTGCCAATCCGAACTTAGCAGCACTAATAGGACATGGCCTGATACCTTCAGAGGAACAAGTAAAAGATCAGACCAGCGGGTTGGACTTGTCGATGCCGTTAAAGCGCGAGCCTGACGGTGAtgattttgatgatgatgatgttgaGAGTAATTTAGGGTCCGATGACTCATTGGACGATGGCGAATCCAAATCGGAGCCCAAGATGACCTCGACGCCTGCCAGTCGATCCAACCGACGGAAACCTGCAGCGCCGCAGTGGGTAAATCCTGATTGGCAAGATGAAAAGGGCAGGAACCCTGACGAGGTCATCATAAACGGGGTATGTGTTATGCGGGGGAATGATTACAGACGCGAGGCCGAGGAAACAGTTCTCGTAGAACCGTCGCCGGTACCGCGGGAATCTTCCCCTGCCGGTTCGCTCCCCTCCAGAGCGTCTCACTCCCCTCGCGCTGTACATACTCCCCCTGAAGACGTGCTGCCCGAGGACAAAATTAAGGCTGAAACCGAAGACGACCGGTGGGAGTACTGA
Protein Sequence
MLFINQLLNSSGGHCASAQRQYVDRMNVGTKDGTIGAGFGRPDGDGDDRLAHILNEMKHPMGQQSNDDSRSNDDSCSPRTQCPSPFSKDSSQNRRLKKYENDDIPQEKVVRIYQEELAKIMSKRVEDMRHNREGFHGMFPPFFSGGMPPHMERPPEDIRMALEAYHRELAKIQPGGNIPNLHNMPGMPPFPNILALQQQAMHQAQNHHVNGSGAIQDLSLPKEKSAKINGMTDSDKDKPIDAEEAIRHAGSAFSLVRPKLEPGSHQSTGSSASSPLGNTILPPAITPNDDFNSSAAASPLQRMASITNSLISQPTNPPHHNPPQRSMKAVLPPITQQQFDLFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPPCPPNMNLNKPMPPTHKMLSDASHLLSKMQQEQLLPGHLGPLGQPPPLLLTPPGFPPHHAVTLPPQHHDNNNKERKPPPPPPHHQPPIMRSLHQHISPSVYEMAALTHDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTSGVPSAKKQRVLFSEEQKEALRLAFALDPYPNTPTIEFLAAELGLSTRTITNWFHNHRMRLKQQAPHGLPAEPPARDQSSAPFQPAQFRLLLNQRLLELQKERMGLGSVPLPYPPFFAANPNLAALIGHGLIPSEEQVKDQTSGLDLSMPLKREPDGDDFDDDDVESNLGSDDSLDDGESKSEPKMTSTPASRSNRRKPAAPQWVNPDWQDEKGRNPDEVIINGVCVMRGNDYRREAEETVLVEPSPVPRESSPAGSLPSRASHSPRAVHTPPEDVLPEDKIKAETEDDRWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01451353;
90% Identity
iTF_01451259;
80% Identity
iTF_01041637;