Nkoe002309.1
Basic Information
- Insect
- Nemapogon koenigi
- Gene Symbol
- Jarid2
- Assembly
- GCA_963924495.1
- Location
- OZ004630.1:274140-287359[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.7e-20 2.6e-16 60.3 0.1 6 89 651 731 647 731 0.92 2 2 2.4 6.4e+03 -1.8 0.0 61 84 813 835 800 837 0.63
Sequence Information
- Coding Sequence
- atGAAACGCAAGGTGCAGGCCCAGAGGAAATTCGCCCAGGGTGTATACATTCCTCCCATGAGTGAGAGAAGAAATGACAGAACACCACAGAAAGATCAAGTGCAACCAGAGAAGACAGCTGTATCaactttatttaatacaaaagtATCTAGCTTGTTGGATGTGGTCACCTTTCAAAATATTCACAAACACAAACCACATTGTGTGGTTGTTTTAGAGAGATTGCAAAATAAGTGTTTGTCAGTAGAAAGGTCTGATGTAGAACTCCAGATGAATGGACACACTCCGACCAGTCTAGGTACGGTCAGGAGGGAGGAGAGACTCTCTGATGTTATACCACCAACTCTAGTTGAATCTCCTGGCCGGAAGAACAAACTTAATCAAATAAAGACAAATAACTCAGTACAAATACAGAGAAAATCAGTTCTACAAACAACATTTAAAAAGGCAAACAATATGAAAATGAGAAAGAAAAGAAATGGACTACCTGCCATCCCTTCTCCACAAaaagaaaaacttaaaaaaaaaccaaaaccaaAACTGACAATCAAAAAAGATGTTAAAAGCAAATTTATAAAACCTACATTACGTgctgtaaaaaaaactaatatgaaACCACTGCCGAGCCCCATGTCTCGCGAAAGGTTGAAGAGAAAGGTCACAGCCCTTTCTAAAGTAGGATATGATTCTTCTACAGATGATGACCAACCCCTCAAACAGttatatttgcataaaaataaaataaagatattaaagaagaaaatattgaaaaggaAATTGCGAGATCACTCTCTGAAGAATAAACCATTGACAAGGTCTGCTTCAAAACGAAAATGTGACAGCCAGAAGAAAGATGACaaacctaaaattaaaaaagttgtaACAAGTGATATACAAGCAGGCGCTACCAAACAACCGGAGACTGAAAACAGCCTGTACAGCGGTAGTAACATAGAAGAGTGGGTCGACAAGACCGTCTCCACCGTCACGAAGCAGACTGCAGAGTTTGTCAAACCGAAGGTATCGGTAAATGTGTCCCCGAAGgcatctattttaaaaaaacctttaaaaaagaAGGCCAGATTGAGCAGCGACAAGGACAAGCTCCTGGCGGCCACCCGTGACAAAGAGGTCTGCCACAAGGCACAGTCGCCGTGCTCTTCCTCCATATTTCAGAGCATCTCCAACTTGGAAGACACGGCCAACATCAACATAGCTGACTGCTGCAAGAAGTGTAGCAACTGCGAGATCCTGAAGGTCATCTTCGACAACAAGAGTAACGCGAGTGAGGACGTGTATACGTTCGACCCAGAGCTGGAGATGGCGGCGGGCCCAGCACAGTACCGCCCGCGACAACCCAGCAAGAGCCGCGCCGACGAGCATCACTGTCTCTATCTAGACATGTTCGACGATTGCTGGCCTTACCTTGTGCAGATCGTCAAGGTGTTCACTCAAGACAACCGCGTGATCCGCGCTCGCGTCGTGCCCAAGTCTGACGTGGACAAGACACTCATCACCAAATGCTCCGAGGACCTCAGTCTCTACCTCAATCAGGCCAACTTCTTGAAAGATGTCTTGAACAATTTCACAAACTCCGCCGCTAAAGCTGTTGCGGATGATGCACACGAGCGTGTCAAAGATAAGCCAATAAAAAAACCGGACAAGCGACCGCGCAAGTCAGACACGCACGTGCAGGGAGCGTTCCCGAAACCCTCCGAGAACGGCAGGATGGTTGACGCACCTGTCTTCAGGCCGACACAGGAGGAGTTCGAGaaCGCATTGGAGTACATAGAGAAGATCCGGCCCGAGGCCGAGAAGTTCGGTCTGTGTAAGATAGTCCCGCCGGCCGGGTTTACCCCCACATGTGTGCCGCCCGATGACCTCAGTTTCTTGTCGACCAACCAGTACATATGCAAGATGTACATGCGGTGGGCCGCGGCGTCGCGCGAGATGTGCGCCATCAAGTCTCATCTAGCCACACAGAACGTCATCTTTAAGAGGGCTCCCCTGATAGACGGAGTAGAAGTGAACCTAGCCAAGTTGTACAATCTCGTACAGCGTAGTGGGGGTCTCAAGGTGGTGCTGCAAAAGAAGAAGTGGACCAAGATCGCTGAAGAGATGAACTACGGCTGCTCTCCCAAGATAGAGAAGAAGTTGGACAACACATACGTCAAGTATGTACTGCCCTACGACACGCTAACTAACAATGAACGCCAAGAGATAATGAAGAAGGTGGAGACACAATGGAACAAACGGTTTTCCAAGATGTTGAAGAGAGCCAGGAACCCTCTCCATCGACAGAAGAGACTGCTCGGTGAATCGTCTTCTGAAGATGAAGAGGAAGAGAGCGGAGAGAGCTGCTTGGACGAGGCAGAAGATTGTGTGGTGCCAGGACGTACCATGAACCTGCATACTTTTAAGAAGATAGCGGCCCGCACGATGGACATCCAGTTCCCGCAGCAGCAGCCGTCTGCCACTCAAGTGGAGCAGGCGTACTGGCAACACGTGATGTTCGGGCACGACCATATCTGTGTCAACACCGCCTCCATAGACACGGGCGAGAAGGGGTACGGCTTCACAAAGACCAAGAACGACCCGTACTCCAAGCATCCCTGGAATCTCAAGGTGCTGAGCAACAGTAGCGGCTCTATCCTCCGGTCGATGGGTCCCGTGTTGAGTGTGACGGTGCCCACTCTCCACCTCGGGATGTTGTTCGCTACCTCGTGCTGGCACAAGGACCCGCACGGTCTGCCCTGGATCGAGTACCTGCATGAGGGCTCCTCTAAGATATGGTACGGCATTCCTGACGAGCAGAGCGAGAAGTTCAGAAAGGCCGTGGAGACCCTGGCTCCGGCCTACTGCCAGAACAAGGGCATCTGGCTGCCGTCCGACATCGCAATGTTCCCCCCGCAGCTTCTACTTGACAACCACGTGAGCCTGTCCAAGACCCACCAGGAGGCCGGCCAGTACATCGTGGTGTTCCCGAAGGCCTACAGCTCGTCTGTGTGCACGGGGTTCTGTGTCTCGGAGAGTATCTACTTCGCGCCCTCCAGCTGGCTCAGTACTATGCAATCTCATTTTCAGGAGGTACGAGAGAGTTGCGAGCCCACCATGTTCCCGTTGGAGCGGCTGCTAGTAGCGCTGTGTGGGGAGCCGCGCGCTGCCCGCTCTCTGTTGCTGCAGGTGCACAACGCGCTCGACATAGCCGCACACGACGAGCGGGCGCTCAGGCTCAAGCTGCGGGCGCTGGGGGTGCCGGTACAAGAAATAAAAGTACAGACCAAAAAGAAGTGGAACTACTCGTGGAACGTGGGCGAGCACACAGAGTGTGACATCTGTAGGAAGACTCTCTATCTCTCTAAGGTGTCGGGCGTGACCAACAAGAAGTCGGACTTGTGTCTGCCGCACGCGCTCCGCTTGTTGGAGATGAGGTCCTCCTCCGAGATGGCCGAGCTGAACAAGAATATTAGTCTCATCTGTTTCTACACCGACGACGCGCTCGACGACATCATCATGTCTCTCCGGGCCAGGATTCAGGAGAGCTAG
- Protein Sequence
- MKRKVQAQRKFAQGVYIPPMSERRNDRTPQKDQVQPEKTAVSTLFNTKVSSLLDVVTFQNIHKHKPHCVVVLERLQNKCLSVERSDVELQMNGHTPTSLGTVRREERLSDVIPPTLVESPGRKNKLNQIKTNNSVQIQRKSVLQTTFKKANNMKMRKKRNGLPAIPSPQKEKLKKKPKPKLTIKKDVKSKFIKPTLRAVKKTNMKPLPSPMSRERLKRKVTALSKVGYDSSTDDDQPLKQLYLHKNKIKILKKKILKRKLRDHSLKNKPLTRSASKRKCDSQKKDDKPKIKKVVTSDIQAGATKQPETENSLYSGSNIEEWVDKTVSTVTKQTAEFVKPKVSVNVSPKASILKKPLKKKARLSSDKDKLLAATRDKEVCHKAQSPCSSSIFQSISNLEDTANINIADCCKKCSNCEILKVIFDNKSNASEDVYTFDPELEMAAGPAQYRPRQPSKSRADEHHCLYLDMFDDCWPYLVQIVKVFTQDNRVIRARVVPKSDVDKTLITKCSEDLSLYLNQANFLKDVLNNFTNSAAKAVADDAHERVKDKPIKKPDKRPRKSDTHVQGAFPKPSENGRMVDAPVFRPTQEEFENALEYIEKIRPEAEKFGLCKIVPPAGFTPTCVPPDDLSFLSTNQYICKMYMRWAAASREMCAIKSHLATQNVIFKRAPLIDGVEVNLAKLYNLVQRSGGLKVVLQKKKWTKIAEEMNYGCSPKIEKKLDNTYVKYVLPYDTLTNNERQEIMKKVETQWNKRFSKMLKRARNPLHRQKRLLGESSSEDEEEESGESCLDEAEDCVVPGRTMNLHTFKKIAARTMDIQFPQQQPSATQVEQAYWQHVMFGHDHICVNTASIDTGEKGYGFTKTKNDPYSKHPWNLKVLSNSSGSILRSMGPVLSVTVPTLHLGMLFATSCWHKDPHGLPWIEYLHEGSSKIWYGIPDEQSEKFRKAVETLAPAYCQNKGIWLPSDIAMFPPQLLLDNHVSLSKTHQEAGQYIVVFPKAYSSSVCTGFCVSESIYFAPSSWLSTMQSHFQEVRESCEPTMFPLERLLVALCGEPRAARSLLLQVHNALDIAAHDERALRLKLRALGVPVQEIKVQTKKKWNYSWNVGEHTECDICRKTLYLSKVSGVTNKKSDLCLPHALRLLEMRSSSEMAELNKNISLICFYTDDALDDIIMSLRARIQES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -